Literature DB >> 26596752

On Atomistic and Coarse-Grained Models for C60 Fullerene.

Luca Monticelli1,2,3.   

Abstract

Many atomistic and coarse-grained simulations of fullerene and fullerene derivatives are reported in the literature, but validation of both atomistic and coarse-grained models has been very limited. Here, we report a thorough validation of several all-atom fullerene models and refinement of the MARTINI coarse-grained (CG) fullerene model. The all-atom model by Girifalco had been parametrized using only solid-state properties (lattice constant, heat of sublimation), but it performs well also in the liquid state in terms of partitioning between different solvents. The new MARTINI CG model is optimized by matching experimental free energies of transfer between different solvents (for fullerene-solvent interactions) and atomistic fullerene-fullerene potentials of mean force (PMF) in water and in octane (for fullerene-fullerene interactions). The model gives reasonable results for solid-state properties and also reproduces atomistic results on the PMF in a lipid membrane. We conclude that the new MARTINI model is suitable for large-scale simulations of the interaction of fullerene with water, organic solvents, and lipid membranes.

Entities:  

Year:  2012        PMID: 26596752     DOI: 10.1021/ct3000102

Source DB:  PubMed          Journal:  J Chem Theory Comput        ISSN: 1549-9618            Impact factor:   6.006


  11 in total

1.  C₆₀ fullerene promotes lung monolayer collapse.

Authors:  Jonathan Barnoud; Laura Urbini; Luca Monticelli
Journal:  J R Soc Interface       Date:  2015-03-06       Impact factor: 4.118

2.  Fullerenes' Interactions with Plasma Membranes: Insight from the MD Simulations.

Authors:  Nililla Nisoh; Viwan Jarerattanachat; Mikko Karttunen; Jirasak Wong-Ekkabut
Journal:  Biomolecules       Date:  2022-04-26

3.  Co-exposure with fullerene may strengthen health effects of organic industrial chemicals.

Authors:  Maili Lehto; Topi Karilainen; Tomasz Róg; Oana Cramariuc; Esa Vanhala; Jarkko Tornaeus; Helena Taberman; Janne Jänis; Harri Alenius; Ilpo Vattulainen; Olli Laine
Journal:  PLoS One       Date:  2014-12-04       Impact factor: 3.240

4.  Hydrophobic compounds reshape membrane domains.

Authors:  Jonathan Barnoud; Giulia Rossi; Siewert J Marrink; Luca Monticelli
Journal:  PLoS Comput Biol       Date:  2014-10-09       Impact factor: 4.475

5.  Bulk Heterojunction Morphologies with Atomistic Resolution from Coarse-Grain Solvent Evaporation Simulations.

Authors:  Riccardo Alessandri; Jaakko J Uusitalo; Alex H de Vries; Remco W A Havenith; Siewert J Marrink
Journal:  J Am Chem Soc       Date:  2017-03-07       Impact factor: 15.419

6.  Coarse-Grained Simulations Using a Multipolar Force Field Model.

Authors:  Shuo-Feng Chiu; Sheng D Chao
Journal:  Materials (Basel)       Date:  2018-07-31       Impact factor: 3.623

7.  Theoretical Study of the Charge Transfer Exciton Binding Energy in Semiconductor Materials for Polymer:Fullerene-Based Bulk Heterojunction Solar Cells.

Authors:  Maria A Izquierdo; Ria Broer; Remco W A Havenith
Journal:  J Phys Chem A       Date:  2019-02-01       Impact factor: 2.781

8.  Fullerene translocation through peroxidized lipid membranes.

Authors:  Gulsah Gul; Nazar Ileri-Ercan
Journal:  RSC Adv       Date:  2021-02-15       Impact factor: 3.361

9.  Bodipy-C60 triple hydrogen bonding assemblies as heavy atom-free triplet photosensitizers: preparation and study of the singlet/triplet energy transfer.

Authors:  Song Guo; Liang Xu; Kejing Xu; Jianzhang Zhao; Betül Küçüköz; Ahmet Karatay; Halime Gul Yaglioglu; Mustafa Hayvali; Ayhan Elmali
Journal:  Chem Sci       Date:  2015-04-09       Impact factor: 9.825

10.  Dependence of fullerene aggregation on lipid saturation due to a balance between entropy and enthalpy.

Authors:  Pornkamon Nalakarn; Phansiri Boonnoy; Nililla Nisoh; Mikko Karttunen; Jirasak Wong-Ekkabut
Journal:  Sci Rep       Date:  2019-01-31       Impact factor: 4.379

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