Literature DB >> 26594544

Crystal structure of (E)-4-meth-oxy-2-{[(5-methyl-pyridin-2-yl)imino]-meth-yl}phenol.

Farook Adam1, Md Azharul Arafath1, Rosenani Anwaeul Haque1, Mohd Rizal Razali1.   

Abstract

The mol-ecule of the title Schiff base compound, C14H14N2O2, displays an E conformation with respect the imine C=N double bond. The mol-ecule is approximately planar, with the dihedral angle formed by the planes of the pyridine and benzene rings being 5.72 (6)°. There is an intra-molecular hydrogen bond involving the phenolic H and imine N atoms.

Entities:  

Keywords:  N-heterocycle; Schiff base; crystal structure; intra­molecular hydrogen bond

Year:  2015        PMID: 26594544      PMCID: PMC4645057          DOI: 10.1107/S2056989015018113

Source DB:  PubMed          Journal:  Acta Crystallogr E Crystallogr Commun


Related literature

For the structure of related N-heterocyclic n class="Chemical">Schiff base compounds, see: Sahebalzamani et al. (2011 ▸); Rawat & Singh (2015 ▸); Thakar et al. (2015 ▸); Salam et al. (2011 ▸).

Experimental

Crystal data

C14H14N2O2 M = 242.27 Monoclinic a = 12.7082 (12) Å b = 4.7446 (4) Å c = 21.124 (2) Å β = 105.525 (2)° V = 1227.21 (19) Å3 Z = 4 Mo Kα radiation μ = 0.09 mm−1 T = 294 K 0.41 × 0.35 × 0.12 mm

Data collection

Bruker APEXII CCD diffractometer Absorption correction: multi-scan (SABABS; Bruker, 2014 ▸) T min = 0.030, T max = 0.262 10950 measured reflections 2848 independent reflections 1910 reflections with I > 2σ(I) R int = 0.028

Refinement

R[F 2 > 2σ(F 2)] = 0.044 wR(F 2) = 0.151 S = 1.07 2848 reflections 170 parameters H atoms treated by a mixture of independent and constrained refinement Δρmax = 0.17 e Å−3 Δρmin = −0.18 e Å−3

