Literature DB >> 26594551

Crystal structure of 2-[4(E)-2,6-bis-(4-chloro-phen-yl)-3-ethyl-piperidin-4-yl-idene]acetamide.

K Priya1, K Saravanan1, S Selvanayagam2, S Kabilan1.   

Abstract

In the title piperidine derivative, C21H22Cl2N2O, the piperidine ring adopts a chair conformation. The chloro-phenyl rings are oriented at an angle of 45.59 (14)° with respect to each other. In the crystal, mol-ecules are linked via N-H⋯O hydrogen bonds, forming C(4) chains along [100]. The chains are linked by C-H⋯O hydrogen bonds, forming sheets parallel to the ab plane. Within the sheets, there are N-H⋯π inter-actions present. The crystal studied was refined as an inversion twin.

Entities:  

Keywords:  N—H⋯O hydrogen bonds; N—H⋯π inter­actions; crystal structure; piperidine derivatives

Year:  2015        PMID: 26594551      PMCID: PMC4645048          DOI: 10.1107/S2056989015018666

Source DB:  PubMed          Journal:  Acta Crystallogr E Crystallogr Commun


Related literature

For background to piperidienes, their properties and syntheses, see: Deopura et al. (2008 ▸); Greenberg et al. (2000 ▸); Johnsson (2004 ▸); Katritzky et al. (1989 ▸); Kornblum & Singaram (1979 ▸); Moorthy & Singhal (2005 ▸); Prostakov & Gaivoronskaya (1978 ▸); Yu et al. (2002 ▸); Zabicky (1970 ▸).

Experimental

Crystal data

C21H22Cl2N2O M = 389.30 Orthorhombic, a = 8.3293 (2) Å b = 12.2924 (3) Å c = 19.3226 (4) Å V = 1978.39 (8) Å3 Z = 4 Mo Kα radiation μ = 0.34 mm−1 T = 296 K 0.22 × 0.20 × 0.18 mm

Data collection

Bruker SMART APEX CCD area-detector diffractometer 31733 measured reflections 4427 independent reflections 4220 reflections with I > 2σ(I) R int = 0.022

Refinement

R[F 2 > 2σ(F 2)] = 0.035 wR(F 2) = 0.097 S = 1.04 4427 reflections 248 parameters 4 restraints H atoms treated by a mixture of independent and constrained refinement Δρmax = 0.40 e Å−3 Δρmin = −0.30 e Å−3 Absolute structure: Refined as an inversion twin Absolute structure parameter: 0.37 (7)

