Literature DB >> 26594472

Crystal structure of 1-(5-bromo-1-benzo-furan-2-yl)ethanone oxime.

G Krishnaswamy1, P Krishna Murthy1, R Nivedita Desai1, P A Suchetan1, D B Aruna Kumar1.   

Abstract

The title compound, C10H8BrNO2, is almost planar (r.m.s. deviation for the non-n class="Disease">H atoms = 0.031 Å) and the conformation across the C=N bond is trans. Further, the O atom of the benzo-furan ring is syn to the N atom of the oxime group. In the crystal, inversion dimers linked by pairs of O-H⋯N hydrogen bonds generate R 2 (2)(6) loops. Very weak aromatic π-π stacking inter-actions [centroid-centroid separations = 3.9100 (12) and 3.9447 (12) Å] are also observed.

Entities:  

Keywords:  1-(5-bromo­benzo­furan-2-yl) ethanone oxime; crystal structure; hydrogen bonding; π–π stacking inter­actions

Year:  2015        PMID: 26594472      PMCID: PMC4647387          DOI: 10.1107/S205698901501751X

Source DB:  PubMed          Journal:  Acta Crystallogr E Crystallogr Commun


Related literature

For the various biological activities of the benzo­furan moiety, see: Rida et al. (2006 ▸); Manna et al. (2010 ▸); Patil et al. (2010 ▸); Patel et al. (2006 ▸). For the anti­fungal activity of (benzo­furan-2-yl) ken class="Chemical">oximes, see: Demirayak et al. (2002 ▸). For related structures, see: Aruna Kumar et al. (2014 ▸).

Experimental

Crystal data

C10H8BrNO2 M = 254.08 Monoclinic, a = 5.9548 (6) Å b = 9.4897 (10) Å c = 17.2906 (19) Å β = 96.943 (6)° V = 969.91 (18) Å3 Z = 4 Mo Kα radiation μ = 4.21 mm−1 T = 296 K 0.32 × 0.25 × 0.21 mm

Data collection

Bruker APEXII diffractometer Absorption correction: multi-scan (SADABS; Bruker, 2009 ▸) T min = 0.294, T max = 0.413 10152 measured reflections 2766 independent reflections 1937 reflections with I > 2σ(I) R int = 0.023

Refinement

R[F 2 > 2σ(F 2)] = 0.033 wR(F 2) = 0.096 S = 1.01 2766 reflections 129 parameters H-atom parameters constrained Δρmax = 0.29 e Å−3 Δρmin = −0.33 e Å−3

