Literature DB >> 26594574

Crystal structure of (5-chloro-2-hy-droxy-phen-yl)(3-methyl-isoxazolo[5,4-b]pyridin-5-yl)methanone.

Rajamani Raja1, Nataraj Poomathi2, Paramasivam T Perumal2, A SubbiahPandi1.   

Abstract

In the title compound, C14H9ClN2O3, the fused pyridine and isoxazole rings are approximately planar, making a dihedral angle of 1.14 (16)°. The mol-ecule is twisted with the benzene ring and the mean plane through the fused pyridine-isoxazole ring system being inclined to one another by 47.03 (13)°. There is an intra-molecular O-H⋯O hydrogen bond forming an S(6) ring motif. In the crystal, mol-ecules are linked by C-H⋯N hydrogen bonds, forming chains propagating along [001]. The chains are linked by slipped parallel π-π inter-actions, involving inversion-related benzene rings, forming slabs lying parallel to the bc plane {inter-centroid distance = 3.770 (2) Å].

Entities:  

Keywords:  C—H⋯N hydrogen bonds; O—H⋯O hydrogen bonds; crystal structure; isoxazole; polyfunctional pyridines

Year:  2015        PMID: 26594574      PMCID: PMC4645069          DOI: 10.1107/S2056989015019635

Source DB:  PubMed          Journal:  Acta Crystallogr E Crystallogr Commun


Related literature

For various applications of polyfunctional pyridines, see: Knyazhanskii et al. (1996 ▸); Kürfurst et al. (1989 ▸); Enyedy et al. (2003 ▸); Arora & Knaus (1999 ▸); Kim et al. 2004 ▸); Pillai et al.(2003 ▸).

Experimental

Crystal data

C14H9ClN2O3 M = 288.68 Monoclinic, a = 11.0317 (10) Å b = 11.8701 (10) Å c = 11.1220 (9) Å β = 118.675 (2)° V = 1277.78 (19) Å3 Z = 4 Mo Kα radiation μ = 0.31 mm−1 T = 293 K 0.35 × 0.30 × 0.25 mm

Data collection

Bruker SMART APEXII CCD diffractometer Absorption correction: multi-scan (SADABS; Bruker, 2008 ▸) T min = 0.900, T max = 0.927 17705 measured reflections 2250 independent reflections 1763 reflections with I > 2σ(I) R int = 0.022

Refinement

R[F 2 > 2σ(F 2)] = 0.048 wR(F 2) = 0.110 S = 1.13 2250 reflections 182 parameters H-atom parameters constrained Δρmax = 0.28 e Å−3 Δρmin = −0.42 e Å−3

