Literature DB >> 26583982

X-ray Constrained Extremely Localized Molecular Orbitals: Theory and Critical Assessment of the New Technique.

Alessandro Genoni1,2.   

Abstract

Following the X-ray constrained wave function approach proposed by Jayatilaka, we have devised a new technique that allows to extract molecular orbitals strictly localized on small molecular fragments from sets of experimental X-ray structure factors amplitudes. Since the novel strategy enables to obtain electron distributions that have quantum mechanical features and that can be easily interpreted in terms of traditional chemical concepts, the method can be also considered as a new useful tool for the determination and the analysis of charge densities from high-resolution X-ray experiments. In this paper, we describe in detail the theory of the new technique, which, in comparison to our preliminary work, has been improved both treating the effects of isotropic secondary extinctions and introducing a new protocol to halt the fitting procedure against the experimental X-ray scattering data. The performances of the novel strategy have been studied both in function of the basis-sets flexibility and in function of the quality of the considered crystallographic data. The tests performed on four different systems (α-glycine, l-cysteine, (aminomethyl)phosphonic acid and N-(trifluoromethyl)formamide) have shown that the achievement of good statistical agreements with the experimental measures mainly depends on the quality of the crystal structures (i.e., geometry positions and thermal parameters) used in the X-ray constrained calculations. Finally, given the reliable transferability of the obtained Extremely Localized Molecular Orbitals (ELMOs), we envisage to exploit the novel approach to construct new ELMOs databases suited to the development of linear-scaling methods for the refinement of macromolecular crystal structures.

Entities:  

Year:  2013        PMID: 26583982     DOI: 10.1021/ct400293m

Source DB:  PubMed          Journal:  J Chem Theory Comput        ISSN: 1549-9618            Impact factor:   6.006


  5 in total

1.  Observation of the asphericity of 4f-electron density and its relation to the magnetic anisotropy axis in single-molecule magnets.

Authors:  Chen Gao; Alessandro Genoni; Song Gao; Shangda Jiang; Alessandro Soncini; Jacob Overgaard
Journal:  Nat Chem       Date:  2019-12-16       Impact factor: 24.427

Review 2.  Modelling the experimental electron density: only the synergy of various approaches can tackle the new challenges.

Authors:  Piero Macchi; Jean-Michel Gillet; Francis Taulelle; Javier Campo; Nicolas Claiser; Claude Lecomte
Journal:  IUCrJ       Date:  2015-05-14       Impact factor: 4.769

3.  Accurate Bond Lengths to Hydrogen Atoms from Single-Crystal X-ray Diffraction by Including Estimated Hydrogen ADPs and Comparison to Neutron and QM/MM Benchmarks.

Authors:  Birger Dittrich; Jens Lübben; Stefan Mebs; Armin Wagner; Peter Luger; Ralf Flaig
Journal:  Chemistry       Date:  2017-03-15       Impact factor: 5.236

Review 4.  Quantum crystallography.

Authors:  Simon Grabowsky; Alessandro Genoni; Hans-Beat Bürgi
Journal:  Chem Sci       Date:  2017-03-27       Impact factor: 9.825

5.  Can X-ray constrained Hartree-Fock wavefunctions retrieve electron correlation?

Authors:  Alessandro Genoni; Leonardo H R Dos Santos; Benjamin Meyer; Piero Macchi
Journal:  IUCrJ       Date:  2017-01-10       Impact factor: 4.769

  5 in total

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