| Literature DB >> 26594560 |
Abstract
In the anhydrous salt formed from the reaction of morpholine with cinnamic acid, C4H10NO(+)·C9H7O2 (-), the acid side chain in the trans-cinnamate anion is significantly rotated out of the benzene plane [C-C-C- C torsion angle = 158.54 (17)°]. In the crystal, one of the the aminium H atoms is involved in an asymmetric three-centre cation-anion N-H⋯(O,O') R 1 (2)(4) hydrogen-bonding inter-action with the two carboxyl-ate O-atom acceptors of the anion. The second aminium-H atom forms an inter-species N-H⋯Ocarboxyl-ate hydrogen bond. The result of the hydrogen bonding is the formation of a chain structure extending along [100]. Chains are linked by C-H⋯O inter-actions, forming a supra-molecular layer parallel to (01-1).Entities:
Keywords: cinnamate; crystal structure; hydrogen bonding; morpholinium; salt
Year: 2015 PMID: 26594560 PMCID: PMC4645001 DOI: 10.1107/S2056989015019179
Source DB: PubMed Journal: Acta Crystallogr E Crystallogr Commun
| C4H10NO+·C9H7O2− | |
| Triclinic, | |
| Hall symbol: -P 1 | Mo |
| Cell parameters from 1133 reflections | |
| θ = 3.6–28.4° | |
| µ = 0.09 mm−1 | |
| α = 103.270 (8)° | |
| β = 93.468 (9)° | Plate, colourless |
| γ = 105.493 (10)° | 0.52 × 0.24 × 0.05 mm |
| Oxford Diffraction Gemini-S CCD-detector diffractometer | 2393 independent reflections |
| Radiation source: Enhance (Mo) X-ray source | 1860 reflections with |
| Graphite monochromator | |
| Detector resolution: 16.077 pixels mm-1 | θmax = 26.0°, θmin = 3.2° |
| ω scans | |
| Absorption correction: multi-scan ( | |
| 4253 measured reflections |
| Refinement on | Primary atom site location: structure-invariant direct methods |
| Least-squares matrix: full | Secondary atom site location: difference Fourier map |
| Hydrogen site location: inferred from neighbouring sites | |
| H atoms treated by a mixture of independent and constrained refinement | |
| 2393 reflections | (Δ/σ)max < 0.001 |
| 160 parameters | Δρmax = 0.15 e Å−3 |
| 2 restraints | Δρmin = −0.15 e Å−3 |
| Geometry. Bond distances, angles etc. have been calculated using the rounded fractional coordinates. All su's are estimated from the variances of the (full) variance-covariance matrix. The cell esds are taken into account in the estimation of distances, angles and torsion angles |
| Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > 2sigma(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger. |
