Literature DB >> 26602187

Structure of the Complex of Human Programmed Death 1, PD-1, and Its Ligand PD-L1.

Krzysztof M Zak1, Radoslaw Kitel2, Sara Przetocka1, Przemyslaw Golik1, Katarzyna Guzik3, Bogdan Musielak3, Alexander Dömling4, Grzegorz Dubin5, Tad A Holak6.   

Abstract

Targeting the PD-1/PD-L1 immunologic checkpoint with monoclonal antibodies has recently provided breakthrough progress in the treatment of melanoma, non-small cell lung cancer, and other types of cancer. Small-molecule drugs interfering with this pathway are highly awaited, but their development is hindered by insufficient structural information. This study reveals the molecular details of the human PD-1/PD-L1 interaction based on an X-ray structure of the complex. First, it is shown that the ligand binding to human PD-1 is associated with significant plasticity within the receptor. Second, a detailed molecular map of the interaction surface is provided, allowing definition of the regions within both interacting partners that may likely be targeted by small molecules.
Copyright © 2015 Elsevier Ltd. All rights reserved.

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Year:  2015        PMID: 26602187      PMCID: PMC4752817          DOI: 10.1016/j.str.2015.09.010

Source DB:  PubMed          Journal:  Structure        ISSN: 0969-2126            Impact factor:   5.006


  41 in total

1.  Checkpoint inhibitors for cancer immunotherapy. Multiple checkpoints on the long road towards cancer immunotherapy.

Authors:  Tri Giang Phan; Georgina V Long; Richard A Scolyer
Journal:  Immunol Cell Biol       Date:  2015-02-17       Impact factor: 5.126

2.  Tumor-infiltrating NY-ESO-1-specific CD8+ T cells are negatively regulated by LAG-3 and PD-1 in human ovarian cancer.

Authors:  Junko Matsuzaki; Sacha Gnjatic; Paulette Mhawech-Fauceglia; Amy Beck; Austin Miller; Takemasa Tsuji; Cheryl Eppolito; Feng Qian; Shashikant Lele; Protul Shrikant; Lloyd J Old; Kunle Odunsi
Journal:  Proc Natl Acad Sci U S A       Date:  2010-04-12       Impact factor: 11.205

Review 3.  Immune checkpoint blockade: a common denominator approach to cancer therapy.

Authors:  Suzanne L Topalian; Charles G Drake; Drew M Pardoll
Journal:  Cancer Cell       Date:  2015-04-06       Impact factor: 31.743

4.  Predictive correlates of response to the anti-PD-L1 antibody MPDL3280A in cancer patients.

Authors:  Roy S Herbst; Jean-Charles Soria; Marcin Kowanetz; Gregg D Fine; Omid Hamid; Michael S Gordon; Jeffery A Sosman; David F McDermott; John D Powderly; Scott N Gettinger; Holbrook E K Kohrt; Leora Horn; Donald P Lawrence; Sandra Rost; Maya Leabman; Yuanyuan Xiao; Ahmad Mokatrin; Hartmut Koeppen; Priti S Hegde; Ira Mellman; Daniel S Chen; F Stephen Hodi
Journal:  Nature       Date:  2014-11-27       Impact factor: 49.962

5.  Features and development of Coot.

Authors:  P Emsley; B Lohkamp; W G Scott; K Cowtan
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  2010-03-24

6.  Tumor antigen-specific CD8 T cells infiltrating the tumor express high levels of PD-1 and are functionally impaired.

Authors:  Mojgan Ahmadzadeh; Laura A Johnson; Bianca Heemskerk; John R Wunderlich; Mark E Dudley; Donald E White; Steven A Rosenberg
Journal:  Blood       Date:  2009-05-07       Impact factor: 22.113

7.  The presence of programmed death 1 (PD-1)-positive tumor-infiltrating lymphocytes is associated with poor prognosis in human breast cancer.

Authors:  S Muenst; S D Soysal; F Gao; E C Obermann; D Oertli; W E Gillanders
Journal:  Breast Cancer Res Treat       Date:  2013-06-12       Impact factor: 4.872

Review 8.  Scaling and assessment of data quality.

