Literature DB >> 26583390

Three-Dimensional RISM Integral Equation Theory for Polarizable Solute Models.

Franziska Hoffgaard1, Jochen Heil1, Stefan M Kast1.   

Abstract

Modeling solute polarizability is a key ingredient for improving the description of solvation phenomena. In recent years, polarizable molecular mechanics force fields have emerged that circumvent the limitations of classical fixed charge force fields by the ability to adapt their electrostatic potential distribution to a polarizing environment. Solvation phenomena are characterized by the solute's excess chemical potential, which can be computed by expensive fully atomistic free energy simulations. The alternative is to employ an implicit solvent model, which poses a challenge to the formulation of the solute-solvent interaction term within a polarizable framework. Here, we adapt the three-dimensional reference interaction site model (3D RISM) integral equation theory as a solvent model, which analytically yields the chemical potential, to the polarizable AMOEBA force field using an embedding cluster (EC-RISM) strategy. The methodology is analogous to our earlier approach to the coupling of a quantum-chemical solute description with a classical 3D RISM solvent. We describe the conceptual physical and algorithmic basis as well as the performance for several benchmark cases as a proof of principle. The results consistently show reasonable agreement between AMOEBA and quantum-chemical free energies in solution in general and allow for separate assessment of energetic and solvation-related contributions. We find that, depending on the parametrization, AMOEBA reproduces the chemical potential in better agreement with reference quantum-chemical calculations than the intramolecular energies, which suggests possible routes toward systematic improvement of polarizable force fields.

Year:  2013        PMID: 26583390     DOI: 10.1021/ct400699q

Source DB:  PubMed          Journal:  J Chem Theory Comput        ISSN: 1549-9618            Impact factor:   6.006


  7 in total

1.  The SAMPL6 challenge on predicting aqueous pKa values from EC-RISM theory.

Authors:  Nicolas Tielker; Lukas Eberlein; Stefan Güssregen; Stefan M Kast
Journal:  J Comput Aided Mol Des       Date:  2018-08-02       Impact factor: 3.686

2.  The SAMPL5 challenge for embedded-cluster integral equation theory: solvation free energies, aqueous pK a, and cyclohexane-water log D.

Authors:  Nicolas Tielker; Daniel Tomazic; Jochen Heil; Thomas Kloss; Sebastian Ehrhart; Stefan Güssregen; K Friedemann Schmidt; Stefan M Kast
Journal:  J Comput Aided Mol Des       Date:  2016-08-23       Impact factor: 3.686

3.  Acidity in DMSO from the embedded cluster integral equation quantum solvation model.

Authors:  Jochen Heil; Daniel Tomazic; Simon Egbers; Stefan M Kast
Journal:  J Mol Model       Date:  2014-03-25       Impact factor: 1.810

4.  Towards a converged strategy for including microsolvation in reaction mechanism calculations.

Authors:  Rebecca Sure; Moad El Mahdali; Alex Plajer; Peter Deglmann
Journal:  J Comput Aided Mol Des       Date:  2021-01-09       Impact factor: 3.686

5.  The SAMPL6 challenge on predicting octanol-water partition coefficients from EC-RISM theory.

Authors:  Nicolas Tielker; Daniel Tomazic; Lukas Eberlein; Stefan Güssregen; Stefan M Kast
Journal:  J Comput Aided Mol Des       Date:  2020-01-24       Impact factor: 3.686

6.  Implementation and Optimization of the Embedded Cluster Reference Interaction Site Model with Atomic Charges.

Authors:  Ádám Ganyecz; Mihály Kállay
Journal:  J Phys Chem A       Date:  2022-04-08       Impact factor: 2.944

7.  Quantum-mechanical property prediction of solvated drug molecules: what have we learned from a decade of SAMPL blind prediction challenges?

Authors:  Nicolas Tielker; Lukas Eberlein; Gerhard Hessler; K Friedemann Schmidt; Stefan Güssregen; Stefan M Kast
Journal:  J Comput Aided Mol Des       Date:  2020-10-20       Impact factor: 3.686

  7 in total

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