| O13A | 0.72059 (18) | 0.32720 (13) | 0.51574 (9) | 0.0370 (4) | |
| O14A | 0.50422 (18) | 0.43517 (12) | 0.63746 (10) | 0.0323 (4) | |
| C1A | 0.0669 (3) | 0.04440 (16) | 0.29775 (13) | 0.0256 (5) | |
| C2A | −0.1554 (3) | 0.00183 (17) | 0.34093 (15) | 0.0299 (5) | |
| C3A | −0.3583 (3) | −0.09424 (18) | 0.26731 (16) | 0.0365 (6) | |
| C4A | −0.3450 (3) | −0.14842 (18) | 0.14947 (16) | 0.0388 (6) | |
| C5A | −0.1258 (3) | −0.10770 (18) | 0.10580 (15) | 0.0384 (6) | |
| C6A | 0.0789 (3) | −0.01381 (17) | 0.17959 (14) | 0.0321 (5) | |
| C11A | 0.2852 (3) | 0.14762 (17) | 0.37395 (14) | 0.0262 (5) | |
| C12A | 0.2907 (3) | 0.24300 (17) | 0.47379 (14) | 0.0276 (5) | |
| C13A | 0.5213 (3) | 0.34254 (17) | 0.54714 (13) | 0.0258 (5) | |
| O4B | 1.2058 (2) | 0.63511 (13) | 0.93100 (10) | 0.0398 (4) | |
| N1B | 1.0764 (2) | 0.48489 (14) | 0.68969 (11) | 0.0253 (4) | |
| C2B | 1.0246 (3) | 0.40701 (18) | 0.78354 (14) | 0.0310 (5) | |
| C3B | 1.2089 (3) | 0.48633 (18) | 0.89057 (14) | 0.0354 (6) | |
| C5B | 1.2676 (3) | 0.71057 (18) | 0.84191 (15) | 0.0355 (6) | |
| C6B | 1.0875 (3) | 0.64183 (17) | 0.73241 (14) | 0.0298 (5) | |
| H2A | −0.16720 | 0.03930 | 0.42160 | 0.0360* | |
| H3A | −0.50810 | −0.12330 | 0.29790 | 0.0440* | |
| H4A | −0.48570 | −0.21320 | 0.09880 | 0.0470* | |
| H5A | −0.11570 | −0.14440 | 0.02480 | 0.0460* | |
| H6A | 0.22990 | 0.01130 | 0.14920 | 0.0390* | |
| H11A | 0.43820 | 0.14510 | 0.34830 | 0.0310* | |
| H12A | 0.14000 | 0.24890 | 0.50070 | 0.0330* | |
| H11B | 1.227 (3) | 0.4752 (17) | 0.6663 (13) | 0.0300* | |
| H12B | 0.951 (3) | 0.4376 (17) | 0.6261 (12) | 0.0300* | |
| H21B | 1.03230 | 0.30470 | 0.75550 | 0.0370* | |
| H22B | 0.85830 | 0.40330 | 0.80370 | 0.0370* | |
| H31B | 1.17210 | 0.43540 | 0.95390 | 0.0420* | |
| H32B | 1.37370 | 0.48430 | 0.87120 | 0.0420* | |
| H51B | 1.43250 | 0.70830 | 0.82290 | 0.0430* | |
| H52B | 1.27130 | 0.81480 | 0.87160 | 0.0430* | |
| H61B | 0.92430 | 0.65020 | 0.74950 | 0.0360* | |
| H62B | 1.13770 | 0.69400 | 0.67100 | 0.0360* |
| O13A | 0.0181 (6) | 0.0508 (8) | 0.0320 (7) | 0.0093 (5) | −0.0013 (5) | −0.0075 (6) |
| O14A | 0.0217 (6) | 0.0368 (7) | 0.0304 (6) | 0.0073 (5) | −0.0001 (5) | −0.0048 (5) |
| C1A | 0.0255 (8) | 0.0211 (8) | 0.0289 (9) | 0.0061 (7) | −0.0022 (7) | 0.0063 (7) |
