Literature DB >> 26601740

Identification of mutations in Korean patients with amyotrophic lateral sclerosis using multigene panel testing.

Hee-Jung Kim1, Ki-Wook Oh2, Min-Jung Kwon3, Seong-Il Oh4, Jin-Seok Park2, Young-Eun Kim5, Byung-Ok Choi6, Seungbok Lee7, Chang-Seok Ki8, Seung Hyun Kim9.   

Abstract

Amyotrophic lateral sclerosis (ALS) is a rapidly progressive neurodegenerative disease involving motor neurons. Because a growing number of genes have been identified as the genetic etiology of ALS, simultaneous screening of mutations in multiple genes is likely to be more efficient than gene-by-gene testing. In this study, we performed a multigene panel testing by using targeted capture of 18 ALS-related genes followed by next-generation sequencing. Using this technique, we tried to identify mutations in 4 index patients with familial ALS and 148 sporadic ALS in Korean population and identified 4 known mutations in SOD1, ALS2, MAPT, and SQSTM1 genes, respectively, and 28 variants of uncertain significance in 9 genes. Among the 28 variants of uncertain significance, 6 missense variants were found in highly conserved residues and were consistently predicted to be deleterious by in silico analyses. These results suggest that multigene panel testing is an effective approach for mutation screening in ALS-related genes. Moreover, the relatively low frequency of mutations in known ALS genes implies marked genetic heterogeneity at least in Korean patients with ALS.
Copyright © 2016 Elsevier Inc. All rights reserved.

Entities:  

Keywords:  ALS; Amyotrophic lateral sclerosis; Multigene panel; Mutation; NGS; Next-generation sequencing

Mesh:

Substances:

Year:  2015        PMID: 26601740     DOI: 10.1016/j.neurobiolaging.2015.09.012

Source DB:  PubMed          Journal:  Neurobiol Aging        ISSN: 0197-4580            Impact factor:   4.673


  7 in total

1.  The NGS technology for the identification of genes associated with the ALS. A systematic review.

Authors:  Valentina Pecoraro; Jessica Mandrioli; Chiara Carone; Adriano Chiò; Bryan J Traynor; Tommaso Trenti
Journal:  Eur J Clin Invest       Date:  2020-05-19       Impact factor: 5.722

2.  Rapid Progression of Sporadic ALS in a Patient Carrying SOD1 p.Gly13Arg Mutation.

Authors:  Myung-Jin Kim; Jae-Han Bae; Jeong-Min Kim; Hye Ryoun Kim; Byung-Nam Yoon; Jung-Joon Sung; Suk-Won Ahn
Journal:  Exp Neurobiol       Date:  2016-12-15       Impact factor: 3.261

3.  Epidemiology of ALS in Korea using nationwide big data.

Authors:  Kyo Yeon Jun; Jinseok Park; Inah Kim; Seung Hyun Kim; Ki-Wook Oh; Eun Mi Kim; Jong Seok Bae
Journal:  J Neurol Neurosurg Psychiatry       Date:  2018-11-08       Impact factor: 10.154

Review 4.  Epidemiology of amyotrophic lateral sclerosis: an update of recent literature.

Authors:  Elisa Longinetti; Fang Fang
Journal:  Curr Opin Neurol       Date:  2019-10       Impact factor: 5.710

5.  Directly converted patient-specific induced neurons mirror the neuropathology of FUS with disrupted nuclear localization in amyotrophic lateral sclerosis.

Authors:  Su Min Lim; Won Jun Choi; Ki-Wook Oh; Yuanchao Xue; Ji Young Choi; Sung Hoon Kim; Minyeop Nahm; Young-Eun Kim; Jinhyuk Lee; Min-Young Noh; Seungbok Lee; Sejin Hwang; Chang-Seok Ki; Xiang-Dong Fu; Seung Hyun Kim
Journal:  Mol Neurodegener       Date:  2016-01-22       Impact factor: 14.195

6.  Burden of Rare Variants in ALS and Axonal Hereditary Neuropathy Genes Influence Survival in ALS: Insights from a Next Generation Sequencing Study of an Italian ALS Cohort.

Authors:  Stefania Scarlino; Teuta Domi; Laura Pozzi; Alessandro Romano; Giovanni Battista Pipitone; Yuri Matteo Falzone; Lorena Mosca; Silvana Penco; Christian Lunetta; Valeria Sansone; Lucio Tremolizzo; Raffaella Fazio; Federica Agosta; Massimo Filippi; Paola Carrera; Nilo Riva; Angelo Quattrini
Journal:  Int J Mol Sci       Date:  2020-05-08       Impact factor: 5.923

7.  Chinese families with autosomal recessive hereditary spastic paraplegia caused by mutations in SPG11.

Authors:  Xueping Chen; Jiao Liu; Qian-Qian Wei; Ru Wei Ou; Bei Cao; Xiaoqin Yuan; Yanbing Hou; Lingyu Zhang; Huifang Shang
Journal:  BMC Neurol       Date:  2020-01-03       Impact factor: 2.474

  7 in total

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