Literature DB >> 26598273

A Simple Mechanism Underlying the Effect of Protecting Osmolytes on Protein Folding.

G Saladino1, M Marenchino2, S Pieraccini1,3, R Campos-Olivas2, M Sironi1,3,4, F L Gervasio2.   

Abstract

Osmolytes are small organic compounds that confer to the cell an enhanced adaptability to external conditions. Many osmolytes not only protect the cell from osmotic stress but also stabilize the native structure of proteins. While simplified models able to predict changes to protein stability are available, a general physicochemical explanation of the underlying microscopic mechanism is still missing. Here, we address this issue by performing very long all-atom MD simulations, free energy calculations, and experiments on a well-characterized mini-protein, the villin headpiece. Comparisons between the folding free energy landscapes in pure water and osmolyte solutions, together with experimental validation by means of circular dichroism, unfolding experiments, and NMR, led us to formulate a simple hypothesis for the protecting mechanism. Taken together, our results support a novel mechanistic explanation according to which the main driving force behind native state protection is a change in the solvent rotational diffusion.

Entities:  

Year:  2011        PMID: 26598273     DOI: 10.1021/ct200471w

Source DB:  PubMed          Journal:  J Chem Theory Comput        ISSN: 1549-9618            Impact factor:   6.006


  2 in total

1.  Interactions in Ternary Aqueous Solutions of NMA and Osmolytes-PARAFAC Decomposition of FTIR Spectra Series.

Authors:  Emilia Kaczkowska; Aneta Panuszko; Piotr Bruździak
Journal:  Int J Mol Sci       Date:  2021-10-28       Impact factor: 5.923

2.  Changes in the folding landscape of the WW domain provide a molecular mechanism for an inherited genetic syndrome.

Authors:  Encarna Pucheta-Martinez; Nicola D'Amelio; Moreno Lelli; Jorge L Martinez-Torrecuadrada; Marius Sudol; Giorgio Saladino; Francesco Luigi Gervasio
Journal:  Sci Rep       Date:  2016-07-26       Impact factor: 4.379

  2 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.