Literature DB >> 26586267

Automated Code Engine for Graphical Processing Units: Application to the Effective Core Potential Integrals and Gradients.

Chenchen Song1,2, Lee-Ping Wang1,2, Todd J Martínez1,2.   

Abstract

We present an automated code engine (ACE) that automatically generates optimized kernels for computing integrals in electronic structure theory on a given graphical processing unit (GPU) computing platform. The code generator in ACE creates multiple code variants with different memory and floating point operation trade-offs. A graph representation is created as the foundation of the code generation, which allows the code generator to be extended to various types of integrals. The code optimizer in ACE determines the optimal code variant and GPU configurations for a given GPU computing platform by scanning over all possible code candidates and then choosing the best-performing code candidate for each kernel. We apply ACE to the optimization of effective core potential integrals and gradients. It is observed that the best code candidate varies with differing angular momentum, floating point precision, and type of GPU being used, which shows that the ACE may be a powerful tool in adapting to fast evolving GPU architectures.

Year:  2015        PMID: 26586267     DOI: 10.1021/acs.jctc.5b00790

Source DB:  PubMed          Journal:  J Chem Theory Comput        ISSN: 1549-9618            Impact factor:   6.006


  4 in total

1.  TeraChem: Accelerating electronic structure and ab initio molecular dynamics with graphical processing units.

Authors:  Stefan Seritan; Christoph Bannwarth; B Scott Fales; Edward G Hohenstein; Sara I L Kokkila-Schumacher; Nathan Luehr; James W Snyder; Chenchen Song; Alexey V Titov; Ivan S Ufimtsev; Todd J Martínez
Journal:  J Chem Phys       Date:  2020-06-14       Impact factor: 3.488

2.  Molecular modeling and molecular dynamics simulation studies on thyroid hormone receptor from Rattus norvegicus: role of conserved water molecules.

Authors:  Soumita Mukherjee; Subrata Dasgupta; Utpal Adhikari; Sujit Sankar Panja
Journal:  J Mol Model       Date:  2021-04-08       Impact factor: 1.810

3.  Dynamics of recombination via conical intersection in a semiconductor nanocrystal.

Authors:  Wei-Tao Peng; B Scott Fales; Yinan Shu; Benjamin G Levine
Journal:  Chem Sci       Date:  2017-11-13       Impact factor: 9.825

4.  Quantum chemical studies of redox properties and conformational changes of a four-center iron CO2 reduction electrocatalyst.

Authors:  Hyesu Jang; Yudong Qiu; Marshall E Hutchings; Minh Nguyen; Louise A Berben; Lee-Ping Wang
Journal:  Chem Sci       Date:  2018-01-29       Impact factor: 9.825

  4 in total

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