Literature DB >> 26580186

Concerted Cyclization of Lanosterol C-Ring and D-Ring Under Human Oxidosqualene Cyclase Catalysis: An ab Initio QM/MM MD Study.

Nanhao Chen1, Jingwei Zhou1, Jiabo Li2, Jun Xu1, Ruibo Wu1.   

Abstract

Human oxidosqualene cyclase (OSC) is one key enzyme in the biosynthesis of cholesterol. It can catalyze the linear-chain 2,3-oxidosqualene to form lanosterol, the tetracyclic (6-6-6-5 members for A-B-C-D rings) cholesterol precursor. It also has been treated as a novel antihyperlipidemia target. In addition, the structural diversity of cyclic terpenes in plants originates from the cyclization of 2,3-oxidosqualene. The enzyme catalytic mechanism is considered to be one of the most complicated ones in nature, and there are a lot of controversies about the mechanism in the past half a century. Herein, state-of-the-art ab initio QM/MM MD simulations are employed to investigate the detailed cyclization mechanism of C-ring and D-ring formation. Our study reveals that the C and D rings are formed near-synchronously from a stable "6-6-5" ring intermediate. Interestingly, the transition state of this concerted reaction presents a "6-6-6" structure motif, while this unstable "6-6-6" structure in our simulations is thought to be a stable intermediate state in most previous hypothetical mechanisms. Furthermore, as the tailed side chain of 2,3-oxidosqualene shows a β conformation while it is α conformation in lanosterol, finally, it is observed that the rotatable "tail" chain prefers to transfer β conformation to α conformation at the "6-6-5" intermediate state.

Entities:  

Year:  2014        PMID: 26580186     DOI: 10.1021/ct400949b

Source DB:  PubMed          Journal:  J Chem Theory Comput        ISSN: 1549-9618            Impact factor:   6.006


  2 in total

1.  Mechanistically informed predictions of binding modes for carbocation intermediates of a sesquiterpene synthase reaction.

Authors:  T E O'Brien; S J Bertolani; D J Tantillo; J B Siegel
Journal:  Chem Sci       Date:  2016-03-21       Impact factor: 9.825

2.  Theoretical Study of Sesterfisherol Biosynthesis: Computational Prediction of Key Amino Acid Residue in Terpene Synthase.

Authors:  Hajime Sato; Koji Narita; Atsushi Minami; Mami Yamazaki; Chao Wang; Hironori Suemune; Shingo Nagano; Takeo Tomita; Hideaki Oikawa; Masanobu Uchiyama
Journal:  Sci Rep       Date:  2018-02-06       Impact factor: 4.379

  2 in total

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