Literature DB >> 26581160

Increased Valency of Conserved-mosaic Vaccines Enhances the Breadth and Depth of Epitope Recognition.

Sultan Abdul-Jawad1, Beatrice Ondondo1, Andy van Hateren2, Andrew Gardner1, Tim Elliott2, Bette Korber3, Tomáš Hanke4.   

Abstract

The biggest roadblock in development of effective vaccines against human immunodeficiency virus type 1 (HIV-1) is the virus genetic diversity. For T-cell vaccine, this can be tackled by focusing the vaccine-elicited T-cells on the highly functionally conserved regions of HIV-1 proteins, mutations in which typically cause a replicative fitness loss, and by computing multivalent mosaic proteins, which maximize the coverage of potential 9-mer T-cell epitopes of the input viral sequences. Our first conserved region vaccines HIVconsv employed clade alternating consensus sequences and showed promise in the initial clinical trials in terms of magnitude and breadth of elicited CD8(+) T-cells. Here, monitoring T-cells restricted by HLA-A*02:01 in transgenic mice, we assessed whether or not the tHIVconsv design (HIVconsv with a tissue plasminogen activator leader sequence) benefits from combining with a complementing conserved mosaic immunogen tHIVcmo, and compared the bivalent immunization to that with trivalent conserved mosaic vaccines. A hierarchy of tHIVconsvtHIVconsv+tHIVcmo < tCmo1+tCmo2+tCmo3 vaccinations for induction of CD8(+) T-cell responses was observed in terms of recognition of tested peptide variants. Thus, our HLA-A*02:01-restricted epitope data concur with previously published mouse and macaque observations and suggest that even conserved region vaccines benefit from oligovalent mosaic design.

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Year:  2015        PMID: 26581160      PMCID: PMC4817818          DOI: 10.1038/mt.2015.210

Source DB:  PubMed          Journal:  Mol Ther        ISSN: 1525-0016            Impact factor:   11.454


  54 in total

1.  Cytotoxic T-cell activity antagonized by naturally occurring HIV-1 Gag variants.

Authors:  P Klenerman; S Rowland-Jones; S McAdam; J Edwards; S Daenke; D Lalloo; B Köppe; W Rosenberg; D Boyd; A Edwards
Journal:  Nature       Date:  1994-06-02       Impact factor: 49.962

2.  Evolution and transmission of stable CTL escape mutations in HIV infection.

Authors:  P J Goulder; C Brander; Y Tang; C Tremblay; R A Colbert; M M Addo; E S Rosenberg; T Nguyen; R Allen; A Trocha; M Altfeld; S He; M Bunce; R Funkhouser; S I Pelton; S K Burchett; K McIntosh; B T Korber; B D Walker
Journal:  Nature       Date:  2001-07-19       Impact factor: 49.962

3.  Covariation of mutations in the V3 loop of human immunodeficiency virus type 1 envelope protein: an information theoretic analysis.

Authors:  B T Korber; R M Farber; D H Wolpert; A S Lapedes
Journal:  Proc Natl Acad Sci U S A       Date:  1993-08-01       Impact factor: 11.205

4.  Immunodominance in virus-induced CD8(+) T-cell responses is dramatically modified by DNA immunization and is regulated by gamma interferon.

Authors:  Fernando Rodriguez; Stephanie Harkins; Mark K Slifka; J Lindsay Whitton
Journal:  J Virol       Date:  2002-05       Impact factor: 5.103

5.  Clustering patterns of cytotoxic T-lymphocyte epitopes in human immunodeficiency virus type 1 (HIV-1) proteins reveal imprints of immune evasion on HIV-1 global variation.

Authors:  Karina Yusim; Can Kesmir; Brian Gaschen; Marylyn M Addo; Marcus Altfeld; Søren Brunak; Alexandre Chigaev; Vincent Detours; Bette T Korber
Journal:  J Virol       Date:  2002-09       Impact factor: 5.103

6.  Temporal association of cellular immune responses with the initial control of viremia in primary human immunodeficiency virus type 1 syndrome.

