Literature DB >> 26594452

Crystal structure of (E)-2-(4-chloro-benzyl-idene)-3,4-di-hydro-naphthalen-1(2H)-one: a second monoclinic polymorph.

Muhammad Haroon1, Tashfeen Akhtar1, Muhammad Nawaz Tahir2.   

Abstract

The title compound, C17H13ClO, is the second monoclinic polymorph to crystallize in the space group P21/c. The first polymorph crystallized with two independent mol-ecules in the asymmetric unit [Bolognesi et al. (1975 ▸). Acta Cryst. A31, S119; Z' = 2; no atomic coordinates available], whereas the title compound has Z' = 1. In the title polymorph, the dihedral angle between the plane of the benzene ring of the tetra-lone moiety and that of the 4-chloro-benzyl ring is 52.21 (11)°. The cyclo-hex-2-en-1-one ring of the tetra-lone moiety has a screw-boat conformation. In the crystal, mol-ecules are liked by pairs of C-H⋯π inter-actions forming inversion dimers. There are no other significant inter-molecular inter-actions present.

Entities:  

Keywords:  C—H⋯π inter­actions; crystal structure; α-tetra­lone

Year:  2015        PMID: 26594452      PMCID: PMC4647395          DOI: 10.1107/S2056989015016151

Source DB:  PubMed          Journal:  Acta Crystallogr E Crystallogr Commun


Related literature

For a brief description of the first monoclinic polymorph of the title compound, see: Bolognesi et al. (1975 ▸). For the crystal structures of related compounds, see: Asiri et al. (2012 ▸); Dimmock et al. (2002 ▸); Oloo et al. (2002 ▸). For the synthesis, see: Kerbal et al. (1988 ▸).

Experimental

Crystal data

C17H13ClO M = 268.72 Monoclinic, a = 13.3791 (8) Å b = 14.9352 (10) Å c = 6.7849 (3) Å β = 93.968 (3)° V = 1352.51 (14) Å3 Z = 4 Mo Kα radiation μ = 0.27 mm−1 T = 296 K 0.38 × 0.30 × 0.26 mm

Data collection

Bruker Kappa APEXII CCD diffractometer Absorption correction: multi-scan (SADABS; Bruker, 2007 ▸) T min = 0.906, T max = 0.930 11640 measured reflections 2954 independent reflections 1901 reflections with I > 2σ(I) R int = 0.029

Refinement

R[F 2 > 2σ(F 2)] = 0.051 wR(F 2) = 0.170 S = 1.05 2954 reflections 172 parameters H-atom parameters constrained Δρmax = 0.37 e Å−3 Δρmin = −0.19 e Å−3

