Literature DB >> 26605730

Quantum Chemical Benchmarking, Validation, and Prediction of Acidity Constants for Substituted Pyridinium Ions and Pyridinyl Radicals.

John A Keith1, Emily A Carter1.   

Abstract

Sensibly modeling (photo)electrocatalytic reactions involving proton and electron transfer with computational quantum chemistry requires accurate descriptions of protonated, deprotonated, and radical species in solution. Procedures to do this are generally nontrivial, especially in cases that involve radical anions that are unstable in the gas phase. Recently, pyridinium and the corresponding reduced neutral radical have been postulated as key catalysts in the reduction of CO2 to methanol. To assess practical methodologies to describe the acid/base chemistry of these species, we employed density functional theory (DFT) in tandem with implicit solvation models to calculate acidity constants for 22 substituted pyridinium cations and their corresponding pyridinyl radicals in water solvent. We first benchmarked our calculations against experimental pyridinium deprotonation energies in both gas and aqueous phases. DFT with hybrid exchange-correlation functionals provide chemical accuracy for gas-phase data and allow absolute prediction of experimental pKas with unsigned errors under 1 pKa unit. The accuracy of this economical pKa calculation approach was further verified by benchmarking against highly accurate (but very expensive) CCSD(T)-F12 calculations. We compare the relative importance and sensitivity of these energies to selection of solvation model, solvation energy definitions, implicit solvation cavity definition, basis sets, electron densities, model geometries, and mixed implicit/explicit models. After determining the most accurate model to reproduce experimentally-known pKas from first principles, we apply the same approach to predict pKas for radical pyridinyl species that have been proposed relevant under electrochemical conditions. This work provides considerable insight into the pitfalls using continuum solvation models, particularly when used for radical species.

Entities:  

Year:  2012        PMID: 26605730     DOI: 10.1021/ct300295g

Source DB:  PubMed          Journal:  J Chem Theory Comput        ISSN: 1549-9618            Impact factor:   6.006


  5 in total

1.  Low-Molecular Pyrazine-Based DNA Binders: Physicochemical and Antimicrobial Properties.

Authors:  Paulina Mech-Warda; Artur Giełdoń; Anna Kawiak; Natalia Maciejewska; Mateusz Olszewski; Mariusz Makowski; Agnieszka Chylewska
Journal:  Molecules       Date:  2022-06-09       Impact factor: 4.927

2.  Optimal functionalization of a molecular electrocatalyst for hydride transfer.

Authors:  Shenzhen Xu; Emily A Carter
Journal:  Proc Natl Acad Sci U S A       Date:  2019-10-28       Impact factor: 11.205

Review 3.  Transition Metal Complexes as Catalysts for the Electroconversion of CO2 : An Organometallic Perspective.

Authors:  Niklas W Kinzel; Christophe Werlé; Walter Leitner
Journal:  Angew Chem Int Ed Engl       Date:  2021-01-19       Impact factor: 15.336

4.  When biomolecules meet 2-hydrazinopyrazine: from theory through experiment to molecular levels using a wide spectrum of techniques.

Authors:  Paulina Mech; Mariusz Makowski; Anna Kawiak; Agnieszka Chylewska
Journal:  RSC Adv       Date:  2020-11-09       Impact factor: 4.036

5.  CO2 capture by Mn(i) and Re(i) complexes with a deprotonated triethanolamine ligand.

Authors:  Hiroki Koizumi; Hiroyuki Chiba; Ayumi Sugihara; Munetaka Iwamura; Koichi Nozaki; Osamu Ishitani
Journal:  Chem Sci       Date:  2019-01-17       Impact factor: 9.825

  5 in total

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