Data collection: SMART (Bruker, 2001 ▸); cell refinement: SAINT (Bruker, 2001 ▸); data reduction: SAINT; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▸); program(s) used to refine structure: SHELXL2014/7 (Sheldrick, 2015 ▸); molecular graphics: ORTEP-3 for Windows (Farrugia, 2012 ▸) and PLATON (Spek, 2009 ▸); software used to prepare material for publication: SHELXL2014/7 and PLATON. Crystal structure: contains datablock(s) I, global. DOI: 10.1107/S2056989015018666/su5218sup1.cif Structure factors: contains datablock(s) I. DOI: 10.1107/S2056989015018666/su5218Isup2.hkl Click here for additional data file. . DOI: 10.1107/S2056989015018666/su5218fig1.tif The mol­ecular structure of the title compound, with atom labelling. Displacement ellipsoids are drawn at the 30% probability level. Click here for additional data file. c . DOI: 10.1107/S2056989015018666/su5218fig2.tif Crystal packing of the title compound, viewed along the c axis. The N—H⋯O and C-H⋯O hydrogen bonds are shown as dashed lines (see Table 1). For clarity H atoms not involved in these hydrogen bonds have been omitted. Click here for additional data file. . DOI: 10.1107/S2056989015018666/su5218fig3.tif Crystal packing of the title compound, showing the N—H⋯π inter­actions as dashed lines (see Table 1). For clarity H atoms not involved in these inter­actions have been omitted. CCDC reference: 1064003 Additional supporting information: crystallographic information; 3D view; checkCIF report
C21H22Cl2N2ODx = 1.307 Mg m3
Mr = 389.30Mo Kα radiation, λ = 0.71073 Å
Orthorhombic, Pna21Cell parameters from 24148 reflections
a = 8.3293 (2) Åθ = 2.2–27.4°
b = 12.2924 (3) ŵ = 0.34 mm1
c = 19.3226 (4) ÅT = 296 K
V = 1978.39 (8) Å3Block, colourless
Z = 40.22 × 0.20 × 0.18 mm
F(000) = 816
Bruker SMART APEX CCD area-detector diffractometerRint = 0.022
Radiation source: fine-focus sealed tubeθmax = 27.5°, θmin = 2.0°
ω scansh = −10→10
31733 measured reflectionsk = −15→15
4427 independent reflectionsl = −25→23
4220 reflections with I > 2σ(I)
Refinement on F2Secondary atom site location: difference Fourier map
Least-squares matrix: fullHydrogen site location: mixed
R[F2 > 2σ(F2)] = 0.035H atoms treated by a mixture of independent and constrained refinement
wR(F2) = 0.097w = 1/[σ2(Fo2) + (0.0559P)2 + 0.4463P] where P = (Fo2 + 2Fc2)/3
S = 1.04(Δ/σ)max < 0.001
4427 reflectionsΔρmax = 0.40 e Å3
248 parametersΔρmin = −0.29 e Å3
4 restraintsAbsolute structure: Refined as an inversion twin
Primary atom site location: structure-invariant direct methodsAbsolute structure parameter: 0.37 (7)