Data collection: APEX2 (Bruker, 2007 ▸); cell refinement: SAINT (Bruker, 2007 ▸); data reduction: SAINT; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▸); program(s) used to refine structure: SHELXL2014 (Sheldrick, 2015 ▸); molecular graphics: ORTEP-3 for Windows (Farrugia, 2012 ▸) and PLATON (Spek, 2009 ▸); software used to prepare material for publication: WinGX (Farrugia, 2012 ▸) and PLATON. Crystal structure: contains datablock(s) global, I. DOI: 10.1107/S2056989015016151/su5197sup1.cif Structure factors: contains datablock(s) I. DOI: 10.1107/S2056989015016151/su5197Isup2.hkl Click here for additional data file. Supporting information file. DOI: 10.1107/S2056989015016151/su5197Isup3.cml Click here for additional data file. . DOI: 10.1107/S2056989015016151/su5197fig1.tif View of the mol­ecular structure of the title compound, with atom labelling. Displacement ellipsoids are drawn at the 50% probability level. CCDC reference: 1421217 Additional supporting information: crystallographic information; 3D view; checkCIF report
C17H13ClOF(000) = 560
Mr = 268.72Dx = 1.320 Mg m3
Monoclinic, P21/cMo Kα radiation, λ = 0.71073 Å
a = 13.3791 (8) ÅCell parameters from 1901 reflections
b = 14.9352 (10) Åθ = 2.7–27.0°
c = 6.7849 (3) ŵ = 0.27 mm1
β = 93.968 (3)°T = 296 K
V = 1352.51 (14) Å3Prism, light orange
Z = 40.38 × 0.30 × 0.26 mm
Bruker Kappa APEXII CCD diffractometer2954 independent reflections
Radiation source: fine-focus sealed tube1901 reflections with I > 2σ(I)
Graphite monochromatorRint = 0.029
Detector resolution: 7.70 pixels mm-1θmax = 27.0°, θmin = 2.7°
ω scansh = −17→17
Absorption correction: multi-scan (SADABS; Bruker, 2007)k = −19→18
Tmin = 0.906, Tmax = 0.930l = −8→8
11640 measured reflections
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.051Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.170H-atom parameters constrained
S = 1.05w = 1/[σ2(Fo2) + (0.0931P)2 + 0.1261P] where P = (Fo2 + 2Fc2)/3
2954 reflections(Δ/σ)max < 0.001
172 parametersΔρmax = 0.37 e Å3
0 restraintsΔρmin = −0.18 e Å3
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R-factors based on ALL data will be even larger.
xyzUiso*/Ueq
Cl1−0.45111 (6)0.12595 (6)0.64763 (13)0.1115 (4)
O10.01032 (15)0.14379 (12)−0.1910 (2)0.0905 (6)
C10.04921 (18)0.13078 (12)−0.0242 (3)0.0592 (5)
C20.15886 (18)0.13063 (12)0.0132 (3)0.0594 (5)
C30.2190 (2)0.16509 (15)−0.1286 (4)0.0758 (7)
H30.18930.1867−0.24710.091*
C40.3206 (2)0.16757 (17)−0.0960 (5)0.0903 (8)
H40.35970.1910−0.19180.108*
C50.3657 (2)0.13533 (18)0.0791 (5)0.0947 (9)
H50.43500.13730.10210.114*
C60.3064 (2)0.09969 (16)0.2216 (4)0.0767 (7)
H60.33690.07740.33890.092*
C70.20322 (18)0.09703 (13)0.1913 (3)0.0597 (5)
