| Literature DB >> 26608663 |
Long Jiang1, Li-Yuan Sun1,2, Yan-Fang Dai1, Shi-Wei Yang1, Feng Zhang3,4, Lu-Ya Wang1.
Abstract
Familial hypercholesterolemia (FH) is a common and serious dominant genetic disease, and its main pathogenic gene is the low-density lipoprotein receptor (LDLR) gene. This study aimed to perform a systematic review of LDLR mutations in China. Using PubMed, Embase, Wanfang (Chinese), the Chinese National Knowledge Infrastructure (Chinese), and the Chinese Biological and Medical database (Chinese), public data were limited to December 2014. The Medical Subject Headings terms and the following key words were used: "familial hypercholesterolemia", "Chinese", "China", "Hong Kong", and "Taiwan". A total of 74 studies including 295 probands with 131 LDLR mutations were identified. Most of the mutations were located in exon 4 of LDLR and approximately 60% of the mutations were missense mutations. Thirty new mutations that were not recorded in the LDLR databases were found. In silico analysis revealed that most of the mutations were pathogenic. The primary LDLR mutations were C308Y, H562Y, and A606T, and all of the mutations had functional significance. Prevalence data suggest that there are nearly 3.8 million FH patients in China, although reported numbers are much smaller, suggesting that FH is widely misunderstood. This systematic review provides information that is specific to China for inclusion in the international FH database.Entities:
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Year: 2015 PMID: 26608663 PMCID: PMC4660303 DOI: 10.1038/srep17272
Source DB: PubMed Journal: Sci Rep ISSN: 2045-2322 Impact factor: 4.379
Figure 1Flow chart of the study selection.
Figure 2Distribution of Chinese LDLR mutations.
Characteristics of the primary mutations in China.
| Group | Primary Mutations | Regional distribution in China | Also found in | ||||
|---|---|---|---|---|---|---|---|
| Exon | cDNA | Protein | Probands | Function | |||
| Group 1 | E7 | c.986G > A | p.C308Y (Cys329Tyr) | 26 | 31% LDLR activity in transfected COS cells | Beijing, Guangdong Province, Taiwan Province, Hong Kong | Russia |
| E12 | c.1747C > T | p. H562Y (His583Tyr) | 23 | Precursor accumulates; approximately 50% mature protein | Jiangsu Province, Shanghai, Taiwan Province | Philippines | |
| E13 | c.1879G > A | p. A606T (Ala627Thr) | 19 | bind LDL slow processing recycling defective | Anhui Province, Beijing, Henan Province, Hebei Province, Hubei Province, Jiangsu Province, Taiwan Province, Hong Kong | NA | |
| Group 2 | E13 | c.1879G > A | p. A606T (Ala627Thr) | 13 | bind LDL slow processing recycling defective | Anhui Province, Beijing, Henan Province, Hebei Province, Hubei Province, Jiangsu Province | NA |
| E10 | c.1448G > A | p. W462X (Trp483X) | 10 | 17% LDLR binding and 39% internalization activity in transfected 293T cells | Anhui Province, Guangdong Province, Hubei Province, Jiangsu Province, Zhejiang Province | Austria | |
| E13 | c.1864G > T | p. D601Y (Asp622Tyr) | 6 | 13.6% LDLR expression and 21.1% binding activity in peripheral blood lymphocytes from patients | Anhui Province, Beijing, Hubei Province, Shanxi Province | NA | |
*Group 1 included Hong Kong, Taiwan Province and mainland China; Group 2 only included mainland China.
Figure 3Frequencies of the main LDLR mutations in different regions of China.
