Literature DB >> 26608472

The rate of RNA degradation in human dental pulp reveals post-mortem interval.

Viktor S Poór1, Dénes Lukács2, Tamás Nagy3, Evelin Rácz1, Katalin Sipos4.   

Abstract

Post-mortem interval (PMI) is the amount of time elapsed since the time of death. Over the years, many methods were developed to assess PMI, but their precision and time frame of applicability are often limited. Our present pilot study aimed to prove if RNA degradation of human dental pulp can be used for PMI estimation. RNA was isolated from the pulps of healthy wisdom teeth and premolars. RNA degradation was determined as RNA integrity number (RIN) with Agilent Bioanalyzer and subsequently by amplification of different length products by PCR after reverse transcription. The RNA integrity analysis allowed us to determine the time of post-mortem interval with high confidence level in the first 21 days. With the PCR-based method, we were able to perform a crude estimation of incubation time of teeth between 20 and 42 days post extraction. These results show that this method might be a promising new tool for PMI estimation despite the limitations.

Entities:  

Keywords:  Forensic dentistry; Microfluidics; Nucleic acids; Polymerase chain reaction

Mesh:

Substances:

Year:  2015        PMID: 26608472     DOI: 10.1007/s00414-015-1295-y

Source DB:  PubMed          Journal:  Int J Legal Med        ISSN: 0937-9827            Impact factor:   2.686


  14 in total

1.  Quantification of RNA degradation by semi-quantitative duplex and competitive RT-PCR: a possible indicator of the age of bloodstains?

Authors:  Martin Bauer; Silke Polzin; Dieter Patzelt
Journal:  Forensic Sci Int       Date:  2003-12-17       Impact factor: 2.395

2.  Odontoblast RNA stability in different temperature-based protocols for tooth storage.

Authors:  M C M Conde; F Nedel; V F Campos; A J Smith; J E Nör; F F Demarco; S B C Tarquinio
Journal:  Int Endod J       Date:  2011-12-19       Impact factor: 5.264

3.  Identification of menstrual blood by real time RT-PCR: technical improvements and the practical value of negative test results.

Authors:  Martin Bauer; Dieter Patzelt
Journal:  Forensic Sci Int       Date:  2007-06-01       Impact factor: 2.395

4.  mRNA profiling for body fluid identification by reverse transcription endpoint PCR and realtime PCR.

Authors:  C Haas; B Klesser; C Maake; W Bär; A Kratzer
Journal:  Forensic Sci Int Genet       Date:  2008-12-25       Impact factor: 4.882

5.  The relative amounts of the cytoplasmic RNA species in normal, transformed and senescent cultured cell lines.

Authors:  L F Johnson; H T Abelson; S Penman; H Green
Journal:  J Cell Physiol       Date:  1977-03       Impact factor: 6.384

Review 6.  DNA profiling and forensic dentistry--a review of the recent concepts and trends.

Authors:  B C Manjunath; B R Chandrashekar; Melkundi Mahesh; R M Vatchala Rani
Journal:  J Forensic Leg Med       Date:  2011-03-23       Impact factor: 1.614

7.  Studies on RNA integrity and gene expression in human myocardial tissue, pericardial fluid and blood, and its postmortem stability.

Authors:  Lucas González-Herrera; Aurora Valenzuela; Juan A Marchal; José A Lorente; Enrique Villanueva
Journal:  Forensic Sci Int       Date:  2013-08-15       Impact factor: 2.395

8.  Forensic odontology, Part 1. Dental identification.

Authors:  J Hinchliffe
Journal:  Br Dent J       Date:  2011-03-12       Impact factor: 1.626

9.  The RIN: an RNA integrity number for assigning integrity values to RNA measurements.

Authors:  Andreas Schroeder; Odilo Mueller; Susanne Stocker; Ruediger Salowsky; Michael Leiber; Marcus Gassmann; Samar Lightfoot; Wolfram Menzel; Martin Granzow; Thomas Ragg
Journal:  BMC Mol Biol       Date:  2006-01-31       Impact factor: 2.946

10.  Long-term RNA persistence in postmortem contexts.

Authors:  Sarah L Fordyce; Marie-Louise Kampmann; Nienke L van Doorn; M Thomas P Gilbert
Journal:  Investig Genet       Date:  2013-04-23
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  10 in total

Review 1.  Analysis of RNA in the estimation of post-mortem interval: a review of current evidence.