| C2A | 0.0265 (8) | 0.0251 (9) | 0.0334 (9) | 0.0043 (7) | −0.0008 (7) | 0.0035 (7) |
| C3A | 0.0259 (9) | 0.0273 (9) | 0.0516 (12) | 0.0036 (7) | −0.0029 (8) | 0.0075 (8) |
| C4A | 0.0375 (10) | 0.0242 (9) | 0.0453 (11) | 0.0036 (8) | −0.0174 (8) | 0.0026 (8) |
| C5A | 0.0522 (11) | 0.0299 (10) | 0.0279 (9) | 0.0099 (9) | −0.0062 (8) | 0.0026 (8) |
| C6A | 0.0349 (9) | 0.0279 (9) | 0.0312 (9) | 0.0069 (8) | 0.0013 (7) | 0.0065 (7) |
| C11A | 0.0213 (8) | 0.0277 (9) | 0.0294 (9) | 0.0065 (7) | 0.0021 (6) | 0.0080 (7) |
| C12A | 0.0191 (8) | 0.0311 (9) | 0.0303 (9) | 0.0072 (7) | 0.0019 (6) | 0.0039 (7) |
| C13A | 0.0213 (8) | 0.0295 (9) | 0.0261 (9) | 0.0076 (7) | 0.0007 (6) | 0.0064 (7) |
| O4B | 0.0518 (8) | 0.0356 (7) | 0.0241 (6) | 0.0068 (6) | −0.0002 (5) | 0.0001 (5) |
| N1B | 0.0185 (6) | 0.0305 (8) | 0.0222 (7) | 0.0066 (6) | −0.0013 (5) | −0.0007 (6) |
| C2B | 0.0287 (8) | 0.0269 (9) | 0.0361 (10) | 0.0057 (7) | 0.0024 (7) | 0.0085 (8) |
| C3B | 0.0402 (10) | 0.0363 (10) | 0.0286 (9) | 0.0101 (8) | −0.0011 (7) | 0.0088 (8) |
| C5B | 0.0380 (10) | 0.0257 (9) | 0.0351 (10) | 0.0009 (8) | 0.0011 (8) | 0.0032 (8) |
| C6B | 0.0296 (9) | 0.0280 (9) | 0.0321 (9) | 0.0082 (7) | 0.0045 (7) | 0.0085 (7) |
| O13A—C13A | 1.258 (2) | C2A—H2A | 0.9500 |
| O14A—C13A | 1.2553 (19) | C3A—H3A | 0.9500 |
| O4B—C3B | 1.425 (2) | C4A—H4A | 0.9500 |
| O4B—C5B | 1.424 (2) | C5A—H5A | 0.9500 |
| N1B—C2B | 1.480 (2) | C6A—H6A | 0.9500 |
| N1B—C6B | 1.480 (2) | C11A—H11A | 0.9500 |
| N1B—H11B | 0.944 (18) | C12A—H12A | 0.9500 |
| N1B—H12B | 0.943 (15) | C2B—C3B | 1.503 (2) |
| C1A—C6A | 1.390 (2) | C5B—C6B | 1.501 (2) |
| C1A—C2A | 1.396 (2) | C2B—H21B | 0.9900 |
| C1A—C11A | 1.471 (2) | C2B—H22B | 0.9900 |
| C2A—C3A | 1.381 (2) | C3B—H31B | 0.9900 |
| C3A—C4A | 1.382 (3) | C3B—H32B | 0.9900 |
| C4A—C5A | 1.382 (3) | C5B—H51B | 0.9900 |
| C5A—C6A | 1.382 (2) | C5B—H52B | 0.9900 |
| C11A—C12A | 1.314 (2) | C6B—H61B | 0.9900 |
| C12A—C13A | 1.493 (2) | C6B—H62B | 0.9900 |
| C3B—O4B—C5B | 109.75 (12) | C1A—C6A—H6A | 120.00 |
| C2B—N1B—C6B | 111.05 (12) | C12A—C11A—H11A | 117.00 |
| C6B—N1B—H11B | 110.9 (10) | C1A—C11A—H11A | 117.00 |
| C2B—N1B—H12B | 107.7 (10) | C11A—C12A—H12A | 118.00 |
| H11B—N1B—H12B | 109.8 (14) | C13A—C12A—H12A | 118.00 |
| C2B—N1B—H11B | 107.0 (10) | N1B—C2B—C3B | 109.50 (14) |
| C6B—N1B—H12B | 110.3 (10) | O4B—C3B—C2B | 110.91 (14) |