Data collection: APEX2 (Bruker, 2009 ▸); cell refinement: SAIn class="Chemical">NT-Plus (Bruker, 2009 ▸); data reduction: SAINT-Plus; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▸); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▸); molecular graphics: Mercury (Macrae et al., 2008 ▸); software used to prepare material for publication: SHELXL97. Crystal structure: contains datablock(s) I. DOI: 10.1107/S205698901501751X/hb7505sup1.cif Structure factors: contains datablock(s) I. DOI: 10.1107/S205698901501751X/hb7505Isup2.hkl Click here for additional data file. Supporting information file. DOI: 10.1107/S205698901501751X/hb7505Isup3.cml Click here for additional data file. . DOI: 10.1107/S205698901501751X/hb7505fig1.tif Mol­ecular structure of the title compound, showing displacement ellipsoids drawn at the 50% probability level. Click here for additional data file. . DOI: 10.1107/S205698901501751X/hb7505fig2.tif Crystal packing of the title compound displaying O—H⋯N and π–π inter­actions. CCDC reference: 1425831 Additional supporting information: crystallographic information; 3D view; checkCIF report
C10H8BrNO2F(000) = 504
Mr = 254.08Prism
Monoclinic, P21/nDx = 1.740 Mg m3
Hall symbol: -P 2ynMo Kα radiation, λ = 0.71073 Å
a = 5.9548 (6) ÅCell parameters from 125 reflections
b = 9.4897 (10) Åθ = 3.5–29.9°
c = 17.2906 (19) ŵ = 4.21 mm1
β = 96.943 (6)°T = 296 K
V = 969.91 (18) Å3Prism, colourless
Z = 40.32 × 0.25 × 0.21 mm
Bruker APEXII diffractometer1937 reflections with I > 2σ(I)
Radiation source: fine-focus sealed tubeRint = 0.023
Graphite monochromatorθmax = 29.9°, θmin = 3.5°
phi and φ scansh = −8→7
Absorption correction: multi-scan (SADABS; Bruker, 2009)k = −13→10
Tmin = 0.294, Tmax = 0.413l = −18→24
10152 measured reflections1 standard reflections every 2 reflections
2766 independent reflections intensity decay: 0.5%
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.033Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.096H-atom parameters constrained
S = 1.01w = 1/[σ2(Fo2) + (0.0563P)2 + 0.0157P] where P = (Fo2 + 2Fc2)/3
2766 reflections(Δ/σ)max = 0.001
129 parametersΔρmax = 0.29 e Å3
0 restraintsΔρmin = −0.33 e Å3
Geometry. All s.u.'s (except the s.u. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell s.u.'s are taken into account individually in the estimation of s.u.'s in distances, angles and torsion angles; correlations between s.u.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell s.u.'s is used for estimating s.u.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > 2σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
C80.5278 (3)−0.2686 (2)−0.00305 (11)0.0391 (4)
C10.3056 (3)0.0480 (2)0.16815 (12)0.0447 (5)
C20.5215 (3)0.0179 (2)0.20434 (11)0.0492 (5)
H20.57450.06260.25090.059*
C30.6569 (3)−0.0767 (2)0.17233 (12)0.0492 (5)
H30.8014−0.09790.19610.059*
C40.5691 (3)−0.1394 (2)0.10298 (11)0.0390 (4)
C50.3543 (3)−0.1120 (2)0.06601 (11)0.0403 (4)
C60.2169 (3)−0.0159 (2)0.09927 (12)0.0470 (5)
H60.07140.00430.07610.056*
C70.3324 (3)−0.1982 (2)−0.00278 (12)0.0437 (5)
H70.2065−0.2041−0.04010.052*
