Literature DB >> 26612079

ASAP (Automatic Software for ASL Processing): A toolbox for processing Arterial Spin Labeling images.

Virginia Mato Abad1, Pablo García-Polo2, Owen O'Daly3, Juan Antonio Hernández-Tamames4, Fernando Zelaya3.   

Abstract

The method of Arterial Spin Labeling (ASL) has experienced a significant rise in its application to functional imaging, since it is the only technique capable of measuring blood perfusion in a truly non-invasive manner. Currently, there are no commercial packages for processing ASL data and there is no recognized standard for normalizing ASL data to a common frame of reference. This work describes a new Automated Software for ASL Processing (ASAP) that can automatically process several ASL datasets. ASAP includes functions for all stages of image pre-processing: quantification, skull-stripping, co-registration, partial volume correction and normalization. To assess the applicability and validity of the toolbox, this work shows its application in the study of hypoperfusion in a sample of healthy subjects at risk of progressing to Alzheimer's disease. ASAP requires limited user intervention, minimizing the possibility of random and systematic errors, and produces cerebral blood flow maps that are ready for statistical group analysis. The software is easy to operate and results in excellent quality of spatial normalization. The results found in this evaluation study are consistent with previous studies that find decreased perfusion in Alzheimer's patients in similar regions and demonstrate the applicability of ASAP.
Copyright © 2015 Elsevier Inc. All rights reserved.

Entities:  

Keywords:  Alzheimer's disease; Arterial Spin Labeling; Automatic processing; Cerebral blood flow; Partial volume effect

Mesh:

Substances:

Year:  2015        PMID: 26612079     DOI: 10.1016/j.mri.2015.11.002

Source DB:  PubMed          Journal:  Magn Reson Imaging        ISSN: 0730-725X            Impact factor:   2.546


  12 in total

1.  ASL-MRICloud: An online tool for the processing of ASL MRI data.

Authors:  Yang Li; Peiying Liu; Yue Li; Hongli Fan; Pan Su; Shin-Lei Peng; Denise C Park; Karen M Rodrigue; Hangyi Jiang; Andreia V Faria; Can Ceritoglu; Michael Miller; Susumu Mori; Hanzhang Lu
Journal:  NMR Biomed       Date:  2018-12-26       Impact factor: 4.044

2.  Delineation between different components of chronic pain using dimension reduction - an ASL fMRI study in hand osteoarthritis.

Authors:  D Keszthelyi; Q Aziz; J K Ruffle; O O'Daly; D Sanders; K Krause; S C R Williams; M A Howard
Journal:  Eur J Pain       Date:  2018-04-16       Impact factor: 3.931

3.  Altered glutamatergic response and functional connectivity in treatment resistant schizophrenia: the effect of riluzole and therapeutic implications.

Authors:  Toby Pillinger; Maria Rogdaki; Robert A McCutcheon; Pamela Hathway; Alice Egerton; Oliver D Howes
Journal:  Psychopharmacology (Berl)       Date:  2019-02-28       Impact factor: 4.530

4.  Oxytocin modulates hippocampal perfusion in people at clinical high risk for psychosis.

Authors:  Cathy Davies; Yannis Paloyelis; Grazia Rutigliano; Marco Cappucciati; Andrea De Micheli; Valentina Ramella-Cravaro; Umberto Provenzani; Mathilde Antoniades; Gemma Modinos; Dominic Oliver; Daniel Stahl; Silvia Murguia; Fernando Zelaya; Paul Allen; Sukhi Shergill; Paul Morrison; Steve Williams; David Taylor; Philip McGuire; Paolo Fusar-Poli
Journal:  Neuropsychopharmacology       Date:  2019-01-09       Impact factor: 7.853

5.  A pilot study exploring the effect of repetitive transcranial magnetic stimulation (rTMS) treatment on cerebral blood flow and its relation to clinical outcomes in severe enduring anorexia nervosa.

Authors:  Bethan Dalton; Erica Maloney; Samantha J Rennalls; Savani Bartholdy; Maria Kekic; Jessica McClelland; Iain C Campbell; Ulrike Schmidt; Owen G O'Daly
Journal:  J Eat Disord       Date:  2021-07-09

6.  Interactions between hippocampal activity and striatal dopamine in people at clinical high risk for psychosis: relationship to adverse outcomes.

Authors:  Gemma Modinos; Anja Richter; Alice Egerton; Ilaria Bonoldi; Matilda Azis; Mathilde Antoniades; Matthijs Bossong; Nicolas Crossley; Jesus Perez; James M Stone; Mattia Veronese; Fernando Zelaya; Anthony A Grace; Oliver D Howes; Paul Allen; Philip McGuire
Journal:  Neuropsychopharmacology       Date:  2021-05-03       Impact factor: 7.853

7.  Effects of N-acetylcysteine on brain glutamate levels and resting perfusion in schizophrenia.

Authors:  Grant McQueen; John Lally; Tracy Collier; Fernando Zelaya; David J Lythgoe; Gareth J Barker; James M Stone; Philip McGuire; James H MacCabe; Alice Egerton
Journal:  Psychopharmacology (Berl)       Date:  2018-08-23       Impact factor: 4.530

8.  Modulation of anterior cingulate cortex reward and penalty signalling in medication-naive young-adult subjects with depressive symptoms following acute dose lurasidone.

Authors:  Selina A Wolke; Mitul A Mehta; Owen O'Daly; Fernando Zelaya; Nada Zahreddine; Hanna Keren; Georgia O'Callaghan; Allan H Young; Ellen Leibenluft; Daniel S Pine; Argyris Stringaris
Journal:  Psychol Med       Date:  2019-01-04       Impact factor: 7.723

9.  Effects of route of administration on oxytocin-induced changes in regional cerebral blood flow in humans.

Authors:  D A Martins; N Mazibuko; F Zelaya; S Vasilakopoulou; J Loveridge; A Oates; S Maltezos; M Mehta; S Wastling; M Howard; G McAlonan; D Murphy; S C R Williams; A Fotopoulou; U Schuschnig; Y Paloyelis
Journal:  Nat Commun       Date:  2020-03-03       Impact factor: 14.919

10.  Different patterns of cerebral perfusion in SLE patients with and without neuropsychiatric manifestations.

Authors:  Zhizheng Zhuo; Li Su; Yunyun Duan; Jing Huang; Xiaolu Qiu; Sven Haller; Haiyun Li; Xiaofeng Zeng; Yaou Liu
Journal:  Hum Brain Mapp       Date:  2019-10-24       Impact factor: 5.038

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