| Literature DB >> 26594442 |
Kittipong Chainok1, Tanwawan Duangthongyou2, Thawatchai Tuntulani3, Apinya Chuenka4, Boontana Wannalerse4.
Abstract
The complete mol-ecule of the title compound, C30H29N3O5S2, is generated by a crystallographic twofold axis: the O atom and NH group attached to the central benzene ring are statistically disordered. The dihedral angle between the naphthalene ring system and the central benzene ring is 52.99 (6)°, while the pendant naphthalene ring systems subtend a dihedral angle of 68.17 (4)°. An intra-molecular C-H⋯O hydrogen bond closes an S(6) ring. In the crystal, the mol-ecules are linked by weak C-H⋯O hydrogen bonds.Entities:
Keywords: crystal structure; dansyl derivatives; disorder; hydrogen bonding; π-stacking
Year: 2015 PMID: 26594442 PMCID: PMC4647440 DOI: 10.1107/S2056989015016199
Source DB: PubMed Journal: Acta Crystallogr E Crystallogr Commun
| C30H29N3O5S2 | |
| Monoclinic, | Mo |
| Cell parameters from 4957 reflections | |
| θ = 3.1–25.7° | |
| µ = 0.24 mm−1 | |
| β = 98.349 (4)° | |
| Block, light green | |
| 0.26 × 0.22 × 0.22 mm |
| Bruker D8 QUEST CMOS diffractometer | 3444 independent reflections |
| Radiation source: microfocus sealed x-ray tube, Incoatec Iµus | 2246 reflections with |
| GraphiteDouble Bounce Multilayer Mirror monochromator | |
| Detector resolution: 10.5 pixels mm-1 | θmax = 28.3°, θmin = 3.1° |
| ω and φ scans | |
| Absorption correction: multi-scan ( | |
| 17644 measured reflections |
| Refinement on | Primary atom site location: structure-invariant direct methods |
| Least-squares matrix: full | Hydrogen site location: inferred from neighbouring sites |
| H-atom parameters constrained | |
| (Δ/σ)max < 0.001 | |
| 3444 reflections | Δρmax = 0.26 e Å−3 |
| 186 parameters | Δρmin = −0.23 e Å−3 |
| 0 restraints |
| Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
| Occ. (<1) | |||||
| S1 | 0.69732 (3) | 0.73580 (4) | 0.32645 (3) | 0.05431 (17) | |
| N1 | 0.603 (2) | 0.709 (2) | 0.2569 (14) | 0.0418 (18) | 0.5 |
| H1 | 0.5801 | 0.7537 | 0.2215 | 0.050* | 0.5 |
| O2 | 0.77825 (10) | 0.66139 (12) | 0.33521 (10) | 0.0736 (5) | |
| O3 | 0.72349 (11) | 0.83601 (11) | 0.30878 (10) | 0.0711 (4) | |
| N2 | 0.35617 (13) | 0.82675 (13) | 0.57539 (10) | 0.0609 (5) | |
| C11 | 0.55450 (13) | 0.61136 (13) | 0.25005 (10) | 0.0433 (4) | |
| C5 | 0.49120 (13) | 0.77874 (12) | 0.49182 (10) | 0.0427 (4) | |
| C6 | 0.54736 (13) | 0.79731 (12) | 0.42414 (10) | 0.0413 (4) | |
| C1 | 0.62854 (13) | 0.72779 (13) | 0.41220 (11) | 0.0450 (4) | |