Authors:  Salvatore Scrivano; Matteo Sanavio; Pamela Tozzo; Luciana Caenazzo
Journal:  Int J Legal Med       Date:  2019-07-18       Impact factor: 2.686

2.  DNA and RNA profiling of excavated human remains with varying postmortem intervals.

Authors:  M van den Berge; D Wiskerke; R R R Gerretsen; J Tabak; T Sijen
Journal:  Int J Legal Med       Date:  2016-09-14       Impact factor: 2.686

3.  Evaluating the potential of housekeeping genes, rRNAs, snRNAs, microRNAs and circRNAs as reference genes for the estimation of PMI.

Authors:  Chunyan Tu; Tieshuai Du; Chengchen Shao; Zengjia Liu; Liliang Li; Yiwen Shen
Journal:  Forensic Sci Med Pathol       Date:  2018-04-24       Impact factor: 2.007

4.  The Potential of Light Microscopic Features of the Oral Mucosa in Predicting Post-mortem Interval.

Authors:  Jagganath Patro; Swagatika Panda; Neeta Mohanty; Uma S Mishra
Journal:  Sultan Qaboos Univ Med J       Date:  2021-03-15

5.  Postmortem expression of apoptosis-related genes in the liver of mice and their use for estimation of the time of death.

Authors:  Peter A Noshy
Journal:  Int J Legal Med       Date:  2020-09-10       Impact factor: 2.686

6.  MALDI-TOF MS as a Novel Tool for the Estimation of Postmortem Interval in Liver Tissue Samples.

Authors:  Chengzhi Li; Zhengdong Li; Ya Tuo; Dong Ma; Yan Shi; Qinghua Zhang; Xianyi Zhuo; Kaifei Deng; Yijiu Chen; Zhenyuan Wang; Ping Huang
Journal:  Sci Rep       Date:  2017-07-07       Impact factor: 4.379

7.  Cell Death-Associated Ribosomal RNA Cleavage in Postmortem Tissues and Its Forensic Applications.

Authors:  Ji Yeon Kim; Yunmi Kim; Hyo Kyeong Cha; Hye Young Lim; Hyungsub Kim; Sooyoung Chung; Juck-Joon Hwang; Seong Hwan Park; Gi Hoon Son
Journal:  Mol Cells       Date:  2017-06-15       Impact factor: 5.034

8.  HIF1α protein and mRNA expression as a new marker for post mortem interval estimation in human gingival tissue.

Authors:  Paolo Fais; Maria Carla Mazzotti; Gabriella Teti; Rafael Boscolo-Berto; Susi Pelotti; Mirella Falconi
Journal:  J Anat       Date:  2018-03-05       Impact factor: 2.610

Review 9.  MicroRNAs as Useful Tools to Estimate Time Since Death. A Systematic Review of Current Literature.

Authors:  Aniello Maiese; Andrea Scatena; Andrea Costantino; Marco Di Paolo; Raffaele La Russa; Emanuela Turillazzi; Paola Frati; Vittorio Fineschi
Journal:  Diagnostics (Basel)       Date:  2021-01-03

10.  Are animal models predictive for human postmortem muscle protein degradation?

Authors:  Bianca Ehrenfellner; Angela Zissler; Peter Steinbacher; Fabio C Monticelli; Stefan Pittner
Journal:  Int J Legal Med       Date:  2017-07-18       Impact factor: 2.686

  10 in total

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