Literature DB >> 26614339

Computational Analysis of Solvent Effects in NMR Spectroscopy.

Martin Dračínský1, Petr Bouř1.   

Abstract

Solvent modeling became a standard part of first principles computations of molecular properties. However, a universal solvent approach is particularly difficult for the nuclear magnetic resonance (NMR) shielding and spin-spin coupling constants that in part result from collective delocalized properties of the solute and the environment. In this work, bulk and specific solvent effects are discussed on experimental and theoretical model systems comprising solvated alanine zwitterion and chloroform molecules. Density functional theory computations performed on larger clusters indicate that standard dielectric continuum solvent models may not be sufficiently accurate. In some cases, more reasonable NMR parameters were obtained by approximation of the solvent with partial atomic charges. Combined cluster/continuum models yielded the most reasonable values of the spectroscopic parameters, provided that they are dynamically averaged. The roles of solvent polarizability, solvent shell structure, and bulk permeability were investigated. NMR shielding values caused by the macroscopic solvent magnetizability exhibited the slowest convergence with respect to the cluster size. For practical computations, however, inclusion of the first solvation sphere provided satisfactory corrections of the vacuum values. The simulations of chloroform chemical shifts and CH J-coupling constants were found to be very sensitive to the molecular dynamics model used to generate the cluster geometries. The results show that computationally efficient solvent modeling is possible and can reveal fine details of molecular structure, solvation, and dynamics.

Entities:  

Year:  2009        PMID: 26614339     DOI: 10.1021/ct900498b

Source DB:  PubMed          Journal:  J Chem Theory Comput        ISSN: 1549-9618            Impact factor:   6.006


  3 in total

1.  Stereochemistry of complex marine natural products by quantum mechanical calculations of NMR chemical shifts: solvent and conformational effects on okadaic acid.

Authors:  Humberto J Domínguez; Guillermo D Crespín; Adrián J Santiago-Benítez; José A Gavín; Manuel Norte; José J Fernández; Antonio Hernández Daranas
Journal:  Mar Drugs       Date:  2014-01-07       Impact factor: 5.118

2.  The potential utility of predicted one bond carbon-proton coupling constants in the structure elucidation of small organic molecules by NMR spectroscopy.

Authors:  Chandrasekhar Venkata; Mark J Forster; Peter W A Howe; Christoph Steinbeck
Journal:  PLoS One       Date:  2014-11-03       Impact factor: 3.240

3.  First-Principles Calculation of 1H NMR Chemical Shifts of Complex Metal Polyhydrides: The Essential Inclusion of Relativity and Dynamics.

Authors:  Abril C Castro; David Balcells; Michal Repisky; Trygve Helgaker; Michele Cascella
Journal:  Inorg Chem       Date:  2020-11-23       Impact factor: 5.165

  3 in total

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