| C2A—C1A—C11A | 121.67 (14) | O4B—C5B—C6B | 111.36 (14) |
| C6A—C1A—C11A | 120.00 (15) | N1B—C6B—C5B | 109.46 (14) |
| C2A—C1A—C6A | 118.33 (15) | N1B—C2B—H21B | 110.00 |
| C1A—C2A—C3A | 120.55 (16) | N1B—C2B—H22B | 110.00 |
| C2A—C3A—C4A | 120.46 (17) | C3B—C2B—H21B | 110.00 |
| C3A—C4A—C5A | 119.55 (16) | C3B—C2B—H22B | 110.00 |
| C4A—C5A—C6A | 120.21 (16) | H21B—C2B—H22B | 108.00 |
| C1A—C6A—C5A | 120.88 (16) | O4B—C3B—H31B | 109.00 |
| C1A—C11A—C12A | 126.79 (16) | O4B—C3B—H32B | 109.00 |
| C11A—C12A—C13A | 123.45 (16) | C2B—C3B—H31B | 109.00 |
| O13A—C13A—O14A | 123.98 (15) | C2B—C3B—H32B | 109.00 |
| O13A—C13A—C12A | 118.14 (14) | H31B—C3B—H32B | 108.00 |
| O14A—C13A—C12A | 117.87 (15) | O4B—C5B—H51B | 109.00 |
| C1A—C2A—H2A | 120.00 | O4B—C5B—H52B | 109.00 |
| C3A—C2A—H2A | 120.00 | C6B—C5B—H51B | 109.00 |
| C4A—C3A—H3A | 120.00 | C6B—C5B—H52B | 109.00 |
| C2A—C3A—H3A | 120.00 | H51B—C5B—H52B | 108.00 |
| C3A—C4A—H4A | 120.00 | N1B—C6B—H61B | 110.00 |
| C5A—C4A—H4A | 120.00 | N1B—C6B—H62B | 110.00 |
| C6A—C5A—H5A | 120.00 | C5B—C6B—H61B | 110.00 |
| C4A—C5A—H5A | 120.00 | C5B—C6B—H62B | 110.00 |
| C5A—C6A—H6A | 120.00 | H61B—C6B—H62B | 108.00 |
| C3B—O4B—C5B—C6B | 61.19 (17) | C1A—C2A—C3A—C4A | −0.7 (3) |
| C5B—O4B—C3B—C2B | −61.29 (17) | C2A—C3A—C4A—C5A | 1.0 (3) |
| C2B—N1B—C6B—C5B | 54.09 (17) | C3A—C4A—C5A—C6A | 0.2 (3) |
| C6B—N1B—C2B—C3B | −54.46 (17) | C4A—C5A—C6A—C1A | −1.8 (3) |
| C2A—C1A—C6A—C5A | 2.1 (2) | C1A—C11A—C12A—C13A | 178.94 (15) |
| C6A—C1A—C11A—C12A | 158.54 (17) | C11A—C12A—C13A—O13A | −5.0 (2) |
| C11A—C1A—C6A—C5A | −178.16 (16) | C11A—C12A—C13A—O14A | 175.97 (16) |
| C2A—C1A—C11A—C12A | −21.7 (3) | N1B—C2B—C3B—O4B | 57.95 (17) |
| C6A—C1A—C2A—C3A | −0.8 (2) | O4B—C5B—C6B—N1B | −57.43 (18) |
| C11A—C1A—C2A—C3A | 179.41 (16) |
| H··· | ||||
| N1 | 0.94 (2) | 1.77 (2) | 2.7052 (17) | 170 (2) |
| N1 | 0.94 (2) | 1.73 (2) | 2.6643 (17) | 172 (2) |
| N1 | 0.94 (2) | 2.57 (2) | 3.1868 (17) | 123 (1) |
| C4 | 0.95 | 2.46 | 3.393 (2) | 167 |
| C11 | 0.95 | 2.48 | 2.812 (2) | 101 |
| C6 | 0.99 | 2.37 | 3.234 (2) | 145 |
Hydrogen-bond geometry (, )
|
|
| H |
|
|
|---|---|---|---|---|
| N1 | 0.94(2) | 1.77(2) | 2.7052(17) | 170(2) |
| N1 | 0.94(2) | 1.73(2) | 2.6643(17) | 172(2) |
| N1 | 0.94(2) | 2.57(2) | 3.1868(17) | 123(1) |
| C4 | 0.95 | 2.46 | 3.393(2) | 167 |
| C6 | 0.99 | 2.37 | 3.234(2) | 145 |
Symmetry codes: (i) ; (ii) ; (iii) .