Geometry. All esds (except the esd in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell esds are taken into account individually in the estimation of esds in distances, angles and torsion angles; correlations between esds in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell esds is used for estimating esds involving l.s. planes.
Refinement. Refined as a 2-component inversion twin
xyzUiso*/Ueq
Cl10.04419 (14)0.50344 (7)0.45059 (5)0.0738 (3)
Cl20.93853 (17)0.89463 (11)−0.00442 (7)0.1046 (5)
O1−0.1377 (2)1.14174 (17)0.30563 (13)0.0563 (5)
N10.3564 (2)0.88167 (15)0.23773 (11)0.0350 (4)
N20.0334 (3)1.2760 (2)0.33460 (15)0.0547 (6)
C10.1001 (3)0.6176 (2)0.40293 (14)0.0424 (6)
C20.0568 (4)0.7187 (2)0.42740 (14)0.0464 (6)
H2−0.00330.72540.46770.056*
C30.1046 (3)0.8104 (2)0.39085 (14)0.0432 (5)
H30.07990.87910.40800.052*
C40.1888 (3)0.80111 (17)0.32911 (12)0.0323 (4)
C50.2270 (3)0.69817 (19)0.30503 (13)0.0358 (5)
H50.28180.69070.26340.043*
C60.1841 (3)0.60526 (19)0.34250 (14)0.0402 (5)
H60.21220.53640.32670.048*
C70.2364 (3)0.90357 (17)0.29068 (12)0.0332 (5)
H70.28240.95490.32410.040*
C80.0906 (3)0.95793 (18)0.25622 (14)0.0361 (5)
H8A0.04330.90930.22240.043*
H8B0.00990.97510.29070.043*
C90.1484 (2)1.06071 (18)0.22138 (13)0.0336 (5)
C100.2759 (2)1.03897 (18)0.16737 (12)0.0328 (4)
H100.23080.98710.13410.039*
C110.4174 (2)0.98078 (18)0.20494 (13)0.0326 (4)
H110.45971.02920.24090.039*
C120.5523 (2)0.95166 (19)0.15563 (13)0.0346 (5)
C130.6907 (3)1.0149 (2)0.15428 (18)0.0477 (6)
H130.70321.07070.18640.057*
C140.8102 (3)0.9962 (3)0.1058 (2)0.0583 (8)
H140.90141.03980.10470.070*
C150.7925 (4)0.9128 (3)0.05980 (18)0.0587 (8)
C160.6613 (4)0.8458 (3)0.06195 (18)0.0600 (8)
H160.65300.78740.03150.072*
C170.5407 (3)0.8655 (2)0.10996 (16)0.0470 (6)
H170.45120.82040.11140.056*
C180.3314 (3)1.1388 (2)0.12639 (14)0.0401 (5)
H18A0.36251.19550.15860.048*
H18B0.42551.11940.09950.048*
C190.2027 (4)1.1833 (2)0.07772 (17)0.0519 (7)
H19A0.24401.24550.05350.078*
H19B0.17311.12820.04490.078*
H19C0.11001.20430.10410.078*
C200.1091 (3)1.16038 (19)0.24254 (13)0.0368 (5)
H200.16101.21800.22080.044*
C21−0.0092 (3)1.18930 (19)0.29731 (14)0.0393 (5)
H1N0.430 (3)0.850 (3)0.2575 (17)0.050 (9)*
H2NA−0.032 (3)1.298 (3)0.3633 (15)0.047 (9)*
H2NB0.125 (2)1.301 (3)0.334 (2)0.066 (11)*
U11U22U33U12U13U23
Cl10.1153 (8)0.0524 (4)0.0536 (4)−0.0239 (4)0.0060 (5)0.0144 (3)
Cl20.1058 (8)0.1019 (8)0.1062 (9)0.0398 (7)0.0651 (8)0.0203 (7)
O10.0416 (10)0.0438 (10)0.0835 (16)0.0000 (8)0.0188 (10)−0.0017 (10)
N10.0271 (9)0.0326 (9)0.0453 (11)0.0044 (7)−0.0004 (8)0.0075 (8)
N20.0546 (14)0.0479 (13)0.0615 (16)−0.0027 (11)0.0157 (13)−0.0105 (12)
