Literature DB >> 26583983

A Caveat on SCC-DFTB and Noncovalent Interactions Involving Sulfur Atoms.

Riccardo Petraglia1, Clemence Corminboeuf1.   

Abstract

Accurate modeling of noncovalent interactions involving sulfur today is ubiquitous, particularly with regard to the role played by sulfur-containing heterocycles in the field of organic electronics. The density functional tight binding (DFTB) method offers a good compromise between computational efficiency and accuracy, enabling the treatment of thousands of atoms at a fraction of the cost of density functional theory (DFT) evaluations. DFTB is an approximate quantum chemical approach that is based on the DFT total energy expression. Here, we address a critical issue inherent to the DFTB parametrization, which prevents the use of the DFTB framework for simulating noncovalent interactions involving sulfur atoms and precludes its combination with a dispersion correction. (1-5) Dramatic examples of structural patterns relevant to the field of organic electronics illustrate that DFTB delivers erroneous (i.e., qualitatively wrong) results involving spurious binding.

Entities:  

Year:  2013        PMID: 26583983     DOI: 10.1021/ct4003948

Source DB:  PubMed          Journal:  J Chem Theory Comput        ISSN: 1549-9618            Impact factor:   6.006


  4 in total

1.  Nucleic acid reactivity: challenges for next-generation semiempirical quantum models.

Authors:  Ming Huang; Timothy J Giese; Darrin M York
Journal:  J Comput Chem       Date:  2015-05-06       Impact factor: 3.376

2.  Benchmark Study of the SCC-DFTB Approach for a Biomolecular Proton Channel.

Authors:  Ruibin Liang; Jessica M J Swanson; Gregory A Voth
Journal:  J Chem Theory Comput       Date:  2014-01-14       Impact factor: 6.006

3.  Comparison of Molecular Recognition of Trimethyllysine and Trimethylthialysine by Epigenetic Reader Proteins.

Authors:  Jordi C J Hintzen; Jordi Poater; Kiran Kumar; Abbas H K Al Temimi; Bas J G E Pieters; Robert S Paton; F Matthias Bickelhaupt; Jasmin Mecinović
Journal:  Molecules       Date:  2020-04-21       Impact factor: 4.411

4.  Parameterization of DFTB3/3OB for Sulfur and Phosphorus for Chemical and Biological Applications.

Authors:  Michael Gaus; Xiya Lu; Marcus Elstner; Qiang Cui
Journal:  J Chem Theory Comput       Date:  2014-03-12       Impact factor: 6.006

  4 in total

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