| C10 | 0.40779 (14) | 0.84536 (14) | 0.50673 (12) | 0.0495 (4) | |
| C12 | 0.60785 (15) | 0.52183 (15) | 0.24889 (12) | 0.0543 (5) | |
| H12 | 0.6806 | 0.5215 | 0.2481 | 0.065* | |
| C7 | 0.51636 (15) | 0.87928 (13) | 0.37174 (11) | 0.0500 (4) | |
| H7 | 0.5533 | 0.8940 | 0.3285 | 0.060* | |
| C4 | 0.51413 (16) | 0.69084 (14) | 0.53896 (12) | 0.0531 (5) | |
| H4 | 0.4748 | 0.6766 | 0.5810 | 0.064* | |
| C2 | 0.65034 (16) | 0.64565 (15) | 0.46148 (12) | 0.0582 (5) | |
| H2 | 0.7046 | 0.6022 | 0.4527 | 0.070* | |
| C9 | 0.37880 (17) | 0.92039 (15) | 0.45129 (13) | 0.0612 (5) | |
| H9 | 0.3220 | 0.9615 | 0.4583 | 0.073* | |
| C8 | 0.43259 (17) | 0.93625 (15) | 0.38477 (13) | 0.0611 (5) | |
| H8 | 0.4104 | 0.9876 | 0.3480 | 0.073* | |
| C13 | 0.55357 (17) | 0.43329 (16) | 0.24897 (14) | 0.0665 (6) | |
| H13 | 0.5895 | 0.3728 | 0.2476 | 0.080* | |
| C3 | 0.59130 (17) | 0.62698 (15) | 0.52481 (13) | 0.0635 (6) | |
| H3 | 0.6052 | 0.5702 | 0.5574 | 0.076* | |
| C14 | 0.41854 (19) | 0.83896 (17) | 0.65611 (13) | 0.0707 (6) | |
| H14A | 0.4905 | 0.8197 | 0.6537 | 0.106* | |
| H14B | 0.3898 | 0.7975 | 0.6951 | 0.106* | |
| H14C | 0.4165 | 0.9078 | 0.6727 | 0.106* | |
| C15 | 0.25143 (19) | 0.8715 (2) | 0.57308 (17) | 0.0878 (8) | |
| H15A | 0.2587 | 0.9419 | 0.5846 | 0.132* | |
| H15B | 0.2153 | 0.8401 | 0.6136 | 0.132* | |
| H15C | 0.2114 | 0.8620 | 0.5195 | 0.132* | |
| O1 | 0.6121 (16) | 0.7010 (16) | 0.2444 (11) | 0.0418 (18) | 0.5 |
| S1 | 0.0322 (2) | 0.0701 (4) | 0.0622 (3) | −0.0032 (2) | 0.0121 (2) | −0.0040 (3) |
| N1 | 0.035 (3) | 0.051 (3) | 0.043 (5) | 0.0008 (19) | 0.017 (2) | −0.002 (3) |
| O2 | 0.0366 (7) | 0.1019 (12) | 0.0833 (10) | 0.0177 (7) | 0.0120 (7) | −0.0060 (9) |
| O3 | 0.0528 (8) | 0.0783 (10) | 0.0848 (10) | −0.0260 (7) | 0.0188 (7) | −0.0017 (8) |
| N2 | 0.0564 (10) | 0.0708 (12) | 0.0595 (10) | 0.0057 (8) | 0.0213 (8) | −0.0053 (8) |
| C11 | 0.0430 (9) | 0.0499 (10) | 0.0401 (9) | −0.0004 (8) | 0.0161 (8) | 0.0007 (8) |
| C5 | 0.0422 (9) | 0.0435 (10) | 0.0411 (9) | 0.0018 (7) | 0.0023 (7) | −0.0002 (7) |
| C6 | 0.0387 (9) | 0.0416 (9) | 0.0426 (9) | −0.0021 (7) | 0.0023 (7) | −0.0026 (7) |
| C1 | 0.0367 (9) | 0.0517 (10) | 0.0454 (10) | 0.0024 (8) | 0.0017 (7) | −0.0020 (8) |
| C10 | 0.0474 (10) | 0.0508 (11) | 0.0509 (11) | 0.0029 (8) | 0.0088 (8) | −0.0037 (8) |
| C12 | 0.0515 (11) | 0.0591 (13) | 0.0566 (11) | 0.0084 (9) | 0.0225 (9) | 0.0023 (9) |
| C7 | 0.0572 (11) | 0.0458 (10) | 0.0478 (10) | 0.0015 (9) | 0.0101 (9) | 0.0054 (8) |
