| Literature DB >> 26594441 |
Tomohiko Ishii1, Tatsuya Senoo1, Akihide Yoshihara2, Kazuhiro Fukada3, Genta Sakane4.
Abstract
The title compound, C6H12O6, was crystallized from an aqueous solution of equimolar mixture of d- and l-fructose (1,3,4,5,6-penta-hydroxy-hexan-2-one, arabino-hexulose or levu-lose), and it was confirmed that d-fructose (or l-fructose) formed β-pyran-ose with a (2) C 5 (or (5) C 2) conformation. In the crystal, two O-H⋯O hydrogen bonds between the hy-droxy groups at the C-1 and C-3 positions, and at the C-4 and C-5 positions connect homochiral mol-ecules into a column along the a axis. The columns are linked by other O-H⋯O hydrogen bonds between d- and l-fructose mol-ecules, forming a three-dimensional network.Entities:
Keywords: crystal structure; hydrogen bonding; racemic compound; rare sugar
Year: 2015 PMID: 26594441 PMCID: PMC4647344 DOI: 10.1107/S2056989015016503
Source DB: PubMed Journal: Acta Crystallogr E Crystallogr Commun
| C6H12O6 | |
| Triclinic, | |
| Cu | |
| Cell parameters from 4534 reflections | |
| θ = 4.7–68.4° | |
| α = 69.120 (2)° | µ = 1.30 mm−1 |
| β = 83.907 (2)° | |
| γ = 78.381 (2)° | Block, colorless |
| 0.10 × 0.10 × 0.10 mm |
| Rigaku R-AXIS RAPID diffractometer | 1211 reflections with |
| Detector resolution: 10.000 pixels mm-1 | |
| ω scans | θmax = 68.2°, θmin = 4.7° |
| Absorption correction: multi-scan ( | |
| 6710 measured reflections | |
| 1329 independent reflections |
| Refinement on | Hydrogen site location: inferred from neighbouring sites |
| H-atom parameters constrained | |
| (Δ/σ)max < 0.001 | |
| 1329 reflections | Δρmax = 0.32 e Å−3 |
| 115 parameters | Δρmin = −0.23 e Å−3 |
| 0 restraints | Extinction correction: |
| Primary atom site location: structure-invariant direct methods | Extinction coefficient: 0.125 (6) |
| Secondary atom site location: difference Fourier map |
| Refinement. Refinement was performed using all reflections. The weighted |
| O1 | 1.19555 (19) | 0.09152 (15) | 0.87814 (12) | 0.0325 (3) | |
| O2 | 0.66671 (18) | 0.27440 (15) | 0.92243 (11) | 0.0287 (3) | |
| O3 | 0.50386 (19) | 0.33842 (16) | 0.65941 (12) | 0.0294 (3) | |
| O4 | 0.34223 (18) | 0.76120 (15) | 0.58108 (11) | 0.0264 (3) | |
| O5 | 0.81908 (18) | 0.84537 (14) | 0.60893 (12) | 0.0290 (3) | |
| O6 | 0.96847 (17) | 0.47716 (14) | 0.82413 (11) | 0.0223 (3) | |