C90.6021 (3)−0.3724 (2)−0.05598 (11)0.0412 (4)
C100.4500 (4)−0.4102 (3)−0.12802 (12)0.0513 (5)
H10A0.4955−0.3594−0.17160.077*
H10B0.2969−0.3859−0.12150.077*
H10C0.4598−0.5096−0.13730.077*
N10.7969 (3)−0.42793 (19)−0.03532 (10)0.0445 (4)
O10.6789 (2)−0.23533 (16)0.06169 (8)0.0440 (3)
O20.8582 (2)−0.52765 (17)−0.08799 (9)0.0548 (4)
H2A0.9720−0.5695−0.06880.082*
Br10.13019 (4)0.18428 (3)0.214769 (13)0.05936 (13)
U11U22U33U12U13U23
C80.0409 (10)0.0392 (10)0.0356 (10)−0.0021 (8)−0.0023 (7)0.0055 (8)
C10.0505 (11)0.0403 (11)0.0447 (11)0.0004 (8)0.0111 (8)0.0024 (9)
C20.0551 (12)0.0525 (13)0.0388 (11)−0.0044 (10)0.0009 (8)−0.0040 (9)
C30.0452 (10)0.0586 (14)0.0412 (11)−0.0014 (9)−0.0058 (8)−0.0012 (10)
C40.0362 (9)0.0410 (11)0.0394 (10)−0.0003 (8)0.0032 (7)0.0031 (8)
C50.0401 (9)0.0391 (11)0.0405 (10)−0.0005 (8)0.0002 (7)0.0062 (8)
C60.0442 (10)0.0492 (12)0.0464 (12)0.0043 (9)0.0010 (8)0.0035 (9)
C70.0391 (10)0.0498 (13)0.0403 (11)0.0035 (8)−0.0037 (8)−0.0002 (9)
C90.0429 (10)0.0416 (11)0.0384 (10)−0.0034 (8)0.0028 (8)0.0051 (9)
C100.0520 (11)0.0552 (14)0.0444 (12)0.0022 (10)−0.0030 (9)−0.0011 (10)
N10.0447 (9)0.0462 (10)0.0420 (9)0.0057 (7)0.0028 (7)−0.0024 (7)
O10.0379 (7)0.0496 (8)0.0420 (7)0.0041 (6)−0.0052 (5)−0.0014 (6)
O20.0562 (9)0.0591 (10)0.0493 (8)0.0142 (7)0.0066 (6)−0.0069 (7)
Br10.0661 (2)0.05433 (19)0.06028 (19)0.00532 (9)0.01851 (12)−0.00638 (10)
C8—C71.343 (3)C5—C61.394 (3)
C8—O11.385 (2)C5—C71.437 (3)
C8—C91.449 (3)C6—H60.9300
C1—C61.383 (3)C7—H70.9300
C1—C21.390 (3)C9—N11.285 (3)
C1—Br11.901 (2)C9—C101.493 (3)
C2—C31.367 (3)C10—H10A0.9600
C2—H20.9300C10—H10B0.9600
C3—C41.383 (3)C10—H10C0.9600
C3—H30.9300N1—O21.392 (2)
C4—O11.371 (2)O2—H2A0.8200
C4—C51.384 (2)
C7—C8—O1111.24 (18)C1—C6—C5117.40 (17)
C7—C8—C9132.16 (16)C1—C6—H6121.3
O1—C8—C9116.56 (17)C5—C6—H6121.3
C6—C1—C2122.23 (19)C8—C7—C5107.11 (16)
C6—C1—Br1119.44 (15)C8—C7—H7126.4
C2—C1—Br1118.33 (15)C5—C7—H7126.4
C3—C2—C1120.75 (18)N1—C9—C8115.94 (16)
C3—C2—H2119.6N1—C9—C10124.7 (2)
C1—C2—H2119.6C8—C9—C10119.31 (17)
C2—C3—C4117.00 (18)C9—C10—H10A109.5
C2—C3—H3121.5C9—C10—H10B109.5
C4—C3—H3121.5H10A—C10—H10B109.5
O1—C4—C3125.70 (16)C9—C10—H10C109.5
O1—C4—C5110.89 (16)H10A—C10—H10C109.5
C3—C4—C5123.4 (2)H10B—C10—H10C109.5
C4—C5—C6119.22 (18)C9—N1—O2113.35 (16)
C4—C5—C7105.18 (17)C4—O1—C8105.58 (15)
C6—C5—C7135.61 (16)N1—O2—H2A109.5
C6—C1—C2—C30.5 (3)C9—C8—C7—C5178.2 (2)
Br1—C1—C2—C3−178.43 (16)C4—C5—C7—C8−0.3 (2)
C1—C2—C3—C40.2 (3)C6—C5—C7—C8179.5 (2)
C2—C3—C4—O1179.3 (2)C7—C8—C9—N1−174.5 (2)
C2—C3—C4—C5−0.6 (3)O1—C8—C9—N13.3 (3)
O1—C4—C5—C6−179.65 (18)C7—C8—C9—C103.9 (4)
C3—C4—C5—C60.3 (3)O1—C8—C9—C10−178.38 (19)
O1—C4—C5—C70.2 (2)C8—C9—N1—O2179.41 (17)
C3—C4—C5—C7−179.9 (2)C10—C9—N1—O21.1 (3)
C2—C1—C6—C5−0.9 (3)C3—C4—O1—C8−179.9 (2)
Br1—C1—C6—C5178.09 (15)C5—C4—O1—C80.0 (2)
C4—C5—C6—C10.4 (3)C7—C8—O1—C4−0.3 (2)
C7—C5—C6—C1−179.3 (2)C9—C8—O1—C4−178.48 (16)
O1—C8—C7—C50.4 (2)
D—H···AD—HH···AD···AD—H···A
O2—H2A···N1i0.822.132.808 (2)140
Table 1

Hydrogen-bond geometry (, )

DHA DHHA D A DHA
O2H2AN1i 0.822.132.808(2)140

Symmetry code: (i) .

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