Characteristics of mutations that were not recorded in LDLR databases and in silico predictions.
| Exon | cDNA | Protein | position | PhlyPhen−2 (Hum Div) | PhlyPhen−2 (Hum Var) | SIFT | Mutation Taster | Overall | LDLR Activity* |
|---|---|---|---|---|---|---|---|---|---|
| E1 | C.−44C > T | NA | |||||||
| E1 | 64delG | 11089612 | Disease causing | Pathogenic | NA | ||||
| E3 | 310T > C | C83R | 11102783 | Probably Damaging | Probably Damaging | Damaging | Disease causing | Pathogenic | NA |
| E4 | c.383G > A | C107Y | 11105289 | Probably Damaging | Probably Damaging | Damaging | Disease causing | Pathogenic | NA |
| E4 | c.385G > T | D108Y | 11105291 | Probably Damaging | Probably Damaging | Damaging | Disease causing | Pathogenic | NA |
| E4 | c.444T > A | C127X | 11105350 | Disease causing | Pathogenic | NA | |||
| E4 | 551_553delGTAinsTT | Pathogenic | NA | ||||||
| E6 | c.889delA | 11107463 | Disease causing | Pathogenic | 14% LDLR activity in peripheral blood lymphocytes from HoFH patients | ||||
| E6 | c.890A > C | N276T | 11107464 | Possibly Damaging | Possibly Damaging | Damaging | Disease causing | Pathogenic | NA |
| E6 | c.892delA | 11107466 | Disease causing | Pathogenic | NA | ||||
| E7 | c.1054 T > A | C331S | 11110765 | Probably Damaging | Probably Damaging | Damaging | Disease causing | Pathogenic | NA |
| E8 | c.1100 T > A | L346H | 11111553 | Possibly Damaging | Possibly Damaging | Damaging | Disease causing | Pathogenic | NA |
| E8 | c.1129 T > G | C356G | 11111582 | Pathogenic | 57% LDLR binding and 52% internalization activity in transfected 293T cells | ||||
| E9 | c.1304A > G | E414G | 11113395 | Probably Damaging | Probably Damaging | Damaging | Disease causing | Pathogenic | NA |
| E9 | c.1329delG | 11113420 | Disease causing | Pathogenic | NA | ||||
| E10 | c.1439C > T | A459V | 11113615 | Pathogenic | 39% LDLR expression, 63% binding and 76% internalization activity in peripheral blood lymphocytes from HoFH patients | ||||
| E10 | c.1544A > G | N494S | 11113720 | Bening | Bening | Tolerated | Polymorphism | Non-pathogenic | NA |
| Intron10 | c.1586 + 1 G > T | NA | |||||||
| Intron10 | c.1586 + 5 G > C | NA | |||||||
| E11 | c.1592T > A | M510K | 11116099 | Pathogenic | 31.6% LDLR binding and 36.2% internalization activity in transfected COS-7 cells | ||||
| E11 | c.1597T > C | W512R | 11116104 | Pathogenic | 0–6% LDLR activity in transfected COS cells | ||||
| E11 | c.1661C > T | S533L | 11116168 | Possibly Damaging | Bening | Tolerated | Polymorphism | Non-pathogenic | NA |
| E12 | c.1757C > A | S565X | 11116910 | Disease causing | Pathogenic | 16% LDLR binding and 19% internalization activity in transfected 293T cells | |||
| E13 | c.1849A > G | K596E | 11120092 | Bening | Bening | Damaging | Disease causing | Pathogenic | NA |
| E13 | c.1864G > T | D601Y | 11120110 | Pathogenic | 13.6% LDLR expression and 21.1% binding activity in peripheral blood lymphocytes from patients | ||||
| E13 | c.1877A > G | E605G | 11120123 | Possibly Damaging | Possibly Damaging | Damaging | Disease causing | Pathogenic | NA |
| E14 | c.2021A > G | N653S | 11120403 | Bening | Bening | Damaging | Disease causing | Pathogenic | NA |
| E14 | c.2075C > G | P671G | 1120457 | Probably Damaging | Probably Damaging | Damaging | Disease causing | Pathogenic | NA |
| E17 | 2400insG | 11129563 | Disease causing | Pathogenic | NA | ||||
| E17 | c.2443C > T | L794F | 11129566 | Pathogenic | Normal LDLR binding, but 3% internalization activity in skin fibroblast from homozygous FH |
All references are showed in supplemental table S1. *Only be reported in China.