| C4 | 0.0616 (12) | 0.0523 (11) | 0.0459 (10) | 0.0048 (9) | 0.0098 (9) | 0.0076 (9) |
| C2 | 0.0543 (11) | 0.0605 (12) | 0.0585 (12) | 0.0223 (9) | 0.0033 (9) | 0.0026 (10) |
| C9 | 0.0606 (12) | 0.0543 (12) | 0.0702 (13) | 0.0212 (10) | 0.0144 (10) | 0.0039 (10) |
| C8 | 0.0715 (14) | 0.0484 (11) | 0.0626 (12) | 0.0162 (10) | 0.0074 (10) | 0.0128 (9) |
| C13 | 0.0791 (14) | 0.0509 (12) | 0.0752 (14) | 0.0108 (10) | 0.0306 (13) | 0.0021 (11) |
| C3 | 0.0775 (14) | 0.0554 (12) | 0.0570 (12) | 0.0212 (11) | 0.0078 (11) | 0.0144 (10) |
| C14 | 0.0904 (17) | 0.0706 (15) | 0.0549 (13) | 0.0006 (12) | 0.0233 (12) | −0.0004 (11) |
| C15 | 0.0640 (14) | 0.111 (2) | 0.0949 (19) | 0.0165 (14) | 0.0343 (14) | −0.0055 (15) |
| O1 | 0.035 (3) | 0.051 (3) | 0.043 (5) | 0.0008 (19) | 0.017 (2) | −0.002 (3) |
| S1—N1 | 1.58 (3) | C12—H12 | 0.9300 |
| S1—O2 | 1.4248 (14) | C12—C13 | 1.370 (3) |
| S1—O3 | 1.4189 (15) | C7—H7 | 0.9300 |
| S1—C1 | 1.7681 (18) | C7—C8 | 1.354 (3) |
| S1—O1 | 1.67 (2) | C4—H4 | 0.9300 |
| N1—H1 | 0.8600 | C4—C3 | 1.348 (3) |
| N1—C11 | 1.44 (3) | C2—H2 | 0.9300 |
| N2—C10 | 1.409 (2) | C2—C3 | 1.393 (3) |
| N2—C14 | 1.454 (3) | C9—H9 | 0.9300 |
| N2—C15 | 1.459 (3) | C9—C8 | 1.389 (3) |
| C11—C11i | 1.391 (3) | C8—H8 | 0.9300 |
| C11—C12 | 1.377 (2) | C13—C13i | 1.372 (4) |
| C11—O1 | 1.41 (2) | C13—H13 | 0.9300 |
| C5—C6 | 1.429 (2) | C3—H3 | 0.9300 |
| C5—C10 | 1.435 (2) | C14—H14A | 0.9600 |
| C5—C4 | 1.413 (2) | C14—H14B | 0.9600 |
| C6—C1 | 1.425 (2) | C14—H14C | 0.9600 |
| C6—C7 | 1.413 (2) | C15—H15A | 0.9600 |
| C1—C2 | 1.367 (3) | C15—H15B | 0.9600 |
| C10—C9 | 1.368 (3) | C15—H15C | 0.9600 |
| N1—S1—C1 | 98.6 (8) | C6—C7—H7 | 120.1 |
| O2—S1—N1 | 112.1 (9) | C8—C7—C6 | 119.74 (17) |
| O2—S1—C1 | 108.28 (9) | C8—C7—H7 | 120.1 |
| O2—S1—O1 | 105.4 (6) | C5—C4—H4 | 119.0 |
| O3—S1—N1 | 104.3 (10) | C3—C4—C5 | 121.93 (18) |
| O3—S1—O2 | 119.29 (9) | C3—C4—H4 | 119.0 |
| O3—S1—C1 | 112.27 (9) | C1—C2—H2 | 120.0 |
| O3—S1—O1 | 104.0 (7) | C1—C2—C3 | 120.02 (18) |
| O1—S1—C1 | 106.6 (6) | C3—C2—H2 | 120.0 |
| S1—N1—H1 | 118.6 | C10—C9—H9 | 119.4 |
| C11—N1—S1 | 122.8 (18) | C10—C9—C8 | 121.27 (18) |
| C11—N1—H1 | 118.6 | C8—C9—H9 | 119.4 |
| C10—N2—C14 | 116.97 (16) | C7—C8—C9 | 122.05 (18) |
| C10—N2—C15 | 116.09 (18) | C7—C8—H8 | 119.0 |
| C14—N2—C15 | 110.84 (18) | C9—C8—H8 | 119.0 |
| C11i—C11—N1 | 115.0 (10) | C12—C13—C13i | 120.37 (12) |
| C11i—C11—O1 | 121.9 (8) | C12—C13—H13 | 119.8 |
| C12—C11—N1 | 125.1 (10) | C13i—C13—H13 | 119.8 |
