Literature DB >> 26592117

Revisiting Vibrational Circular Dichroism Spectra of (S)-(+)-Carvone and (1S,2R,5S)-(+)-Menthol Using SimIR/VCD Method.

Jian Shen1, Yi Li1, Roy Vaz1, Hiroshi Izumi2.   

Abstract

The VCD spectra of (S)-(+)-carvone and (1S,2R,5S)-(+)-menthol are recalculated using the DFT method with extended conformation and configuration spaces. The calculated individual and averaged spectra are compared against observed ones using the previously reported similarity index, SV. It is found that the SV population forms approximately two normal distributions, depending on whether a spectrum matches the observed one or not. This statistical character can be used to estimate the error in absolute configuration (AC) assessments. To avoid erroneous AC assignments and incomplete conformation searching, it is advisible to employ a minimum |SV| of 0.2 and maximize it using conformation averaging. It is demonstrated that this approach is suitable and robust for flexible chiral molecules.

Entities:  

Year:  2012        PMID: 26592117     DOI: 10.1021/ct300110q

Source DB:  PubMed          Journal:  J Chem Theory Comput        ISSN: 1549-9618            Impact factor:   6.006


  2 in total

1.  Enantiomeric characterization and structure elucidation of Otamixaban.

Authors:  Jian Shen; Jiping Yang; Winfried Heyse; Harald Schweitzer; Norbert Nagel; Doris Andert; Chengyue Zhu; Vincent Morrison; Gregory A Nemeth; Teng-Man Chen; Zhicheng Zhao; Timothy A Ayers; Yong-Mi Choi
Journal:  J Pharm Anal       Date:  2013-11-26

2.  The Assignment of the Absolute Configuration of Non-Cyclic Sesquiterpenes by Vibrational and Electronic Circular Dichroism: The Example of Chiliadenus lopadusanus Metabolites.

Authors:  Giuseppe Mazzeo; Alessio Cimmino; Giovanna Longhi; Marco Masi; Antonio Evidente; Sergio Abbate
Journal:  Biomolecules       Date:  2021-12-18
  2 in total

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