Data collection: APEX2 (Bruker, 2014 ▸); cell refinement: SAINT (Bruker, 2014 ▸); data reduction: SAINT; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▸); program(s) used to refine structure: SHELXL2013 (Sheldrick, 2015 ▸); molecular graphics: SHELXTL (Sheldrick, 2008 ▸); software used to prepare material for publication: SHELXTL. Crystal structure: contains datablock(s) I. DOI: 10.1107/S2056989015018113/rz5166sup1.cif Structure factors: contains datablock(s) I. DOI: 10.1107/S2056989015018113/rz5166Isup2.hkl Click here for additional data file. Supporting information file. DOI: 10.1107/S2056989015018113/rz5166Isup3.cml Click here for additional data file. . DOI: 10.1107/S2056989015018113/rz5166fig1.tif The mol­ecular structure of the title compound with displacement ellipsoids drawn at the 30% probability level. The dashed line indicates an intra­moleculn class="Chemical">ar hydrogen bond. Click here for additional data file. b . DOI: 10.1107/S2056989015018113/rz5166fig2.tif Packing of the title compound compound viewed down the b axis. Click here for additional data file. . DOI: 10.1107/S2056989015018113/rz5166fig3.tif Synthesis of the title compound. CCDC reference: 1048553 Additional supporting information: crystallographic information; 3D view; checkCIF report
C14H14N2O2F(000) = 512
Mr = 242.27Dx = 1.311 Mg m3
Monoclinic, P21/nMelting point: 380 K
a = 12.7082 (12) ÅMo Kα radiation, λ = 0.71073 Å
b = 4.7446 (4) Åθ = 1.7–27.6°
c = 21.124 (2) ŵ = 0.09 mm1
β = 105.525 (2)°T = 294 K
V = 1227.21 (19) Å3Block, purple
Z = 40.41 × 0.35 × 0.12 mm
Bruker APEXII CCD diffractometer1910 reflections with I > 2σ(I)
φ and ω scansRint = 0.028
Absorption correction: multi-scan (SABABS; Bruker, 2014)θmax = 27.6°, θmin = 1.7°
Tmin = 0.030, Tmax = 0.262h = −16→14
10950 measured reflectionsk = −6→6
2848 independent reflectionsl = −27→27
Refinement on F20 restraints
Least-squares matrix: fullHydrogen site location: mixed
R[F2 > 2σ(F2)] = 0.044H atoms treated by a mixture of independent and constrained refinement
wR(F2) = 0.151w = 1/[σ2(Fo2) + (0.0755P)2 + 0.121P] where P = (Fo2 + 2Fc2)/3
S = 1.07(Δ/σ)max < 0.001
2848 reflectionsΔρmax = 0.17 e Å3
170 parametersΔρmin = −0.18 e Å3
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
xyzUiso*/UeqOcc. (<1)
O10.11027 (10)0.5504 (3)0.07471 (7)0.0866 (5)
O20.52254 (10)0.4026 (3)0.24106 (6)0.0762 (4)
N10.57565 (9)−0.2914 (3)0.07413 (6)0.0527 (3)
N20.55236 (9)0.0280 (3)0.15589 (6)0.0495 (3)
C10.63754 (12)−0.4827 (3)0.05470 (8)0.0543 (4)
H1A0.6101−0.56320.01340.065*
C20.73934 (11)−0.5698 (3)0.09138 (7)0.0476 (4)
C30.77704 (12)−0.4503 (4)0.15259 (8)0.0558 (4)
H3A0.8446−0.50330.17970.067*
C40.71504 (12)−0.2527 (4)0.17389 (7)0.0548 (4)
H4A0.7403−0.17070.21520.066*
C50.61512 (10)−0.1780 (3)0.13323 (7)0.0445 (3)
C60.45685 (12)0.0882 (3)0.12034 (8)0.0521 (4)
H6A0.4309−0.00230.08010.063*
C70.38731 (11)0.2931 (3)0.14055 (7)0.0487 (4)
C80.42234 (12)0.4410 (3)0.19963 (7)0.0536 (4)
C90.35180 (14)0.6348 (4)0.21589 (8)0.0630 (5)
H9A0.37500.73800.25450.076*
C100.24841 (14)0.6764 (3)0.17591 (9)0.0621 (4)
H10A0.20210.80530.18800.074*
C110.21273 (13)0.5282 (4)0.11786 (9)0.0593 (4)
C120.28284 (12)0.3399 (4)0.10047 (8)0.0583 (4)
H12A0.25960.24220.06100.070*
C130.80422 (14)−0.7829 (4)0.06515 (9)0.0651 (5)
H13A0.8653−0.84430.09990.098*0.61 (2)
H13B0.8302−0.69890.03080.098*0.61 (2)
H13C0.7587−0.94160.04790.098*0.61 (2)
H13D0.8763−0.71100.06920.098*0.39 (2)
H13E0.7689−0.81910.01970.098*0.39 (2)
H13F0.8090−0.95470.08970.098*0.39 (2)
C140.03899 (15)0.7589 (5)0.08715 (13)0.0898 (7)
H14A−0.02740.75880.05230.135*
H14B0.07320.94040.08950.135*
H14C0.02270.71920.12810.135*
H1O20.5562 (19)0.261 (5)0.2213 (13)0.120 (9)*