| C12—C11—C11i | 119.76 (11) | C4—C3—C2 | 120.24 (18) |
| C12—C11—O1 | 118.1 (8) | C4—C3—H3 | 119.9 |
| C6—C5—C10 | 119.56 (15) | C2—C3—H3 | 119.9 |
| C4—C5—C6 | 118.90 (16) | N2—C14—H14A | 109.5 |
| C4—C5—C10 | 121.37 (17) | N2—C14—H14B | 109.5 |
| C1—C6—C5 | 116.78 (15) | N2—C14—H14C | 109.5 |
| C7—C6—C5 | 118.75 (16) | H14A—C14—H14B | 109.5 |
| C7—C6—C1 | 124.40 (16) | H14A—C14—H14C | 109.5 |
| C6—C1—S1 | 121.67 (13) | H14B—C14—H14C | 109.5 |
| C2—C1—S1 | 116.02 (14) | N2—C15—H15A | 109.5 |
| C2—C1—C6 | 122.00 (17) | N2—C15—H15B | 109.5 |
| N2—C10—C5 | 118.17 (16) | N2—C15—H15C | 109.5 |
| C9—C10—N2 | 123.36 (17) | H15A—C15—H15B | 109.5 |
| C9—C10—C5 | 118.38 (17) | H15A—C15—H15C | 109.5 |
| C11—C12—H12 | 120.1 | H15B—C15—H15C | 109.5 |
| C13—C12—C11 | 119.85 (18) | C11—O1—S1 | 117.7 (13) |
| C13—C12—H12 | 120.1 | ||
| S1—N1—C11—C11i | 124.2 (13) | C6—C5—C4—C3 | 3.7 (3) |
| S1—N1—C11—C12 | −51.6 (18) | C6—C1—C2—C3 | 1.1 (3) |
| S1—C1—C2—C3 | −172.60 (16) | C6—C7—C8—C9 | 3.7 (3) |
| N1—S1—C1—C6 | −67.6 (10) | C1—S1—N1—C11 | −66.4 (15) |
| N1—S1—C1—C2 | 106.1 (10) | C1—S1—O1—C11 | −48.7 (12) |
| N1—C11—C12—C13 | 174.6 (11) | C1—C6—C7—C8 | 174.71 (18) |
| O2—S1—N1—C11 | 47.5 (16) | C1—C2—C3—C4 | −1.5 (3) |
| O2—S1—C1—C6 | 175.57 (14) | C10—C5—C6—C1 | −179.37 (15) |
| O2—S1—C1—C2 | −10.74 (18) | C10—C5—C6—C7 | −2.3 (3) |
| O2—S1—O1—C11 | 66.2 (11) | C10—C5—C4—C3 | 179.07 (19) |
| O3—S1—N1—C11 | 177.9 (12) | C10—C9—C8—C7 | −0.5 (3) |
| O3—S1—C1—C6 | 41.79 (17) | C12—C11—O1—S1 | −72.7 (11) |
| O3—S1—C1—C2 | −144.52 (15) | C7—C6—C1—S1 | −2.0 (2) |
| O3—S1—O1—C11 | −167.5 (9) | C7—C6—C1—C2 | −175.27 (19) |
| N2—C10—C9—C8 | 179.6 (2) | C4—C5—C6—C1 | −4.0 (2) |
| C11i—C11—C12—C13 | −1.0 (3) | C4—C5—C6—C7 | 173.16 (17) |
| C11i—C11—O1—S1 | 112.6 (11) | C4—C5—C10—N2 | 6.6 (3) |
| C11—C12—C13—C13i | −0.6 (4) | C4—C5—C10—C9 | −170.03 (19) |
| C5—C6—C1—S1 | 174.98 (12) | C14—N2—C10—C5 | 66.8 (2) |
| C5—C6—C1—C2 | 1.7 (3) | C14—N2—C10—C9 | −116.8 (2) |
| C5—C6—C7—C8 | −2.2 (3) | C15—N2—C10—C5 | −159.33 (19) |
| C5—C10—C9—C8 | −4.0 (3) | C15—N2—C10—C9 | 17.1 (3) |
| C5—C4—C3—C2 | −1.0 (3) | O1—S1—C1—C6 | −71.5 (8) |
| C6—C5—C10—N2 | −178.08 (16) | O1—S1—C1—C2 | 102.2 (8) |
| C6—C5—C10—C9 | 5.3 (3) | O1—C11—C12—C13 | −175.8 (9) |
| H··· | ||||
| C7—H7···O3 | 0.93 | 2.37 | 3.030 (2) | 128 |
| C13—H13···O3ii | 0.93 | 2.73 | 3.386 (2) | 129 |
Hydrogen-bond geometry (, )
|
|
| H |
|
|
|---|---|---|---|---|
| C7H7O3 | 0.93 | 2.37 | 3.030(2) | 128 |
| C13H13O3i | 0.93 | 2.73 | 3.386(2) | 129 |
Symmetry code: (i) .