| C1 | 1.0136 (3) | 0.1818 (2) | 0.77318 (17) | 0.0265 (4) | |
| C2 | 0.8236 (2) | 0.34747 (19) | 0.80373 (15) | 0.0195 (3) | |
| C3 | 0.6557 (2) | 0.46432 (19) | 0.67791 (15) | 0.0190 (3) | |
| C4 | 0.4906 (3) | 0.6455 (2) | 0.70256 (15) | 0.0200 (3) | |
| C5 | 0.6558 (3) | 0.77295 (19) | 0.72899 (16) | 0.0223 (3) | |
| C6 | 0.8182 (3) | 0.6457 (2) | 0.85210 (16) | 0.0254 (4) | |
| H1A | 1.30779 | 0.15812 | 0.86062 | 0.0390* | |
| H1C | 0.92594 | 0.08085 | 0.76811 | 0.0318* | |
| H1B | 1.0976 | 0.23653 | 0.68208 | 0.0318* | |
| H2A | 0.74136 | 0.16995 | 0.97716 | 0.0345* | |
| H3A | 0.55367 | 0.31042 | 0.58847 | 0.0353* | |
| H3B | 0.76216 | 0.5097 | 0.59244 | 0.0227* | |
| H4A | 0.19353 | 0.75392 | 0.60178 | 0.0317* | |
| H4B | 0.37832 | 0.60041 | 0.78545 | 0.0240* | |
| H5A | 0.74552 | 0.94902 | 0.55285 | 0.0348* | |
| H5B | 0.55062 | 0.8858 | 0.75058 | 0.0268* | |
| H6A | 0.92669 | 0.72507 | 0.86923 | 0.0305* | |
| H6B | 0.71231 | 0.59981 | 0.93633 | 0.0305* |
| O1 | 0.0202 (6) | 0.0153 (5) | 0.0465 (8) | −0.0003 (4) | −0.0014 (5) | 0.0066 (5) |
| O2 | 0.0251 (6) | 0.0190 (5) | 0.0265 (6) | 0.0006 (4) | 0.0037 (5) | 0.0074 (4) |
| O3 | 0.0292 (6) | 0.0280 (6) | 0.0361 (7) | −0.0153 (5) | −0.0002 (5) | −0.0118 (5) |
| O4 | 0.0160 (5) | 0.0236 (6) | 0.0298 (6) | −0.0001 (4) | −0.0051 (4) | 0.0019 (5) |
| O5 | 0.0208 (5) | 0.0154 (5) | 0.0385 (7) | −0.0035 (4) | −0.0014 (5) | 0.0060 (5) |
| O6 | 0.0186 (5) | 0.0164 (5) | 0.0309 (6) | −0.0004 (4) | −0.0061 (4) | −0.0071 (4) |
| C1 | 0.0223 (7) | 0.0144 (7) | 0.0389 (9) | −0.0022 (6) | −0.0001 (6) | −0.0054 (6) |
| C2 | 0.0176 (7) | 0.0123 (6) | 0.0242 (8) | −0.0039 (5) | 0.0003 (6) | −0.0007 (5) |
| C3 | 0.0177 (7) | 0.0140 (7) | 0.0233 (8) | −0.0070 (5) | −0.0006 (6) | −0.0020 (6) |
| C4 | 0.0158 (7) | 0.0163 (7) | 0.0213 (8) | −0.0018 (5) | −0.0019 (6) | 0.0013 (6) |
| C5 | 0.0198 (7) | 0.0131 (7) | 0.0315 (9) | −0.0005 (5) | −0.0002 (6) | −0.0060 (6) |
| C6 | 0.0272 (8) | 0.0199 (7) | 0.0304 (8) | −0.0015 (6) | −0.0044 (6) | −0.0107 (6) |
| O1—C1 | 1.4153 (19) | O1—H1A | 0.820 |
| O2—C2 | 1.4017 (16) | O2—H2A | 0.820 |
| O3—C3 | 1.419 (2) | O3—H3A | 0.820 |
| O4—C4 | 1.4395 (16) | O4—H4A | 0.820 |
| O5—C5 | 1.4305 (17) | O5—H5A | 0.820 |
| O6—C2 | 1.423 (2) | C1—H1C | 0.970 |
| O6—C6 | 1.4298 (19) | C1—H1B | 0.970 |
| C1—C2 | 1.520 (2) | C3—H3B | 0.980 |
| C2—C3 | 1.5304 (19) | C4—H4B | 0.980 |
| C3—C4 | 1.521 (2) | C5—H5B | 0.980 |
