Literature DB >> 26605684

Genome size diversity in angiosperms and its influence on gene space.

Steven Dodsworth1, Andrew R Leitch1, Ilia J Leitch2.   

Abstract

Genome size varies c. 2400-fold in angiosperms (flowering plants), although the range of genome size is skewed towards small genomes, with a mean genome size of 1C=5.7Gb. One of the most crucial factors governing genome size in angiosperms is the relative amount and activity of repetitive elements. Recently, there have been new insights into how these repeats, previously discarded as 'junk' DNA, can have a significant impact on gene space (i.e. the part of the genome comprising all the genes and gene-related DNA). Here we review these new findings and explore in what ways genome size itself plays a role in influencing how repeats impact genome dynamics and gene space, including gene expression.
Copyright © 2015 The Authors. Published by Elsevier Ltd.. All rights reserved.

Entities:  

Mesh:

Substances:

Year:  2015        PMID: 26605684     DOI: 10.1016/j.gde.2015.10.006

Source DB:  PubMed          Journal:  Curr Opin Genet Dev        ISSN: 0959-437X            Impact factor:   5.578


  17 in total

1.  The Application of Flow Cytometry for Estimating Genome Size, Ploidy Level Endopolyploidy, and Reproductive Modes in Plants.

Authors:  Jaume Pellicer; Robyn F Powell; Ilia J Leitch
Journal:  Methods Mol Biol       Date:  2021

2.  Uncovering the influence of genomic traits in shaping land plant diversity. A commentary on 'Are chromosome number and genome size associated with habit and environmental niche variables? Insights from the Neotropical orchids'.

Authors:  Jaume Pellicer
Journal:  Ann Bot       Date:  2022-07-19       Impact factor: 5.040

3.  Comparative analysis of repetitive sequences among species from the potato and the tomato clades.

Authors:  Paola Gaiero; Magdalena Vaio; Sander A Peters; M Eric Schranz; Hans de Jong; Pablo R Speranza
Journal:  Ann Bot       Date:  2019-02-15       Impact factor: 4.357

4.  Dating the Species Network: Allopolyploidy and Repetitive DNA Evolution in American Daisies (Melampodium sect. Melampodium, Asteraceae).

Authors:  Jamie Mccann; Tae-Soo Jang; Jiri Macas; Gerald M Schneeweiss; Nicholas J Matzke; Petr Novák; Tod F Stuessy; José L Villaseñor; Hanna Weiss-Schneeweiss
Journal:  Syst Biol       Date:  2018-11-01       Impact factor: 15.683

5.  Genomic reconfiguration in parasitic plants involves considerable gene losses alongside global genome size inflation and gene births.

Authors:  Peter Lyko; Susann Wicke
Journal:  Plant Physiol       Date:  2021-07-06       Impact factor: 8.340

6.  Genetic and environmental modulation of transposition shapes the evolutionary potential of Arabidopsis thaliana.

Authors:  Pierre Baduel; Basile Leduque; Amandine Ignace; Isabelle Gy; José Gil; Olivier Loudet; Vincent Colot; Leandro Quadrana
Journal:  Genome Biol       Date:  2021-05-06       Impact factor: 13.583

Review 7.  Genome Size Diversity and Its Impact on the Evolution of Land Plants.

Authors:  Jaume Pellicer; Oriane Hidalgo; Steven Dodsworth; Ilia J Leitch
Journal:  Genes (Basel)       Date:  2018-02-14       Impact factor: 4.096

8.  Whole-Genome Comparison Reveals Heterogeneous Divergence and Mutation Hotspots in Chloroplast Genome of Eucommia ulmoides Oliver.

Authors:  Wencai Wang; Siyun Chen; Xianzhi Zhang
Journal:  Int J Mol Sci       Date:  2018-03-30       Impact factor: 5.923

9.  Satellite DNA in Paphiopedilum subgenus Parvisepalum as revealed by high-throughput sequencing and fluorescent in situ hybridization.

Authors:  Yung-I Lee; Jing Wei Yap; Shairul Izan; Ilia J Leitch; Michael F Fay; Yi-Ching Lee; Oriane Hidalgo; Steven Dodsworth; Marinus J M Smulders; Barbara Gravendeel; Andrew R Leitch
Journal:  BMC Genomics       Date:  2018-08-02       Impact factor: 3.969

10.  DNA methylome analysis provides evidence that the expansion of the tea genome is linked to TE bursts.

Authors:  Lei Wang; Yan Shi; Xiaojun Chang; Shengli Jing; Qunjie Zhang; Chenjiang You; Hongyu Yuan; Haifeng Wang
Journal:  Plant Biotechnol J       Date:  2018-10-15       Impact factor: 9.803

View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.