C80.13788 (16)0.05948 (14)0.3412 (3)0.0638 (6)
H8A0.17390.06050.47030.077*
H8B0.1220−0.00240.30860.077*
C90.04115 (17)0.11253 (13)0.3489 (3)0.0588 (5)
H9A−0.00180.08350.43900.071*
H9B0.05640.17210.39920.071*
C10−0.01328 (17)0.11966 (12)0.1487 (3)0.0550 (5)
C11−0.11281 (18)0.11818 (12)0.1126 (3)0.0599 (6)
H11−0.13500.1175−0.02030.072*
C12−0.19169 (17)0.11744 (12)0.2505 (3)0.0572 (5)
C13−0.28306 (18)0.07683 (15)0.1952 (3)0.0736 (6)
H13−0.29130.04870.07290.088*
C14−0.36166 (18)0.07709 (18)0.3162 (4)0.0859 (8)
H14−0.42120.04770.27820.103*
C15−0.3506 (2)0.12143 (16)0.4938 (4)0.0779 (7)
C16−0.26219 (17)0.16368 (14)0.5526 (3)0.0689 (6)
H16−0.25590.19420.67230.083*
C17−0.18321 (17)0.16064 (13)0.4338 (3)0.0614 (5)
H17−0.12290.18780.47600.074*
U11U22U33U12U13U23
Cl10.0757 (5)0.1284 (7)0.1334 (8)0.0051 (4)0.0296 (5)−0.0236 (5)
O10.1112 (14)0.1190 (15)0.0393 (8)−0.0036 (11)−0.0092 (8)0.0101 (8)
C10.0875 (16)0.0509 (11)0.0383 (10)−0.0005 (10)−0.0030 (9)0.0017 (8)
C20.0872 (15)0.0442 (10)0.0469 (10)0.0026 (9)0.0066 (10)0.0004 (8)
C30.103 (2)0.0587 (13)0.0674 (14)0.0112 (12)0.0194 (13)0.0091 (10)
C40.103 (2)0.0666 (15)0.105 (2)0.0074 (14)0.0359 (16)0.0120 (14)
C50.0834 (19)0.0756 (17)0.126 (3)0.0051 (14)0.0139 (18)−0.0056 (16)
C60.0839 (18)0.0650 (14)0.0801 (16)0.0072 (12)−0.0013 (13)−0.0022 (12)
C70.0798 (15)0.0456 (10)0.0529 (11)0.0036 (9)−0.0008 (10)−0.0052 (8)
C80.0849 (15)0.0601 (12)0.0446 (10)0.0039 (10)−0.0093 (9)0.0068 (9)
C90.0785 (14)0.0581 (11)0.0387 (9)−0.0024 (10)−0.0037 (9)0.0037 (8)
C100.0790 (15)0.0441 (10)0.0404 (10)−0.0013 (9)−0.0070 (9)0.0016 (7)
C110.0843 (16)0.0474 (11)0.0453 (10)0.0016 (9)−0.0137 (10)−0.0023 (8)
C120.0691 (13)0.0440 (10)0.0563 (11)0.0052 (8)−0.0109 (9)−0.0017 (8)
C130.0747 (15)0.0690 (14)0.0740 (14)0.0063 (12)−0.0172 (12)−0.0173 (11)
C140.0631 (15)0.0827 (17)0.109 (2)0.0007 (12)−0.0133 (14)−0.0218 (15)
C150.0698 (16)0.0701 (15)0.0940 (18)0.0099 (11)0.0064 (13)−0.0040 (13)
C160.0787 (16)0.0575 (12)0.0696 (13)0.0069 (11)−0.0009 (11)−0.0084 (10)
C170.0744 (14)0.0477 (11)0.0607 (12)−0.0011 (9)−0.0068 (10)−0.0051 (9)
Cl1—C151.759 (3)C8—H8B0.9700
O1—C11.227 (2)C9—C101.500 (3)
C1—C21.471 (3)C9—H9A0.9700
C1—C101.496 (3)C9—H9B0.9700
C2—C31.394 (3)C10—C111.337 (3)
C2—C71.402 (3)C11—C121.458 (3)
C3—C41.363 (4)C11—H110.9300
C3—H30.9300C12—C131.393 (3)
C4—C51.382 (4)C12—C171.399 (3)
C4—H40.9300C13—C141.378 (3)
C5—C61.398 (4)C13—H130.9300
C5—H50.9300C14—C151.374 (4)
C6—C71.383 (3)C14—H140.9300
C6—H60.9300C15—C161.376 (3)
C7—C81.495 (3)C16—C171.373 (3)
C8—C91.521 (3)C16—H160.9300
C8—H8A0.9700C17—H170.9300
O1—C1—C2120.87 (19)C8—C9—H9A109.3
O1—C1—C10121.1 (2)C10—C9—H9B109.3
C2—C1—C10117.97 (16)C8—C9—H9B109.3
C3—C2—C7119.8 (2)H9A—C9—H9B108.0