Clinical features and blood lipid values of FH in different countries.
| Countries | TC(mmol/L) | LDL-C (mmol/L) | TG(mmol/L) | HDL-C (mmol/L) | Xanthomata (%) | Corneal arcus(%) | CVD(%) |
|---|---|---|---|---|---|---|---|
| Taiwan Province | 9.1 | 6.83 | 1.31 | 1.45 | 23.5 | NA | 24.5 |
| Hong Kong | 9.41 | 7.49 | 1.3 | 1.35 | 50 | 49.1 | 13 |
| Japan | 8.4 | 6.4 | 1.49 | 1.22 | 87 | 38 | 24 |
| Malaysian | 7.7 | 5.1 | 1.9 | 1.3 | 50.6 | 50.6 | 80.5 |
| Australia | 6.46 | 4.42 | 1.2 | 1.3 | 18.6 | 26.1 | 9.6 |
| Netherlands | 5.97 | 4.13 | 1.1 | 1.2 | NA | NA | 9.2 |
| UK | 10.26 | 4.69 | 1.34 | 1.36 | 28.6 | 16.7 | 19.4 |
| Spain | 10.79 | 8.68 | 1.2 | 1.34 | 28.5 | NA | 21.9 |
| Mainland China (1998) | 6.09 | 4.35 | 1.23 | 1.32 | 0 | NA | 0 |
All lipid value were used as average value in each studies. CVD, cardiovascular disease; HDL-C, high density lipoprotein-cholesterol; LDL-C, low density lipoprotein-cholesterol; TC, total cholesterol; TG, triglyceride.
*Treated lipid values.
Relationship between mutations and clinical phenotypes.
| Homozygous FH | Compound Heterozygous FH | Heterozygous FH | Mutation (−) | Heterozygous but Clinical Homozygous FH | |
|---|---|---|---|---|---|
| Numbers | 42 | 19 | 285 | 18 | 6 |
| Ages | 18.3 ± 14.9 | 13 ± 11 | 39.9 ± 16.3 | 35.8 ± 13.8 | 18.8 ± 18.5 |
| Male (%) | 45.2% | 57.9% | 48.4% | 66.7% | 50% |
| Corneal arcus (%, n/N) | 76.5% (13/17) | 57.1% (4/7) | 34.8% (23/66) | 11.1% (1/9) | 0 (1) |
| Xanthoma (%, n/N) | 95% (38/40) | 100% (19/19) | 31.6% (54/171) | 50% (9/18) | 100% (5/5) |
| CVD (%, n/N) | 57.1% (20/35) | 57.9% (11/19) | 22.2% (37/167) | 11.1% (2/18) | 20% (1/5) |
| TC (mmol/L, n/N) | 17.47 ± 4.2 (42/42) | 15.87 ± 4.27 (19/19) | 8.21 ± 2.02 (285/285) | 9.47 ± 4.06 (18/18) | 18.03 ± 4.75 (6/6) |
| LDL-C (mmol/L, n/N) | 15.02 ± 4.63 (38/42) | 13.07 ± 3.29 (19/19) | 6.17 ± 1.91 (245/285) | 7.83 ± 4.12 (18/18) | 15.93 ± 3.6 (6/6) |
| TG (mmol/L, n/N) | 1.3 ± 0.67 (34/42) | 1.25 ± 0.63 (17/19) | 1.53 ± 1.07 (239/285) | 1.24 ± 0.45 (18/18) | 1.61 ± 0.72 (5/6) |
| HDL (mmol/L, n/N) | 1.14 ± 0.42 (36/42) | 1.28 ± 0.63 (19/19) | 1.37 ± 0.69 (223/285) | 1.16 ± ± 0.32 (18/18) | 0.65 ± 0.27 (5/6) |
n: the number of patients with recorded information; N: all the patients of each group.
*this group included patients which showed clinical homozygous phenotype but were genetically heterozygous.