| Literature DB >> 26583204 |
Rahul Sharma, Pushpendra Singh, W J Loughry, J Mitchell Lockhart, W Barry Inman, Malcolm S Duthie, Maria T Pena, Luis A Marcos, David M Scollard, Stewart T Cole, Richard W Truman.
Abstract
Nine-banded armadillos (Dasypus novemcinctus) are naturally infected with Mycobacterium leprae and have been implicated in zoonotic transmission of leprosy. Early studies found this disease mainly in Texas and Louisiana, but armadillos in the southeastern United States appeared to be free of infection. We screened 645 armadillos from 8 locations in the southeastern United States not known to harbor enzootic leprosy for M. leprae DNA and antibodies. We found M. leprae-infected armadillos at each location, and 106 (16.4%) animals had serologic/PCR evidence of infection. Using single-nucleotide polymorphism variable number tandem repeat genotyping/genome sequencing, we detected M. leprae genotype 3I-2-v1 among 35 armadillos. Seven armadillos harbored a newly identified genotype (3I-2-v15). In comparison, 52 human patients from the same region were infected with 31 M. leprae types. However, 42.3% (22/52) of patients were infected with 1 of the 2 M. leprae genotype strains associated with armadillos. The geographic range and complexity of zoonotic leprosy is expanding.Entities:
Keywords: Dasypus novemcinctus; Hansen disease; Hansen’s disease; Mycobacterium leprae; armadillos; bacteria; biomarkers; epidemiology; genotype; leprosy; nine-banded armadillo; southeastern United States; zoonoses; zoonotic leprosy
Mesh:
Year: 2015 PMID: 26583204 PMCID: PMC4672434 DOI: 10.3201/eid2112.150501
Source DB: PubMed Journal: Emerg Infect Dis ISSN: 1080-6040 Impact factor: 6.883
Figure 1Eight locations in 4 states in the southeastern United States where armadillos were sampled and tested for infection with Mycobacterium leprae. Inset (shaded region) indicates location of the 4 states. DSO, DeSoto National Forest, Mississippi; CON, Conecuh National Forest, Alabama; PBH, Pebble Hill Plantation, Thomasville, Georgia; PNB, Pinebloom Plantation, Albany, Georgia; VAL, Valdosta, Georgia; TLT, Tall Timbers Research Station and Land Conservancy, Tallahassee, Florida; CMB, Camp Blanding, Florida; MRI, Merritt Island National Wildlife Refuge, Florida.
Figure 2Genotyping scheme for Mycobacterium leprae determined by using single-nucleotide polymorphisms (SNPs) and variable number tandem repeat (VNTR) polymorphisms, southeastern United States. Shading indicates the base that differentiates SNP type and subtype of M. leprae. The algorithm used for strain typing of M. leprae is based on specific SNP location and type and VNTR copy number at the various locations identified along the chromosome. After identification of the major SNP subtype, M. leprae is further discriminated by using allele numbers at 10 VNTR loci. INS, insertion; DEL, deletion.
Figure 3Minimum spanning tree constructed by using single-nucleotide polymorphism (SNP) and variable number tandem repeat (VNTR) polymorphism profiles for Mycobacterium leprae samples from patients and armadillos from the southeastern United States. Each circle represents a single strain genotype of M. leprae. Large circles indicate that >1 sample (number shown) had a common genotype. Values along lines indicate number of differences between allelic profiles. Human and armadillo samples of common SNP subtype 3I-2 are indicated by different colors. Only 2 genotypes were present in >1 sample, and both genotypes were present among armadillos and patients.
Serologic and molecular detection of Mycobacterium leprae infections among armadillos from various locations in the southeastern United States*
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| LID1 | PGL1 | LID1 or PGL1 | LID1 and PGL1 | RLEP locus | 1 site | 2 sites | ||||
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| 31 | 2 | 2 | 2 | 2 | 2 | 2 | 0 | 2 | 0 |
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| 8 | 1 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 |
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| 65 | 9 | 16 | 18 | 7 | 17 | 16 | 14 | 17 | 13 |
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| 38 | 5 | 2 | 7 | 0 | 5 | 5 | 2 | 5 | 2 |
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| 23 | 7 | 0 | 7 | 0 | 7 | 6 | 3 | 7 | 3 |
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| 117 | 11 | 13 | 20 | 4 | 19 | 19 | 19 | 19 | 19 |
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| 23 | 5 | 1 | 6 | 0 | 3 | 3 | 2 | 3 | 2 |
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| 340 | 24 | 31 | 45 | 10 | 42 | 41 | 36 | 42 | 36 |
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| 645 | 64 | 65 | 106 | 23 | 95 | 92 | 76 | 95 | 75 |
*LID, leprosy IDRI diagnostic 1 antigen; PGL, phenolic glycolipid 1 antigen; RLEP, mutlicopy repeat sequence; hsp, heat shock protein; CMB, Camp Blanding, FL; VLD: Valdosta, GA; MRI, Merritt Island National Wildlife Refuge, FL; CON, Conecuh National Forest, AL; DSO, DeSoto National Forest, MS; PNB, Pinebloom Plantation, Albany, GA; PBH, Pebble Hill Plantation, Thomasville GA; TLT, Tall Timbers Research Station and Land Conservancy, Tallahassee, FL.
Next-generation whole-genome sequencing of Mycobacterium leprae strain 3I-2-v15 derived from wild armadillos from the southeastern United States compared with that for armadillo-associated strain 3I-2-v1
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| 19.8 (88.72) | 7 | 9 | 4 | 20 | 37 |
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| 97.99 (98.36) | 1 | 9 | 4 | 14 | 37 |
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| 119.32 (99.00) | 0 | 9 | 4 | 13 | 37 |
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| 25.3 (92.08) | 6 | 9 | 4 | 19 | 37 |
*Average no. of consensus sequence reads obtained from the particular specimen covering the entire genome. †No. variants reported to be specific for single-nucleotide polymorphism (SNP) type 3I-2 that are present in all samples of the 3I-2-v1 genotype and that were found in some, but not all, samples of the 3I-2-v15 genotype. ‡Resequencing referenced the M. leprae TN standard genomic sequence, identified 13 variants present only in 3I-2-v1 (2 SNP, 2 insertion/deletions) or 3I-2-v15 (9 SNP), and differentiated the strains.