Literature DB >> 26578153

Duck hepatitis A virus serotype 1 minigenome: a model for studying the viral 3'UTR effect on viral translation.

Ruiying Liang1,2, Chuanfeng Li1, Hongyan Jin3, Chunchun Meng1, Zongyan Chen1, Jie Zhu1, Qiuhong Miao1, Chan Ding1, Guangqing Liu4.   

Abstract

To date, the genetic replication and translation mechanisms as well as the pathogenesis of duck hepatitis A virus type 1 (DHAV-1) have not been adequately characterized due to the lack of a reliable and efficient cell culture system. Although the full-length infections clone system is the best platform to manipulate the virus, it is relatively difficult to assemble this system due to the lack of a suitable cell line. It has been proven that the minigenome system an efficient reverse genetics system for the study of RNA viruses. In some cases, it can be used to displace the infectious clone of RNA viruses. Here, we generated a minigenome for DHAV-1 with two luciferase reporter genes, firefly luciferase (Fluc) and Renilla luciferase (Rluc). The Rluc gene was used as a reference gene for the normalization of the Fluc gene expression in transfected cells, which provided a platform for studying the regulatory mechanisms of DHAV-1. Furthermore, to investigate the role of DHAV-3'UTR in the regulation of viral protein translation, deletions in the 3'UTR were introduced into the DHAV-1 minigenome. Luciferase activity, an indicator of virus translation, was then determined. These results showed that a minigenome system for DHAV-1 was successfully constructed for the first time and that the complete or partial deletion of the DHAV-3'UTR did not affect the expression level of the reporter gene, indicating that DHAV-1 translation may not be modulated by the viral genomic 3'UTR sequence.

Entities:  

Keywords:  3′UTR; Duck hepatitis A virus; Minigenome system

Mesh:

Substances:

Year:  2015        PMID: 26578153     DOI: 10.1007/s11262-015-1255-0

Source DB:  PubMed          Journal:  Virus Genes        ISSN: 0920-8569            Impact factor:   2.332


  23 in total

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Authors:  Rui-Ying Liang; Chuan-Feng Li; Chun-Chun Meng; Zong-Yan Chen; Guang-Qing Liu
Journal:  Bing Du Xue Bao       Date:  2014-07

2.  The effects of the conserved extreme 3' end sequence of hepatitis C virus (HCV) RNA on the in vitro stabilization and translation of the HCV RNA genome.

Authors:  J W Fang; R W Moyer
Journal:  J Hepatol       Date:  2000-10       Impact factor: 25.083

3.  RNA polymerase I-driven minigenome system for Ebola viruses.

Authors:  Allison Groseth; Heinz Feldmann; Steven Theriault; Gülsah Mehmetoglu; Ramon Flick
Journal:  J Virol       Date:  2005-04       Impact factor: 5.103

4.  Genetic analysis of sequences in the 3' nontranslated region of hepatitis C virus that are important for RNA replication.

Authors:  Peter Friebe; Ralf Bartenschlager
Journal:  J Virol       Date:  2002-06       Impact factor: 5.103

5.  Molecular analysis of duck hepatitis virus type 1 reveals a novel lineage close to the genus Parechovirus in the family Picornaviridae.

Authors:  Min-Chul Kim; Yong-Kuk Kwon; Seong-Joon Joh; A Michael Lindberg; Jun-Hun Kwon; Jae-Hong Kim; Sun-Joong Kim
Journal:  J Gen Virol       Date:  2006-11       Impact factor: 3.891

6.  Hepatitis C virus IRES efficiency is unaffected by the genomic RNA 3'NTR even in the presence of viral structural or non-structural proteins.

Authors:  Isabelle Imbert; Maria Dimitrova; François Kien; Marie Paule Kieny; Catherine Schuster
Journal:  J Gen Virol       Date:  2003-06       Impact factor: 3.891

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Authors:  Chun-yu Ding; Da-bing Zhang
Journal:  Bing Du Xue Bao       Date:  2007-07

8.  Classification of duck hepatitis virus into three genotypes based on molecular evolutionary analysis.

Authors:  Liyan Wang; Meng Pan; Yu Fu; Dabing Zhang
Journal:  Virus Genes       Date:  2008-04-24       Impact factor: 2.332

9.  The 3' untranslated region of picornavirus RNA: features required for efficient genome replication.

Authors:  J B Rohll; D H Moon; D J Evans; J W Almond
Journal:  J Virol       Date:  1995-12       Impact factor: 5.103

10.  The duck hepatitis virus 5'-UTR possesses HCV-like IRES activity that is independent of eIF4F complex and modulated by downstream coding sequences.

Authors:  Guangqing Liu; Emilio Yángüez; Zongyan Chen; Chuanfeng Li
Journal:  Virol J       Date:  2011-03-31       Impact factor: 4.099

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  2 in total

1.  Cleavage of poly(A)-binding protein by duck hepatitis A virus 3C protease.

Authors:  Di Sun; Mingshu Wang; Xingjian Wen; Anchun Cheng; Renyong Jia; Kunfeng Sun; Qiao Yang; Ying Wu; Dekang Zhu; Shun Chen; Mafeng Liu; Xinxin Zhao; Xiaoyue Chen
Journal:  Sci Rep       Date:  2017-11-24       Impact factor: 4.379

2.  The Functional Role of the 3' Untranslated Region and Poly(A) Tail of Duck Hepatitis A Virus Type 1 in Viral Replication and Regulation of IRES-Mediated Translation.

Authors:  Jun-Hao Chen; Rui-Hua Zhang; Shao-Li Lin; Peng-Fei Li; Jing-Jing Lan; Sha-Sha Song; Ji-Ming Gao; Yu Wang; Zhi-Jing Xie; Fu-Chang Li; Shi-Jin Jiang
Journal:  Front Microbiol       Date:  2018-09-25       Impact factor: 5.640

  2 in total

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