C10.0502 (14)0.0401 (12)0.0370 (13)−0.0066 (10)−0.0053 (11)0.0088 (10)
C20.0533 (14)0.0520 (15)0.0339 (12)0.0017 (12)0.0073 (11)0.0025 (10)
C30.0492 (14)0.0391 (12)0.0413 (13)0.0082 (10)0.0035 (11)−0.0012 (10)
C40.0303 (9)0.0321 (10)0.0345 (11)0.0019 (8)−0.0046 (9)0.0032 (8)
C50.0326 (10)0.0372 (11)0.0375 (12)−0.0005 (9)0.0011 (9)−0.0016 (9)
C60.0454 (13)0.0317 (11)0.0436 (13)−0.0005 (9)−0.0047 (11)−0.0017 (9)
C70.0315 (10)0.0293 (10)0.0387 (12)−0.0006 (8)−0.0021 (9)0.0009 (8)
C80.0265 (9)0.0305 (10)0.0514 (14)0.0017 (8)0.0029 (9)0.0078 (9)
C90.0247 (9)0.0319 (10)0.0443 (12)0.0013 (8)−0.0018 (9)0.0068 (9)
C100.0271 (9)0.0308 (9)0.0406 (12)0.0001 (8)−0.0003 (8)0.0019 (9)
C110.0254 (9)0.0326 (10)0.0399 (12)−0.0016 (8)−0.0016 (8)−0.0008 (9)
C120.0280 (9)0.0342 (10)0.0416 (12)0.0036 (8)−0.0007 (9)0.0041 (9)
C130.0318 (11)0.0512 (14)0.0602 (16)−0.0026 (10)0.0024 (12)−0.0017 (13)
C140.0344 (13)0.0653 (19)0.075 (2)0.0031 (12)0.0135 (13)0.0118 (16)
C150.0528 (16)0.0614 (18)0.0619 (18)0.0242 (14)0.0213 (14)0.0157 (14)
C160.079 (2)0.0479 (15)0.0534 (17)0.0151 (15)0.0114 (16)−0.0061 (12)
C170.0484 (14)0.0404 (12)0.0522 (16)0.0003 (11)0.0026 (12)−0.0026 (11)
C180.0355 (11)0.0383 (11)0.0465 (14)0.0017 (9)0.0071 (10)0.0073 (10)
C190.0494 (15)0.0527 (15)0.0537 (16)0.0108 (12)0.0062 (13)0.0176 (13)
C200.0338 (10)0.0308 (10)0.0457 (13)0.0001 (8)0.0032 (10)0.0057 (9)
C210.0387 (12)0.0299 (11)0.0494 (14)0.0060 (9)0.0053 (10)0.0065 (9)
Cl1—C11.742 (3)C9—C201.332 (3)
Cl2—C151.752 (3)C9—C101.513 (3)
O1—C211.230 (3)C10—C181.531 (3)
N1—C71.455 (3)C10—C111.558 (3)
N1—C111.464 (3)C10—H100.9800
N1—H1N0.821 (14)C11—C121.516 (3)
N2—C211.334 (4)C11—H110.9800
N2—H2NA0.824 (14)C12—C171.381 (4)
N2—H2NB0.824 (14)C12—C131.390 (3)
C1—C61.370 (4)C13—C141.386 (4)
C1—C21.378 (4)C13—H130.9300
C2—C31.389 (4)C14—C151.365 (5)
C2—H20.9300C14—H140.9300
C3—C41.388 (4)C15—C161.370 (5)
C3—H30.9300C16—C171.389 (4)
C4—C51.385 (3)C16—H160.9300
C4—C71.515 (3)C17—H170.9300
C5—C61.399 (3)C18—C191.528 (4)
C5—H50.9300C18—H18A0.9700
C6—H60.9300C18—H18B0.9700
C7—C81.538 (3)C19—H19A0.9600
C7—H70.9800C19—H19B0.9600
C8—C91.510 (3)C19—H19C0.9600
C8—H8A0.9700C20—C211.489 (4)
C8—H8B0.9700C20—H200.9300
C7—N1—C11112.88 (17)C11—C10—H10107.3
C7—N1—H1N106 (3)N1—C11—C12109.44 (18)
C11—N1—H1N110 (2)N1—C11—C10108.71 (17)
C21—N2—H2NA117 (2)C12—C11—C10112.1 (2)
C21—N2—H2NB123 (3)N1—C11—H11108.8
H2NA—N2—H2NB120 (4)C12—C11—H11108.8
C6—C1—C2121.7 (2)C10—C11—H11108.8
C6—C1—Cl1119.9 (2)C17—C12—C13118.3 (2)
C2—C1—Cl1118.4 (2)C17—C12—C11122.1 (2)
C1—C2—C3118.9 (2)C13—C12—C11119.6 (2)
C1—C2—H2120.6C14—C13—C12121.0 (3)
C3—C2—H2120.6C14—C13—H13119.5
C4—C3—C2121.0 (2)C12—C13—H13119.5