Authors:  R A Koup; J T Safrit; Y Cao; C A Andrews; G McLeod; W Borkowsky; C Farthing; D D Ho
Journal:  J Virol       Date:  1994-07       Impact factor: 5.103

7.  HIV evolution: CTL escape mutation and reversion after transmission.

Authors:  A J Leslie; K J Pfafferott; P Chetty; R Draenert; M M Addo; M Feeney; Y Tang; E C Holmes; T Allen; J G Prado; M Altfeld; C Brander; C Dixon; D Ramduth; P Jeena; S A Thomas; A St John; T A Roach; B Kupfer; G Luzzi; A Edwards; G Taylor; H Lyall; G Tudor-Williams; V Novelli; J Martinez-Picado; P Kiepiela; B D Walker; P J R Goulder
Journal:  Nat Med       Date:  2004-02-08       Impact factor: 53.440

Review 8.  Diversity considerations in HIV-1 vaccine selection.

Authors:  Brian Gaschen; Jesse Taylor; Karina Yusim; Brian Foley; Feng Gao; Dorothy Lang; Vladimir Novitsky; Barton Haynes; Beatrice H Hahn; Tanmoy Bhattacharya; Bette Korber
Journal:  Science       Date:  2002-06-28       Impact factor: 47.728

9.  Characterization and selection of HIV-1 subtype C isolates for use in vaccine development.

Authors:  Carolyn Williamson; Lynn Morris; Maureen F Maughan; Li-Hua Ping; Sergey A Dryga; Robin Thomas; Elizabeth A Reap; Tonie Cilliers; Joanne van Harmelen; Alvaro Pascual; Gita Ramjee; Glenda Gray; Robert Johnston; Salim Abdool Karim; Ronald Swanstrom
Journal:  AIDS Res Hum Retroviruses       Date:  2003-02       Impact factor: 2.205

10.  Designing and testing broadly-protective filoviral vaccines optimized for cytotoxic T-lymphocyte epitope coverage.

Authors:  Paul W Fenimore; Majidat A Muhammad; William M Fischer; Brian T Foley; Russell R Bakken; James R Thurmond; Karina Yusim; Hyejin Yoon; Michael Parker; Mary Kate Hart; John M Dye; Bette Korber; Carla Kuiken
Journal:  PLoS One       Date:  2012-10-03       Impact factor: 3.240

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  24 in total

1.  Mosaic H5 Hemagglutinin Provides Broad Humoral and Cellular Immune Responses against Influenza Viruses.

Authors:  Attapon Kamlangdee; Brock Kingstad-Bakke; Jorge E Osorio
Journal:  J Virol       Date:  2016-07-11       Impact factor: 5.103

2.  Novel Conserved-region T-cell Mosaic Vaccine With High Global HIV-1 Coverage Is Recognized by Protective Responses in Untreated Infection.

Authors:  Beatrice Ondondo; Hayato Murakoshi; Genevieve Clutton; Sultan Abdul-Jawad; Edmund G-T Wee; Hiroyuki Gatanaga; Shinichi Oka; Andrew J McMichael; Masafumi Takiguchi; Bette Korber; Tomáš Hanke
Journal:  Mol Ther       Date:  2016-01-08       Impact factor: 11.454

3.  Graph-theoretical formulation of the generalized epitope-based vaccine design problem.

Authors:  Emilio Dorigatti; Benjamin Schubert
Journal:  PLoS Comput Biol       Date:  2020-10-23       Impact factor: 4.475

4.  Evaluation of a mosaic HIV-1 vaccine in a multicentre, randomised, double-blind, placebo-controlled, phase 1/2a clinical trial (APPROACH) and in rhesus monkeys (NHP 13-19).

