Literature DB >> 26605615

Accurate Force Field Development for Modeling Conjugated Polymers.

Kateri H DuBay1, Michelle Lynn Hall1, Thomas F Hughes1, Chuanjie Wu2, David R Reichman1, Richard A Friesner1.   

Abstract

The modeling of the conformational properties of conjugated polymers entails a unique challenge for classical force fields. Conjugation imposes strong constraints upon bond rotation. Planar configurations are favored, but the concomitantly shortened bond lengths result in moieties being brought into closer proximity than usual. The ensuing steric repulsions are particularly severe in the presence of side chains, straining angles, and stretching bonds to a degree infrequently found in nonconjugated systems. We herein demonstrate the resulting inaccuracies by comparing the LMP2-calculated inter-ring torsion potentials for a series of substituted stilbenes and bithiophenes to those calculated using standard classical force fields. We then implement adjustments to the OPLS-2005 force field in order to improve its ability to model such systems. Finally, we show the impact of these changes on the dihedral angle distributions, persistence lengths, and conjugation length distributions observed during molecular dynamics simulations of poly[2-methoxy-5-(2'-ethylhexyloxy)-p-phenylene vinylene] (MEH-PPV) and poly 3-hexylthiophene (P3HT), two of the most widely used conjugated polymers.

Entities:  

Year:  2012        PMID: 26605615     DOI: 10.1021/ct300175w

Source DB:  PubMed          Journal:  J Chem Theory Comput        ISSN: 1549-9618            Impact factor:   6.006


  9 in total

1.  Predicting optical spectra for optoelectronic polymers using coarse-grained models and recurrent neural networks.

Authors:  Lena Simine; Thomas C Allen; Peter J Rossky
Journal:  Proc Natl Acad Sci U S A       Date:  2020-06-08       Impact factor: 11.205

2.  Impact of backbone fluorination on nanoscale morphology and excitonic coupling in polythiophenes.

Authors:  Zhongjian Hu; Ryan T Haws; Zhuping Fei; Pierre Boufflet; Martin Heeney; Peter J Rossky; David A Vanden Bout
Journal:  Proc Natl Acad Sci U S A       Date:  2017-05-02       Impact factor: 11.205

3.  Computationally assisted assignment of kahalalide Y configuration using an NMR-constrained conformational search.

Authors:  Mohamed A Albadry; Khaled M Elokely; Bin Wang; John J Bowling; Mohamed F Abdelwahab; Mohamed H Hossein; Robert J Doerksen; Mark T Hamann
Journal:  J Nat Prod       Date:  2013-01-30       Impact factor: 4.050

4.  General Force-Field Parametrization Scheme for Molecular Dynamics Simulations of Conjugated Materials in Solution.

Authors:  Jack Wildman; Peter Repiščák; Martin J Paterson; Ian Galbraith
Journal:  J Chem Theory Comput       Date:  2016-07-21       Impact factor: 6.006

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Authors:  Shalini Muralikumar; Umashankar Vetrivel; Angayarkanni Narayanasamy; Undurti N Das
Journal:  Lipids Health Dis       Date:  2017-01-21       Impact factor: 3.876

6.  Bleomycin modulates amyloid aggregation in β-amyloid and hIAPP.

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7.  Surface Reconstructions in Organic Crystals: Simulations of the Effect of Temperature and Defectivity on Bulk and (001) Surfaces of 2,2':6',2″-Ternaphthalene.

Authors:  Mosè Casalegno; Massimo Moret; Roland Resel; Guido Raos
Journal:  Cryst Growth Des       Date:  2015-12-02       Impact factor: 4.076

8.  Multilevel Precision-Based Rational Design of Chemical Inhibitors Targeting the Hydrophobic Cleft of Toxoplasma gondii Apical Membrane Antigen 1 (AMA1).

Authors:  Umashankar Vetrivel; Shalini Muralikumar; B Mahalakshmi; K Lily Therese; H N Madhavan; Mohamed Alameen; Indhuja Thirumudi
Journal:  Genomics Inform       Date:  2016-06-30

9.  A Molecular Dynamics Study of Monomer Melt Properties of Cyanate Ester Monomer Melt Properties.

Authors:  Rebecca T Haber; Andrea R Browning; Bayleigh R Graves; William P Davis; Jeffrey S Wiggins
Journal:  Polymers (Basel)       Date:  2022-03-17       Impact factor: 4.329

  9 in total

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