Literature DB >> 26579763

Infrared and Raman Spectroscopy of Liquid Water through "First-Principles" Many-Body Molecular Dynamics.

Gregory R Medders1, Francesco Paesani1.   

Abstract

Vibrational spectroscopy is a powerful technique to probe the structure and dynamics of water. However, deriving an unambiguous molecular-level interpretation of the experimental spectral features remains a challenge due to the complexity of the underlying hydrogen-bonding network. In this contribution, we present an integrated theoretical and computational framework (named many-body molecular dynamics or MB-MD) that, by systematically removing uncertainties associated with existing approaches, enables a rigorous modeling of vibrational spectra of water from quantum dynamical simulations. Specifically, we extend approaches used to model the many-body expansion of interaction energies to develop many-body representations of the dipole moment and polarizability of water. The combination of these "first-principles" representations with centroid molecular dynamics simulations enables the simulation of infrared and Raman spectra of liquid water under ambient conditions that, without relying on any ad hoc parameters, are in good agreement with the corresponding experimental results. Importantly, since the many-body energy, dipole, and polarizability surfaces employed in the simulations are derived independently from accurate fits to correlated electronic structure data, MB-MD allows for a systematic analysis of the calculated spectra in terms of both electronic and dynamical contributions. The present analysis suggests that, while MB-MD correctly reproduces both the shifts and the shapes of the main spectroscopic features, an improved description of quantum dynamical effects possibly combined with a dissociable water potential may be necessary for a quantitative representation of the OH stretch band.

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Year:  2015        PMID: 26579763     DOI: 10.1021/ct501131j

Source DB:  PubMed          Journal:  J Chem Theory Comput        ISSN: 1549-9618            Impact factor:   6.006


  16 in total

1.  Perspective: Quantum mechanical methods in biochemistry and biophysics.

Authors:  Qiang Cui
Journal:  J Chem Phys       Date:  2016-10-14       Impact factor: 3.488

2.  Preordering of water is not needed for ice recognition by hyperactive antifreeze proteins.

Authors:  Arpa Hudait; Daniel R Moberg; Yuqing Qiu; Nathan Odendahl; Francesco Paesani; Valeria Molinero
Journal:  Proc Natl Acad Sci U S A       Date:  2018-07-09       Impact factor: 11.205

3.  Perturbation Approach for Computing Infrared Spectra of the Local Mode of Probe Molecules.

Authors:  Rui-Jie Xue; Adam Grofe; He Yin; Zexing Qu; Jiali Gao; Hui Li
Journal:  J Chem Theory Comput       Date:  2016-12-07       Impact factor: 6.006

4.  Coarse-Graining of Imaginary Time Feynman Path Integrals: Inclusion of Intramolecular Interactions and Bottom-up Force-Matching.

Authors:  Won Hee Ryu; Gregory A Voth
Journal:  J Phys Chem A       Date:  2022-08-25       Impact factor: 2.944

5.  The dielectric function profile across the water interface through surface-specific vibrational spectroscopy and simulations.

Authors:  Kuo-Yang Chiang; Takakazu Seki; Chun-Chieh Yu; Tatsuhiko Ohto; Johannes Hunger; Mischa Bonn; Yuki Nagata
Journal:  Proc Natl Acad Sci U S A       Date:  2022-08-29       Impact factor: 12.779

6.  Static and Dynamic Correlations in Water: Comparison of Classical Ab Initio Molecular Dynamics at Elevated Temperature with Path Integral Simulations at Ambient Temperature.

Authors:  Chenghan Li; Francesco Paesani; Gregory A Voth
Journal:  J Chem Theory Comput       Date:  2022-03-09       Impact factor: 6.578

7.  Implementation of Geometry-Dependent Charge Flux into the Polarizable AMOEBA+ Potential.

Authors:  Chengwen Liu; Jean-Philip Piquemal; Pengyu Ren
Journal:  J Phys Chem Lett       Date:  2019-12-30       Impact factor: 6.475

8.  A new one-site coarse-grained model for water: Bottom-up many-body projected water (BUMPer). I. General theory and model.

Authors:  Jaehyeok Jin; Yining Han; Alexander J Pak; Gregory A Voth
Journal:  J Chem Phys       Date:  2021-01-28       Impact factor: 3.488

9.  Notes on simulating two-dimensional Raman and terahertz-Raman signals with a full molecular dynamics simulation approach.

Authors:  Hironobu Ito; Ju-Yeon Jo; Yoshitaka Tanimura
Journal:  Struct Dyn       Date:  2015-10-06       Impact factor: 2.920

Review 10.  Modeling Molecular Interactions in Water: From Pairwise to Many-Body Potential Energy Functions.

Authors:  Gerardo Andrés Cisneros; Kjartan Thor Wikfeldt; Lars Ojamäe; Jibao Lu; Yao Xu; Hedieh Torabifard; Albert P Bartók; Gábor Csányi; Valeria Molinero; Francesco Paesani
Journal:  Chem Rev       Date:  2016-05-17       Impact factor: 60.622

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