Data collection: APEX2 (Bruker, 2008 ▸); cell refinement: SAINT (Bruker, 2008 ▸); data reduction: SAINT; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▸); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▸); molecular graphics: ORTEP-3 for Windows (Farrugia, 2012 ▸); software used to prepare material for publication: SHELXL97 and PLATON (Spek, 2009 ▸). Crystal structure: contains datablock(s) global, I. DOI: 10.1107/S2056989015019635/su5220sup1.cif Structure factors: contains datablock(s) I. DOI: 10.1107/S2056989015019635/su5220Isup2.hkl Click here for additional data file. Supporting information file. DOI: 10.1107/S2056989015019635/su5220Isup3.cml Click here for additional data file. . DOI: 10.1107/S2056989015019635/su5220fig1.tif The mol­ecular structure of the title compound, with atom labelling. Displacement ellipsoids are drawn at the 30% probability level. Click here for additional data file. b- . DOI: 10.1107/S2056989015019635/su5220fig2.tif A view along the b-axis of the crystal packing of the title compound. The hydrogen bonds are shown as dashed lines (see Table 1 for details). CCDC reference: 1431889 Additional supporting information: crystallographic information; 3D view; checkCIF report
C14H9ClN2O3F(000) = 592
Mr = 288.68Dx = 1.501 Mg m3
Monoclinic, P21/cMo Kα radiation, λ = 0.71073 Å
Hall symbol: -P 2ybcCell parameters from 1763 reflections
a = 11.0317 (10) Åθ = 2.1–25.0°
b = 11.8701 (10) ŵ = 0.31 mm1
c = 11.1220 (9) ÅT = 293 K
β = 118.675 (2)°Block, colourless
V = 1277.78 (19) Å30.35 × 0.30 × 0.25 mm
Z = 4
Bruker SMART APEXII CCD diffractometer2250 independent reflections
Radiation source: fine-focus sealed tube1763 reflections with I > 2σ(I)
Graphite monochromatorRint = 0.022
ω and φ scansθmax = 25.0°, θmin = 2.1°
Absorption correction: multi-scan (SADABS; Bruker, 2008)h = −13→13
Tmin = 0.900, Tmax = 0.927k = −14→14
17705 measured reflectionsl = −13→13
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.048Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.110H-atom parameters constrained
S = 1.13w = 1/[σ2(Fo2) + (0.0188P)2 + 1.3834P] where P = (Fo2 + 2Fc2)/3
2250 reflections(Δ/σ)max < 0.001
182 parametersΔρmax = 0.28 e Å3
0 restraintsΔρmin = −0.42 e Å3
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
C10.1833 (3)−0.0368 (3)0.9816 (3)0.0592 (8)
C20.1378 (3)0.0264 (4)0.8629 (3)0.0738 (10)
H20.1386−0.00510.78680.089*
C30.0917 (3)0.1343 (3)0.8560 (3)0.0711 (10)
H30.06140.17550.77550.085*
C40.0900 (3)0.1827 (3)0.9696 (3)0.0541 (7)
C50.1386 (2)0.1234 (2)1.0890 (2)0.0432 (6)
H50.13840.15641.16480.052*
C60.1887 (2)0.0133 (2)1.0988 (3)0.0436 (6)
C70.2418 (2)−0.0531 (2)1.2263 (3)0.0455 (6)
C80.2796 (2)−0.0001 (2)1.3606 (3)0.0424 (6)
C90.2544 (3)−0.0637 (2)1.4535 (3)0.0578 (7)
H90.2125−0.13361.42430.069*
C100.3469 (3)0.0675 (3)1.6116 (3)0.0528 (7)
C110.3811 (2)0.1373 (2)1.5332 (2)0.0414 (6)
C120.3455 (2)0.1025 (2)1.4011 (2)0.0388 (6)
H120.36520.14601.34300.047*
C130.4447 (3)0.2330 (2)1.6185 (2)0.0471 (6)
C140.5010 (3)0.3350 (3)1.5876 (3)0.0607 (8)
H14A0.53860.38401.66590.091*
H14B0.42860.37331.51070.091*
H14C0.57260.31401.56620.091*
N10.2861 (3)−0.0312 (2)1.5798 (3)0.0656 (7)
N20.4480 (3)0.2213 (2)1.7365 (2)0.0640 (7)
O10.2205 (3)−0.1444 (2)0.9793 (3)0.0850 (8)
H10.2460−0.17321.05470.127*
O20.2567 (2)−0.15626 (16)1.2243 (2)0.0661 (6)
O30.3854 (2)0.1149 (2)1.73518 (19)0.0709 (6)
Cl10.02472 (9)0.31717 (7)0.95930 (9)0.0802 (3)
U11U22U33U12U13U23
C10.0495 (17)0.074 (2)0.0569 (18)−0.0167 (15)0.0281 (14)−0.0221 (16)
C20.071 (2)0.106 (3)0.0519 (19)−0.033 (2)0.0359 (17)−0.0268 (19)
C30.061 (2)0.102 (3)0.0392 (16)−0.0353 (19)0.0150 (14)0.0022 (17)
