Literature DB >> 26592112

Many-Overlapping-Body (MOB) Expansion: A Generalized Many Body Expansion for Nondisjoint Monomers in Molecular Fragmentation Calculations of Covalent Molecules.

Nicholas J Mayhall1, Krishnan Raghavachari1.   

Abstract

A common approach to approximating the full electronic energy of a molecular system is to first divide the system into nonoverlapping (disjoint) fragments and then compute the two-body or three-body fragment-fragment interactions using a many-body expansion. In this paper, we demonstrate that, by using a set of fragments which overlap with each other, a many-body expansion converges much faster than using nonoverlapping fragments. A new hierarchical fragmentation scheme is therefore proposed which generalizes the many-body expansion expressions and describes a simple procedure for generating the set of overlapping monomers. This method is referred to as the many-overlapping-body (MOB) expansion and is evaluated with two example systems: four dendritic isomers of C29H60 and 10 conformational isomers of a polypeptide molecule. In both examples, the MOB methodology significantly improves the two-body corrected energies.

Year:  2012        PMID: 26592112     DOI: 10.1021/ct300366e

Source DB:  PubMed          Journal:  J Chem Theory Comput        ISSN: 1549-9618            Impact factor:   6.006


  4 in total

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Authors:  M Askerka; J Ho; E R Batista; J A Gascón; V S Batista
Journal:  Methods Enzymol       Date:  2016-07-15       Impact factor: 1.600

2.  Analysis of the Errors in the Electrostatically Embedded Many-Body Expansion of the Energy and the Correlation Energy for Zn and Cd Coordination Complexes with Five and Six Ligands and Use of the Analysis to Develop a Generally Successful Fragmentation Strategy.

Authors:  Elbek K Kurbanov; Hannah R Leverentz; Donald G Truhlar; Elizabeth A Amin
Journal:  J Chem Theory Comput       Date:  2013-06-11       Impact factor: 6.006

3.  A variational linear-scaling framework to build practical, efficient next-generation orbital-based quantum force fields.

Authors:  Timothy J Giese; Haoyuan Chen; Thakshila Dissanayake; George M Giambaşu; Hugh Heldenbrand; Ming Huang; Erich R Kuechler; Tai-Sung Lee; Maria T Panteva; Brian K Radak; Darrin M York
Journal:  J Chem Theory Comput       Date:  2013-03-12       Impact factor: 6.006

4.  Linear-Scaling Systematic Molecular Fragmentation Approach for Perturbation Theory and Coupled-Cluster Methods.

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Journal:  J Chem Theory Comput       Date:  2022-08-16       Impact factor: 6.578

  4 in total

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