C4—C3—H3119.5C15—C14—C13119.1 (3)
C2—C3—H3119.5C15—C14—H14120.4
C5—C4—C3118.7 (2)C13—C14—H14120.4
C5—C4—C7122.3 (2)C14—C15—C16121.2 (3)
C3—C4—C7119.0 (2)C14—C15—Cl2118.8 (3)
C4—C5—C6120.9 (2)C16—C15—Cl2119.9 (3)
C4—C5—H5119.6C15—C16—C17119.5 (3)
C6—C5—H5119.6C15—C16—H16120.3
C1—C6—C5118.8 (2)C17—C16—H16120.3
C1—C6—H6120.6C12—C17—C16120.7 (3)
C5—C6—H6120.6C12—C17—H17119.7
N1—C7—C4111.75 (18)C16—C17—H17119.7
N1—C7—C8108.56 (19)C19—C18—C10113.2 (2)
C4—C7—C8111.50 (18)C19—C18—H18A108.9
N1—C7—H7108.3C10—C18—H18A108.9
C4—C7—H7108.3C19—C18—H18B108.9
C8—C7—H7108.3C10—C18—H18B108.9
C9—C8—C7107.72 (18)H18A—C18—H18B107.8
C9—C8—H8A110.2C18—C19—H19A109.5
C7—C8—H8A110.2C18—C19—H19B109.5
C9—C8—H8B110.2H19A—C19—H19B109.5
C7—C8—H8B110.2C18—C19—H19C109.5
H8A—C8—H8B108.5H19A—C19—H19C109.5
C20—C9—C8123.6 (2)H19B—C19—H19C109.5
C20—C9—C10123.1 (2)C9—C20—C21126.9 (2)
C8—C9—C10112.56 (19)C9—C20—H20116.6
C9—C10—C18115.28 (18)C21—C20—H20116.6
C9—C10—C11106.90 (18)O1—C21—N2122.7 (3)
C18—C10—C11112.36 (18)O1—C21—C20123.7 (2)
C9—C10—H10107.3N2—C21—C20113.5 (2)
C18—C10—H10107.3
C6—C1—C2—C3−2.2 (4)C7—N1—C11—C10−62.6 (2)
Cl1—C1—C2—C3178.2 (2)C9—C10—C11—N157.4 (2)
C1—C2—C3—C42.7 (4)C18—C10—C11—N1−175.2 (2)
C2—C3—C4—C5−1.1 (4)C9—C10—C11—C12178.48 (18)
C2—C3—C4—C7179.2 (2)C18—C10—C11—C12−54.1 (3)
C3—C4—C5—C6−1.0 (3)N1—C11—C12—C1745.3 (3)
C7—C4—C5—C6178.6 (2)C10—C11—C12—C17−75.4 (3)
C2—C1—C6—C50.1 (4)N1—C11—C12—C13−136.7 (2)
Cl1—C1—C6—C5179.7 (2)C10—C11—C12—C13102.6 (3)
C4—C5—C6—C11.5 (4)C17—C12—C13—C143.6 (4)
C11—N1—C7—C4−173.73 (18)C11—C12—C13—C14−174.5 (3)
C11—N1—C7—C862.9 (2)C12—C13—C14—C15−1.3 (5)
C5—C4—C7—N1−14.2 (3)C13—C14—C15—C16−1.9 (5)
C3—C4—C7—N1165.5 (2)C13—C14—C15—Cl2176.3 (2)
C5—C4—C7—C8107.5 (3)C14—C15—C16—C172.7 (5)
C3—C4—C7—C8−72.8 (3)Cl2—C15—C16—C17−175.5 (2)
N1—C7—C8—C9−58.3 (2)C13—C12—C17—C16−2.8 (4)
C4—C7—C8—C9178.2 (2)C11—C12—C17—C16175.2 (3)
C7—C8—C9—C20−111.6 (2)C15—C16—C17—C12−0.3 (5)
C7—C8—C9—C1059.3 (3)C9—C10—C18—C19−68.9 (3)
C20—C9—C10—C18−13.2 (3)C11—C10—C18—C19168.3 (2)
C8—C9—C10—C18175.8 (2)C8—C9—C20—C21−7.2 (4)
C20—C9—C10—C11112.5 (2)C10—C9—C20—C21−177.2 (2)
C8—C9—C10—C11−58.5 (2)C9—C20—C21—O1−39.1 (4)
C7—N1—C11—C12174.66 (19)C9—C20—C21—N2144.3 (3)
D—H···AD—HH···AD···AD—H···A
N2—H2NB···O1i0.82 (1)2.17 (2)2.973 (3)165 (4)
C6—H6···O1ii0.932.553.454 (3)163
N1—H1N···Cgii0.82 (1)2.85 (4)3.626 (2)157 (3)
Table 1

Hydrogen-bond geometry (, )

Cg is the centroid of the C1C6 ring.

DHA DHHA D A DHA
N2H2NBO1i 0.82(1)2.17(2)2.973(3)165(4)
C6H6O1ii 0.932.553.454(3)163
N1H1N Cg ii 0.82(1)2.85(4)3.626(2)157(3)

Symmetry codes: (i) ; (ii) .

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