Literature DB >> 26613475

Pulled Polymer Loops as a Model for the Alignment of Meiotic Chromosomes.

Yen Ting Lin1, Daniela Frömberg1, Wenwen Huang1, Petrina Delivani2, Mariola Chacón2, Iva M Tolić2,3, Frank Jülicher1, Vasily Zaburdaev1.   

Abstract

During recombination, the DNA of parents exchange their genetic information to give rise to a genetically unique offspring. For recombination to occur, homologous chromosomes need to find each other and align with high precision. Fission yeast solves this problem by folding chromosomes in loops and pulling them through the viscous nucleoplasm. We propose a theory of pulled polymer loops to quantify the effect of drag forces on the alignment of chromosomes. We introduce an external force field to the concept of a Brownian bridge and thus solve for the statistics of loop configurations in space.

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Year:  2015        PMID: 26613475     DOI: 10.1103/PhysRevLett.115.208102

Source DB:  PubMed          Journal:  Phys Rev Lett        ISSN: 0031-9007            Impact factor:   9.161


  5 in total

1.  Autonomous reciprocating migration of an active material.

Authors:  Lin Ren; Meng Wang; Changwei Pan; Qingyu Gao; Yang Liu; Irving R Epstein
Journal:  Proc Natl Acad Sci U S A       Date:  2017-07-31       Impact factor: 11.205

2.  Mathematical model of chromosomal dynamics during DNA double strand break repair in budding yeast.

Authors:  Shinjiro Nakahata; Tetsushi Komoto; Masashi Fujii; Akinori Awazu
Journal:  Biophys Physicobiol       Date:  2022-04-05

3.  Affinity of rhodopsin to raft enables the aligned oligomer formation from dimers: Coarse-grained molecular dynamics simulation of disk membranes.

Authors:  Yukito Kaneshige; Fumio Hayashi; Kenichi Morigaki; Yasushi Tanimoto; Hayato Yamashita; Masashi Fujii; Akinori Awazu
Journal:  PLoS One       Date:  2020-02-07       Impact factor: 3.240

4.  Diffusion and distal linkages govern interchromosomal dynamics during meiotic prophase.

Authors:  Trent A C Newman; Bruno Beltran; James M McGehee; Daniel Elnatan; Cori K Cahoon; Michael R Paddy; Daniel B Chu; Andrew J Spakowitz; Sean M Burgess
Journal:  Proc Natl Acad Sci U S A       Date:  2022-03-18       Impact factor: 11.205

5.  Ribosomal protein L5 facilitates rDNA-bundled condensate and nucleolar assembly.

Authors:  Haruka Matsumori; Kenji Watanabe; Hiroaki Tachiwana; Tomoko Fujita; Yuma Ito; Makio Tokunaga; Kumiko Sakata-Sogawa; Hiroko Osakada; Tokuko Haraguchi; Akinori Awazu; Hiroshi Ochiai; Yuka Sakata; Koji Ochiai; Tsutomu Toki; Etsuro Ito; Ilya G Goldberg; Kazuaki Tokunaga; Mitsuyoshi Nakao; Noriko Saitoh
Journal:  Life Sci Alliance       Date:  2022-03-23
  5 in total

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