| C4—C5 | 1.517 (2) | C6—H6A | 0.970 |
| C5—C6 | 1.5075 (19) | C6—H6B | 0.970 |
| C2—O6—C6 | 113.25 (10) | C4—O4—H4A | 109.467 |
| O1—C1—C2 | 111.97 (14) | C5—O5—H5A | 109.473 |
| O2—C2—O6 | 111.23 (13) | O1—C1—H1C | 109.215 |
| O2—C2—C1 | 112.44 (10) | O1—C1—H1B | 109.220 |
| O2—C2—C3 | 107.69 (10) | C2—C1—H1C | 109.218 |
| O6—C2—C1 | 105.55 (11) | C2—C1—H1B | 109.221 |
| O6—C2—C3 | 109.06 (10) | H1C—C1—H1B | 107.907 |
| C1—C2—C3 | 110.86 (13) | O3—C3—H3B | 109.026 |
| O3—C3—C2 | 109.62 (10) | C2—C3—H3B | 109.028 |
| O3—C3—C4 | 110.08 (11) | C4—C3—H3B | 109.024 |
| C2—C3—C4 | 110.04 (13) | O4—C4—H4B | 109.255 |
| O4—C4—C3 | 110.05 (13) | C3—C4—H4B | 109.253 |
| O4—C4—C5 | 109.74 (10) | C5—C4—H4B | 109.254 |
| C3—C4—C5 | 109.27 (11) | O5—C5—H5B | 109.808 |
| O5—C5—C4 | 110.97 (14) | C4—C5—H5B | 109.810 |
| O5—C5—C6 | 107.71 (11) | C6—C5—H5B | 109.807 |
| C4—C5—C6 | 108.69 (11) | O6—C6—H6A | 109.512 |
| O6—C6—C5 | 110.67 (14) | O6—C6—H6B | 109.511 |
| C1—O1—H1A | 109.469 | C5—C6—H6A | 109.511 |
| C2—O2—H2A | 109.478 | C5—C6—H6B | 109.513 |
| C3—O3—H3A | 109.476 | H6A—C6—H6B | 108.082 |
| C2—O6—C6—C5 | −61.73 (13) | C1—C2—C3—C4 | −172.62 (10) |
| C6—O6—C2—O2 | −58.74 (12) | O3—C3—C4—O4 | −62.10 (13) |
| C6—O6—C2—C1 | 179.03 (9) | O3—C3—C4—C5 | 177.33 (9) |
| C6—O6—C2—C3 | 59.88 (13) | C2—C3—C4—O4 | 176.97 (10) |
| O1—C1—C2—O2 | −68.49 (15) | C2—C3—C4—C5 | 56.41 (12) |
| O1—C1—C2—O6 | 52.95 (13) | O4—C4—C5—O5 | −58.98 (13) |
| O1—C1—C2—C3 | 170.90 (9) | O4—C4—C5—C6 | −177.25 (10) |
| O2—C2—C3—O3 | −57.21 (15) | C3—C4—C5—O5 | 61.77 (12) |
| O2—C2—C3—C4 | 63.99 (14) | C3—C4—C5—C6 | −56.50 (14) |
| O6—C2—C3—O3 | −178.02 (10) | O5—C5—C6—O6 | −61.97 (15) |
| O6—C2—C3—C4 | −56.82 (13) | C4—C5—C6—O6 | 58.34 (14) |
| C1—C2—C3—O3 | 66.18 (13) |
| H··· | ||||
| O1—H1 | 0.82 | 2.28 | 2.9202 (14) | 135 |
| O2—H2 | 0.82 | 2.60 | 2.9721 (14) | 110 |
| O2—H2 | 0.82 | 1.93 | 2.7224 (13) | 161 |
| O3—H3 | 0.82 | 1.96 | 2.7831 (18) | 177 |
| O4—H4 | 0.82 | 2.01 | 2.7893 (13) | 158 |
| O5—H5 | 0.82 | 2.05 | 2.8431 (12) | 163 |
Hydrogen-bond geometry (, )
|
|
| H |
|
|
|---|---|---|---|---|
| O1H1 | 0.82 | 2.28 | 2.9202(14) | 135 |
| O2H2 | 0.82 | 1.93 | 2.7224(13) | 161 |
| O3H3 | 0.82 | 1.96 | 2.7831(18) | 177 |
| O4H4 | 0.82 | 2.01 | 2.7893(13) | 158 |
| O5H5 | 0.82 | 2.05 | 2.8431(12) | 163 |
Symmetry codes: (i) ; (ii) ; (iii) ; (iv) ; (v) .