Authors:  Dan H Barouch; Frank L Tomaka; Frank Wegmann; Daniel J Stieh; Galit Alter; Merlin L Robb; Nelson L Michael; Lauren Peter; Joseph P Nkolola; Erica N Borducchi; Abishek Chandrashekar; David Jetton; Kathryn E Stephenson; Wenjun Li; Bette Korber; Georgia D Tomaras; David C Montefiori; Glenda Gray; Nicole Frahm; M Juliana McElrath; Lindsey Baden; Jennifer Johnson; Julia Hutter; Edith Swann; Etienne Karita; Hannah Kibuuka; Juliet Mpendo; Nigel Garrett; Kathy Mngadi; Kundai Chinyenze; Frances Priddy; Erica Lazarus; Fatima Laher; Sorachai Nitayapan; Punnee Pitisuttithum; Stephan Bart; Thomas Campbell; Robert Feldman; Gregg Lucksinger; Caroline Borremans; Katleen Callewaert; Raphaele Roten; Jerald Sadoff; Lorenz Scheppler; Mo Weijtens; Karin Feddes-de Boer; Daniëlle van Manen; Jessica Vreugdenhil; Roland Zahn; Ludo Lavreys; Steven Nijs; Jeroen Tolboom; Jenny Hendriks; Zelda Euler; Maria G Pau; Hanneke Schuitemaker
Journal:  Lancet       Date:  2018-07-06       Impact factor: 79.321

Review 5.  HIV-Host Interactions: Implications for Vaccine Design.

Authors:  Barton F Haynes; George M Shaw; Bette Korber; Garnett Kelsoe; Joseph Sodroski; Beatrice H Hahn; Persephone Borrow; Andrew J McMichael
Journal:  Cell Host Microbe       Date:  2016-02-25       Impact factor: 21.023

Review 6.  So Pathogenic or So What?-A Brief Overview of SIV Pathogenesis with an Emphasis on Cure Research.

Authors:  Adam J Kleinman; Ivona Pandrea; Cristian Apetrei
Journal:  Viruses       Date:  2022-01-12       Impact factor: 5.048

Review 7.  Vaccines and Broadly Neutralizing Antibodies for HIV-1 Prevention.

Authors:  Kathryn E Stephenson; Kshitij Wagh; Bette Korber; Dan H Barouch
Journal:  Annu Rev Immunol       Date:  2020-04-26       Impact factor: 32.481

8.  Epigraph: A Vaccine Design Tool Applied to an HIV Therapeutic Vaccine and a Pan-Filovirus Vaccine.

Authors:  James Theiler; Hyejin Yoon; Karina Yusim; Louis J Picker; Klaus Fruh; Bette Korber
Journal:  Sci Rep       Date:  2016-10-05       Impact factor: 4.379

9.  HIV-1-neutralizing antibody induced by simian adenovirus- and poxvirus MVA-vectored BG505 native-like envelope trimers.

Authors:  Silvia Capucci; Edmund G Wee; Torben Schiffner; Celia C LaBranche; Nicola Borthwick; Albert Cupo; Jonathan Dodd; Hansi Dean; Quentin Sattentau; David Montefiori; Per J Klasse; Rogier W Sanders; John P Moore; Tomáš Hanke
Journal:  PLoS One       Date:  2017-08-09       Impact factor: 3.240

10.  Broad HIV-1 inhibition in vitro by vaccine-elicited CD8(+) T cells in African adults.

Authors:  Gaudensia Mutua; Bashir Farah; Robert Langat; Jackton Indangasi; Simon Ogola; Brian Onsembe; Jakub T Kopycinski; Peter Hayes; Nicola J Borthwick; Ambreen Ashraf; Len Dally; Burc Barin; Annika Tillander; Jill Gilmour; Jan De Bont; Alison Crook; Drew Hannaman; Josephine H Cox; Omu Anzala; Patricia E Fast; Marie Reilly; Kundai Chinyenze; Walter Jaoko; Tomáš Hanke; The Hiv-Core 004 Study Group
Journal:  Mol Ther Methods Clin Dev       Date:  2016-08-31       Impact factor: 6.698

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