C3—C2—C1119.8 (2)C11—C10—C1117.49 (17)
C7—C2—C1120.46 (18)C11—C10—C9125.41 (19)
C4—C3—C2121.0 (2)C1—C10—C9117.09 (19)
C4—C3—H3119.5C10—C11—C12129.69 (18)
C2—C3—H3119.5C10—C11—H11115.2
C3—C4—C5120.1 (3)C12—C11—H11115.2
C3—C4—H4120.0C13—C12—C17117.1 (2)
C5—C4—H4120.0C13—C12—C11119.44 (18)
C4—C5—C6119.5 (3)C17—C12—C11123.31 (19)
C4—C5—H5120.2C14—C13—C12122.0 (2)
C6—C5—H5120.2C14—C13—H13119.0
C7—C6—C5121.1 (2)C12—C13—H13119.0
C7—C6—H6119.4C15—C14—C13119.0 (2)
C5—C6—H6119.4C15—C14—H14120.5
C6—C7—C2118.5 (2)C13—C14—H14120.5
C6—C7—C8122.29 (19)C14—C15—C16120.9 (2)
C2—C7—C8119.2 (2)C14—C15—Cl1119.9 (2)
C7—C8—C9111.51 (16)C16—C15—Cl1119.2 (2)
C7—C8—H8A109.3C17—C16—C15119.8 (2)
C9—C8—H8A109.3C17—C16—H16120.1
C7—C8—H8B109.3C15—C16—H16120.1
C9—C8—H8B109.3C16—C17—C12121.2 (2)
H8A—C8—H8B108.0C16—C17—H17119.4
C10—C9—C8111.52 (17)C12—C17—H17119.4
C10—C9—H9A109.3
O1—C1—C2—C314.6 (3)C2—C1—C10—C11−178.76 (17)
C10—C1—C2—C3−162.05 (18)O1—C1—C10—C9−174.51 (19)
O1—C1—C2—C7−166.10 (19)C2—C1—C10—C92.2 (2)
C10—C1—C2—C717.2 (3)C8—C9—C10—C11143.7 (2)
C7—C2—C3—C4−0.7 (3)C8—C9—C10—C1−37.3 (2)
C1—C2—C3—C4178.6 (2)C1—C10—C11—C12−173.08 (18)
C2—C3—C4—C50.3 (4)C9—C10—C11—C125.9 (3)
C3—C4—C5—C60.4 (4)C10—C11—C12—C13−151.1 (2)
C4—C5—C6—C7−0.7 (4)C10—C11—C12—C1733.0 (3)
C5—C6—C7—C20.3 (3)C17—C12—C13—C14−1.3 (3)
C5—C6—C7—C8−179.9 (2)C11—C12—C13—C14−177.4 (2)
C3—C2—C7—C60.4 (3)C12—C13—C14—C152.3 (4)
C1—C2—C7—C6−178.84 (19)C13—C14—C15—C16−1.1 (4)
C3—C2—C7—C8−179.42 (18)C13—C14—C15—Cl1177.9 (2)
C1—C2—C7—C81.3 (3)C14—C15—C16—C17−0.9 (4)
C6—C7—C8—C9142.9 (2)Cl1—C15—C16—C17180.00 (17)
C2—C7—C8—C9−37.3 (3)C15—C16—C17—C121.9 (3)
C7—C8—C9—C1054.1 (2)C13—C12—C17—C16−0.8 (3)
O1—C1—C10—C114.6 (3)C11—C12—C17—C16175.17 (19)
D—H···AD—HH···AD···AD—H···A
C13—H13···Cg1i0.932.863.552 (2)132
Table 1

Hydrogen-bond geometry (, )

Cg1 is the centroid of the C2C7 ring.

DHA DHHA D A DHA
C13H13Cg1i 0.932.863.552(2)132

Symmetry code: (i) .

  4 in total

1.  A short history of SHELX.

Authors:  George M Sheldrick
Journal:  Acta Crystallogr A       Date:  2007-12-21       Impact factor: 2.290

2.  Crystal structure refinement with SHELXL.

Authors:  George M Sheldrick
Journal:  Acta Crystallogr C Struct Chem       Date:  2015-01-01       Impact factor: 1.172

3.  2-[(E)-4-Meth-oxy-benzyl-idene]-1,2,3,4-tetra-hydro-naphthalen-1-one.

Authors:  Abdullah M Asiri; Hassan M Faidallah; Mohie E M Zayed; Seik Weng Ng; Edward R T Tiekink
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2012-06-23

4.  Structure validation in chemical crystallography.

Authors:  Anthony L Spek
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  2009-01-20
  4 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.