Literature DB >> 2660824

Physical studies of protein-DNA complexes by footprinting.

T D Tullius1.   

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Year:  1989        PMID: 2660824     DOI: 10.1146/annurev.bb.18.060189.001241

Source DB:  PubMed          Journal:  Annu Rev Biophys Biophys Chem        ISSN: 0883-9182


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  19 in total

1.  Nucleic acid fragmentation on the millisecond timescale using a conventional X-ray rotating anode source: application to protein-DNA footprinting.

Authors:  Arnon Henn; J Halfon; I Kela; I Orion; I Sagi
Journal:  Nucleic Acids Res       Date:  2001-12-15       Impact factor: 16.971

2.  Protein footprinting at cysteines: probing ATP-modulated contacts in cysteine-substitution mutants of yeast DNA topoisomerase II.

Authors:  B P Tu; J C Wang
Journal:  Proc Natl Acad Sci U S A       Date:  1999-04-27       Impact factor: 11.205

3.  A biotin interference assay highlights two different asymmetric interaction profiles for lambda integrase arm-type binding sites in integrative versus excisive recombination.

Authors:  Dane Hazelbaker; Marco A Azaro; Arthur Landy
Journal:  J Biol Chem       Date:  2008-03-04       Impact factor: 5.157

4.  Electrophoretic mobility shift assay (EMSA) for detecting protein-nucleic acid interactions.

Authors:  Lance M Hellman; Michael G Fried
Journal:  Nat Protoc       Date:  2007       Impact factor: 13.491

5.  Genome-wide footprinting: ready for prime time?

Authors:  Myong-Hee Sung; Songjoon Baek; Gordon L Hager
Journal:  Nat Methods       Date:  2016-03       Impact factor: 28.547

6.  Mode of interaction of the zinc finger protein TFIIIA with a 5S RNA gene of Xenopus.

Authors:  M E Churchill; T D Tullius; A Klug
Journal:  Proc Natl Acad Sci U S A       Date:  1990-07       Impact factor: 11.205

7.  Conformational alteration of Oct-1 upon DNA binding dictates selectivity in differential interactions with related transcriptional coactivators.

Authors:  V Misra; S Walter; P Yang; S Hayes; P O'Hare
Journal:  Mol Cell Biol       Date:  1996-08       Impact factor: 4.272

8.  Assembly of T-antigen double hexamers on the simian virus 40 core origin requires only a subset of the available binding sites.

Authors:  W S Joo; H Y Kim; J D Purviance; K R Sreekumar; P A Bullock
Journal:  Mol Cell Biol       Date:  1998-05       Impact factor: 4.272

Review 9.  Genomic footprinting.

Authors:  Jeff Vierstra; John A Stamatoyannopoulos
Journal:  Nat Methods       Date:  2016-03       Impact factor: 28.547

10.  Double-stranded cleavage of pBR322 by a diiron complex via a "hydrolytic" mechanism.

Authors:  L M Schnaith; R S Hanson; L Que
Journal:  Proc Natl Acad Sci U S A       Date:  1994-01-18       Impact factor: 11.205

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