U11U22U33U12U13U23
O10.0597 (7)0.0913 (10)0.1072 (10)0.0322 (7)0.0198 (7)−0.0079 (8)
O20.0739 (8)0.0858 (10)0.0632 (7)0.0210 (7)0.0084 (6)−0.0106 (7)
N10.0450 (6)0.0544 (7)0.0554 (7)0.0084 (6)0.0076 (5)−0.0070 (6)
N20.0510 (7)0.0454 (7)0.0547 (7)0.0090 (5)0.0186 (5)0.0028 (6)
C10.0491 (8)0.0565 (9)0.0558 (8)0.0042 (7)0.0113 (6)−0.0122 (7)
C20.0453 (7)0.0406 (7)0.0595 (8)0.0022 (6)0.0182 (6)0.0003 (7)
C30.0449 (7)0.0614 (10)0.0567 (8)0.0126 (7)0.0057 (6)0.0021 (8)
C40.0527 (8)0.0620 (10)0.0461 (7)0.0114 (7)0.0067 (6)−0.0049 (7)
C50.0448 (7)0.0409 (7)0.0494 (7)0.0047 (6)0.0151 (6)0.0012 (6)
C60.0520 (8)0.0489 (8)0.0578 (8)0.0094 (7)0.0187 (7)0.0000 (7)
C70.0524 (8)0.0419 (7)0.0576 (8)0.0073 (6)0.0247 (7)0.0058 (7)
C80.0619 (9)0.0489 (8)0.0553 (8)0.0079 (7)0.0248 (7)0.0076 (7)
C90.0803 (11)0.0557 (9)0.0618 (9)0.0118 (9)0.0342 (9)−0.0001 (8)
C100.0730 (10)0.0500 (9)0.0774 (11)0.0155 (8)0.0448 (9)0.0074 (8)
C110.0554 (9)0.0545 (9)0.0749 (10)0.0134 (7)0.0293 (8)0.0078 (8)
C120.0557 (8)0.0558 (9)0.0663 (9)0.0131 (8)0.0213 (7)−0.0019 (8)
C130.0633 (9)0.0536 (9)0.0842 (11)0.0102 (8)0.0297 (9)−0.0057 (9)
C140.0614 (10)0.0771 (13)0.1362 (19)0.0267 (10)0.0357 (11)0.0035 (13)
O1—C111.379 (2)C7—C121.388 (2)
O1—C141.413 (2)C7—C81.397 (2)
O2—C81.3505 (19)C8—C91.390 (2)
O2—H1O20.95 (3)C9—C101.373 (2)
N1—C51.3282 (18)C9—H9A0.9300
N1—C11.3356 (18)C10—C111.381 (2)
N2—C61.2771 (18)C10—H10A0.9300
N2—C51.4231 (17)C11—C121.379 (2)
C1—C21.381 (2)C12—H12A0.9300
C1—H1A0.9300C13—H13A0.9600
C2—C31.375 (2)C13—H13B0.9600
C2—C131.501 (2)C13—H13C0.9600
C3—C41.376 (2)C13—H13D0.9600
C3—H3A0.9300C13—H13E0.9600
C4—C51.3754 (19)C13—H13F0.9600
C4—H4A0.9300C14—H14A0.9600
C6—C71.4526 (19)C14—H14B0.9600
C6—H6A0.9300C14—H14C0.9600
C11—O1—C14118.00 (16)C10—C9—H9A119.4
C8—O2—H1O2105.5 (15)C8—C9—H9A119.4
C5—N1—C1117.31 (12)C9—C10—C11120.38 (14)
C6—N2—C5119.06 (13)C9—C10—H10A119.8
N1—C1—C2124.82 (14)C11—C10—H10A119.8
N1—C1—H1A117.6C12—C11—O1115.88 (16)
C2—C1—H1A117.6C12—C11—C10118.98 (16)
C3—C2—C1116.25 (13)O1—C11—C10125.14 (14)
C3—C2—C13122.49 (14)C11—C12—C7121.46 (16)
C1—C2—C13121.26 (14)C11—C12—H12A119.3
C2—C3—C4120.18 (13)C7—C12—H12A119.3
C2—C3—H3A119.9C2—C13—H13A109.5
C4—C3—H3A119.9C2—C13—H13B109.5
C5—C4—C3119.02 (14)H13A—C13—H13B109.5
C5—C4—H4A120.5C2—C13—H13C109.5
C3—C4—H4A120.5H13A—C13—H13C109.5
N1—C5—C4122.41 (13)H13B—C13—H13C109.5
N1—C5—N2119.32 (12)C2—C13—H13D109.5
C4—C5—N2118.27 (13)C2—C13—H13E109.5
N2—C6—C7122.28 (14)H13D—C13—H13E109.5
N2—C6—H6A118.9C2—C13—H13F109.5
C7—C6—H6A118.9H13D—C13—H13F109.5
C12—C7—C8119.25 (13)H13E—C13—H13F109.5
C12—C7—C6119.06 (14)O1—C14—H14A109.5
C8—C7—C6121.69 (14)O1—C14—H14B109.5
O2—C8—C9119.18 (15)H14A—C14—H14B109.5
O2—C8—C7122.08 (13)O1—C14—H14C109.5
C9—C8—C7118.74 (15)H14A—C14—H14C109.5
C10—C9—C8121.17 (16)H14B—C14—H14C109.5
C5—N1—C1—C2−0.3 (2)C12—C7—C8—O2179.28 (14)
N1—C1—C2—C31.0 (2)C6—C7—C8—O20.2 (2)
N1—C1—C2—C13−178.93 (14)C12—C7—C8—C9−1.1 (2)
C1—C2—C3—C4−0.9 (2)C6—C7—C8—C9179.78 (13)
C13—C2—C3—C4178.97 (14)O2—C8—C9—C10−178.66 (14)
C2—C3—C4—C50.3 (2)C7—C8—C9—C101.7 (2)
C1—N1—C5—C4−0.5 (2)C8—C9—C10—C11−0.9 (2)
C1—N1—C5—N2179.64 (12)C14—O1—C11—C12−174.24 (16)
C3—C4—C5—N10.5 (2)C14—O1—C11—C106.3 (3)
C3—C4—C5—N2−179.64 (13)C9—C10—C11—C12−0.6 (2)
C6—N2—C5—N13.8 (2)C9—C10—C11—O1178.92 (15)
C6—N2—C5—C4−176.11 (13)O1—C11—C12—C7−178.37 (14)
C5—N2—C6—C7179.11 (12)C10—C11—C12—C71.2 (3)
N2—C6—C7—C12−177.58 (14)C8—C7—C12—C11−0.3 (2)
N2—C6—C7—C81.5 (2)C6—C7—C12—C11178.81 (14)
D—H···AD—HH···AD···AD—H···A
O2—H1O2···N20.95 (2)1.76 (3)2.6276 (19)150 (2)
Table 1

Hydrogen-bond geometry (, )

DHA DHHA D A DHA
O2H1O2N20.95(2)1.76(3)2.6276(19)150(2)
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