C40.0383 (14)0.0663 (18)0.0424 (15)−0.0144 (13)0.0070 (12)0.0058 (13)
C50.0346 (13)0.0518 (15)0.0355 (13)−0.0093 (11)0.0106 (11)−0.0045 (11)
C60.0340 (13)0.0525 (15)0.0442 (14)−0.0113 (11)0.0188 (11)−0.0120 (12)
C70.0335 (13)0.0425 (15)0.0556 (16)0.0001 (11)0.0175 (12)−0.0020 (12)
C80.0371 (13)0.0408 (14)0.0444 (14)0.0072 (11)0.0156 (11)0.0055 (11)
C90.0558 (17)0.0484 (16)0.0618 (18)0.0011 (13)0.0222 (15)0.0138 (14)
C100.0456 (16)0.073 (2)0.0380 (14)0.0126 (14)0.0183 (12)0.0119 (14)
C110.0364 (13)0.0506 (15)0.0355 (13)0.0095 (11)0.0159 (11)0.0066 (11)
C120.0336 (12)0.0447 (14)0.0365 (12)0.0059 (11)0.0154 (10)0.0061 (11)
C130.0381 (14)0.0623 (17)0.0339 (13)0.0125 (12)0.0116 (11)−0.0022 (12)
C140.0591 (18)0.0647 (19)0.0491 (16)−0.0026 (15)0.0185 (14)−0.0124 (14)
N10.0707 (17)0.0709 (18)0.0530 (15)0.0019 (14)0.0277 (13)0.0197 (13)
N20.0630 (16)0.088 (2)0.0388 (13)0.0124 (14)0.0224 (12)−0.0035 (13)
O10.0909 (17)0.0841 (17)0.0906 (17)−0.0042 (14)0.0521 (15)−0.0375 (14)
O20.0642 (13)0.0443 (12)0.0777 (15)0.0077 (10)0.0243 (11)−0.0065 (10)
O30.0781 (15)0.0984 (18)0.0404 (11)0.0073 (13)0.0317 (11)0.0092 (11)
Cl10.0684 (5)0.0677 (5)0.0732 (6)−0.0036 (4)0.0090 (4)0.0258 (4)
C1—O11.345 (4)C9—N11.331 (4)
C1—C21.386 (5)C9—H90.9300
C1—C61.408 (4)C10—N11.312 (4)
C2—C31.366 (5)C10—O31.351 (3)
C2—H20.9300C10—C111.380 (4)
C3—C41.396 (4)C11—C121.390 (3)
C3—H30.9300C11—C131.430 (4)
C4—C51.365 (4)C12—H120.9300
C4—Cl11.733 (3)C13—N21.302 (3)
C5—C61.403 (4)C13—C141.474 (4)
C5—H50.9300C14—H14A0.9600
C6—C71.476 (4)C14—H14B0.9600
C7—O21.237 (3)C14—H14C0.9600
C7—C81.485 (4)N2—O31.436 (3)
C8—C121.378 (3)O1—H10.8200
C8—C91.411 (4)
O1—C1—C2118.0 (3)N1—C9—H9117.5
O1—C1—C6122.8 (3)C8—C9—H9117.5
C2—C1—C6119.2 (3)N1—C10—O3121.1 (3)
C3—C2—C1121.1 (3)N1—C10—C11128.7 (3)
C3—C2—H2119.5O3—C10—C11110.2 (3)
C1—C2—H2119.5C10—C11—C12117.7 (3)
C2—C3—C4120.1 (3)C10—C11—C13104.7 (2)
C2—C3—H3120.0C12—C11—C13137.5 (2)
C4—C3—H3120.0C8—C12—C11116.4 (2)
C5—C4—C3120.0 (3)C8—C12—H12121.8
C5—C4—Cl1119.7 (2)C11—C12—H12121.8
C3—C4—Cl1120.4 (2)N2—C13—C11110.5 (3)
C4—C5—C6120.8 (3)N2—C13—C14120.7 (3)
C4—C5—H5119.6C11—C13—C14128.7 (2)
C6—C5—H5119.6C13—C14—H14A109.5
C5—C6—C1118.8 (3)C13—C14—H14B109.5
C5—C6—C7122.2 (2)H14A—C14—H14B109.5
C1—C6—C7119.0 (3)C13—C14—H14C109.5
O2—C7—C6120.4 (2)H14A—C14—H14C109.5
O2—C7—C8117.6 (2)H14B—C14—H14C109.5
C6—C7—C8122.0 (2)C10—N1—C9112.6 (2)
C12—C8—C9119.5 (2)C13—N2—O3107.7 (2)
C12—C8—C7123.5 (2)C1—O1—H1109.5
C9—C8—C7116.8 (2)C10—O3—N2106.9 (2)
N1—C9—C8125.0 (3)
O1—C1—C2—C3176.6 (3)C7—C8—C9—N1177.5 (3)
C6—C1—C2—C3−3.4 (5)N1—C10—C11—C121.4 (4)
C1—C2—C3—C40.1 (5)O3—C10—C11—C12−178.4 (2)
C2—C3—C4—C52.1 (4)N1—C10—C11—C13179.9 (3)
C2—C3—C4—Cl1−177.2 (2)O3—C10—C11—C130.1 (3)
C3—C4—C5—C6−0.9 (4)C9—C8—C12—C11−1.1 (3)
Cl1—C4—C5—C6178.34 (18)C7—C8—C12—C11−176.2 (2)
C4—C5—C6—C1−2.4 (4)C10—C11—C12—C8−0.4 (3)
C4—C5—C6—C7−180.0 (2)C13—C11—C12—C8−178.3 (3)
O1—C1—C6—C5−175.5 (2)C10—C11—C13—N20.0 (3)
C2—C1—C6—C54.4 (4)C12—C11—C13—N2178.0 (3)
O1—C1—C6—C72.2 (4)C10—C11—C13—C14−179.6 (3)
C2—C1—C6—C7−177.9 (3)C12—C11—C13—C14−1.6 (5)
C5—C6—C7—O2164.1 (2)O3—C10—N1—C9179.3 (3)
C1—C6—C7—O2−13.5 (4)C11—C10—N1—C9−0.6 (4)
C5—C6—C7—C8−16.1 (4)C8—C9—N1—C10−1.2 (4)
C1—C6—C7—C8166.3 (2)C11—C13—N2—O30.0 (3)
O2—C7—C8—C12140.6 (3)C14—C13—N2—O3179.6 (2)
C6—C7—C8—C12−39.3 (4)N1—C10—O3—N2−179.9 (2)
O2—C7—C8—C9−34.7 (3)C11—C10—O3—N2−0.1 (3)
C6—C7—C8—C9145.5 (2)C13—N2—O3—C100.0 (3)
C12—C8—C9—N12.1 (4)
D—H···AD—HH···AD···AD—H···A
O1—H1···O20.821.842.561 (4)145
C12—H12···N2i0.932.403.315 (4)168
Table 1

Hydrogen-bond geometry (, )

DHA DHHA D A DHA
O1H1O20.821.842.561(4)145
C12H12N2i 0.932.403.315(4)168

Symmetry code: (i) .

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