Literature DB >> 26614659

Mathematical models for explaining the Warburg effect: a review focussed on ATP and biomass production.

Stefan Schuster1, Daniel Boley2, Philip Möller3, Heiko Stark4, Christoph Kaleta5.   

Abstract

For producing ATP, tumour cells rely on glycolysis leading to lactate to about the same extent as on respiration. Thus, the ATP synthesis flux from glycolysis is considerably higher than in the corresponding healthy cells. This is known as the Warburg effect (named after German biochemist Otto H. Warburg) and also applies to striated muscle cells, activated lymphocytes, microglia, endothelial cells and several other cell types. For similar phenomena in several yeasts and many bacteria, the terms Crabtree effect and overflow metabolism respectively, are used. The Warburg effect is paradoxical at first sight because the molar ATP yield of glycolysis is much lower than that of respiration. Although a straightforward explanation is that glycolysis allows a higher ATP production rate, the question arises why cells do not re-allocate protein to the high-yield pathway of respiration. Mathematical modelling can help explain this phenomenon. Here, we review several models at various scales proposed in the literature for explaining the Warburg effect. These models support the hypothesis that glycolysis allows for a higher proliferation rate due to increased ATP production and precursor supply rates.
© 2015 Authors; published by Portland Press Limited.

Entities:  

Keywords:  Warburg effect; cancer metabolism; metabolic modelling; rate vs. yield; respirofermentation

Mesh:

Substances:

Year:  2015        PMID: 26614659     DOI: 10.1042/BST20150153

Source DB:  PubMed          Journal:  Biochem Soc Trans        ISSN: 0300-5127            Impact factor:   5.407


  16 in total

Review 1.  The importance of controlling mRNA turnover during cell proliferation.

Authors:  Sebastián Chávez; José García-Martínez; Lidia Delgado-Ramos; José E Pérez-Ortín
Journal:  Curr Genet       Date:  2016-03-23       Impact factor: 3.886

Review 2.  Immunometabolism in early and late stages of rheumatoid arthritis.

Authors:  Cornelia M Weyand; Jörg J Goronzy
Journal:  Nat Rev Rheumatol       Date:  2017-03-31       Impact factor: 20.543

3.  Mitochondria: The Retina's Achilles' Heel in AMD.

Authors:  Deborah A Ferrington; M Cristina Kenney; Shari R Atilano; James B Hurley; Emily E Brown; John D Ash
Journal:  Adv Exp Med Biol       Date:  2021       Impact factor: 2.622

Review 4.  The role of glial cells in multiple sclerosis disease progression.

Authors:  Luke M Healy; Jo Anne Stratton; Tanja Kuhlmann; Jack Antel
Journal:  Nat Rev Neurol       Date:  2022-02-21       Impact factor: 44.711

5.  Therapeutic Approach of KRAS Mutant Tumours by the Combination of Pharmacologic Ascorbate and Chloroquine.

Authors:  Orsolya Kapuy; Kinga Makk-Merczel; András Szarka
Journal:  Biomolecules       Date:  2021-04-28

6.  Linear programming model can explain respiration of fermentation products.

Authors:  Philip Möller; Xiaochen Liu; Stefan Schuster; Daniel Boley
Journal:  PLoS One       Date:  2018-02-07       Impact factor: 3.240

7.  MicroRNA-33b inhibits cell proliferation and glycolysis by targeting hypoxia-inducible factor-1α in malignant melanoma.

Authors:  Yue Zhao; Cuiling Wu; Lina Li
Journal:  Exp Ther Med       Date:  2017-06-28       Impact factor: 2.447

8.  Microenvironmental cooperation promotes early spread and bistability of a Warburg-like phenotype.

Authors:  Jorge Fernandez-de-Cossio-Diaz; Andrea De Martino; Roberto Mulet
Journal:  Sci Rep       Date:  2017-06-08       Impact factor: 4.379

Review 9.  From elementary flux modes to elementary flux vectors: Metabolic pathway analysis with arbitrary linear flux constraints.

Authors:  Steffen Klamt; Georg Regensburger; Matthias P Gerstl; Christian Jungreuthmayer; Stefan Schuster; Radhakrishnan Mahadevan; Jürgen Zanghellini; Stefan Müller
Journal:  PLoS Comput Biol       Date:  2017-04-13       Impact factor: 4.475

10.  A mathematical framework for yield (vs. rate) optimization in constraint-based modeling and applications in metabolic engineering.

Authors:  Steffen Klamt; Stefan Müller; Georg Regensburger; Jürgen Zanghellini
Journal:  Metab Eng       Date:  2018-02-07       Impact factor: 9.783

View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.