Authors:  Philip Evans
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  2005-12-14

9.  Structure and interactions of the human programmed cell death 1 receptor.

Authors:  Xiaoxiao Cheng; Vaclav Veverka; Anand Radhakrishnan; Lorna C Waters; Frederick W Muskett; Sara H Morgan; Jiandong Huo; Chao Yu; Edward J Evans; Alasdair J Leslie; Meryn Griffiths; Colin Stubberfield; Robert Griffin; Alistair J Henry; Andreas Jansson; John E Ladbury; Shinji Ikemizu; Mark D Carr; Simon J Davis
Journal:  J Biol Chem       Date:  2013-02-15       Impact factor: 5.157

10.  Phaser crystallographic software.

Authors:  Airlie J McCoy; Ralf W Grosse-Kunstleve; Paul D Adams; Martyn D Winn; Laurent C Storoni; Randy J Read
Journal:  J Appl Crystallogr       Date:  2007-07-13       Impact factor: 3.304

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  138 in total

1.  Computational Redesign of PD-1 Interface for PD-L1 Ligand Selectivity.

Authors:  Rojan Shrestha; Sarah C Garrett; Steven C Almo; Andras Fiser
Journal:  Structure       Date:  2019-03-28       Impact factor: 5.006

Review 2.  Adjuvant Therapy for Melanoma.

Authors:  Maiko Wada-Ohno; Takamichi Ito; Masutaka Furue
Journal:  Curr Treat Options Oncol       Date:  2019-06-24

3.  Proteomics for cancer drug design.

Authors:  Amanda Haymond; Justin B Davis; Virginia Espina
Journal:  Expert Rev Proteomics       Date:  2019-08-04       Impact factor: 3.940

Review 4.  Toward Small-Molecule Inhibition of Protein-Protein Interactions: General Aspects and Recent Progress in Targeting Costimulatory and Coinhibitory (Immune Checkpoint) Interactions.

Authors:  Damir Bojadzic; Peter Buchwald
Journal:  Curr Top Med Chem       Date:  2018       Impact factor: 3.295

5.  Protodomains: Symmetry-Related Supersecondary Structures in Proteins and Self-Complementarity.

Authors:  Philippe Youkharibache
Journal:  Methods Mol Biol       Date:  2019

6.  Protein Footprinting and X-ray Crystallography Reveal the Interaction of PD-L1 and a Macrocyclic Peptide.

Authors:  Ben Niu; Todd C Appleby; Ruth Wang; Mariya Morar; Johannes Voight; Armando G Villaseñor; Sheila Clancy; Sarah Wise; Jean-Philippe Belzile; Giuseppe Papalia; Melanie Wong; Katherine M Brendza; Latesh Lad; Michael L Gross
Journal:  Biochemistry       Date:  2019-12-31       Impact factor: 3.162

Review 7.  Immune Checkpoint PD-1/PD-L1: Is There Life Beyond Antibodies?

Authors:  Markella Konstantinidou; Tryfon Zarganes-Tzitzikas; Katarzyna Magiera-Mularz; Tad A Holak; Alexander Dömling
Journal:  Angew Chem Int Ed Engl       Date:  2018-02-23       Impact factor: 15.336

8.  Structural basis of anti-PD-L1 monoclonal antibody avelumab for tumor therapy.

Authors:  Kefang Liu; Shuguang Tan; Yan Chai; Danqing Chen; Hao Song; Catherine Wei-Hong Zhang; Yi Shi; Jun Liu; Wenjie Tan; Jianxin Lyu; Shan Gao; Jinghua Yan; Jianxun Qi; George F Gao
Journal:  Cell Res       Date:  2016-08-30       Impact factor: 25.617

9.  Peptide-based PET quantifies target engagement of PD-L1 therapeutics.

Authors:  Dhiraj Kumar; Ala Lisok; Elyes Dahmane; Matthew McCoy; Sagar Shelake; Samit Chatterjee; Viola Allaj; Polina Sysa-Shah; Bryan Wharram; Wojciech G Lesniak; Ellen Tully; Edward Gabrielson; Elizabeth M Jaffee; John T Poirier; Charles M Rudin; Jogarao Vs Gobburu; Martin G Pomper; Sridhar Nimmagadda
Journal:  J Clin Invest       Date:  2019-01-07       Impact factor: 14.808

10.  Selection and characterization of the novel anti-human PD-1 FV78 antibody from a targeted epitope mammalian cell-displayed antibody library.

Authors:  Longlong Luo; Shi Wang; Xiaoling Lang; Tingting Zhou; Jing Geng; Xinying Li; Chunxia Qiao; Jiannan Feng; Beifen Shen; Ming Lv; Yan Li
Journal:  Cell Mol Immunol       Date:  2016-08-08       Impact factor: 11.530

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