Literature DB >> 26576056

NMR Structure and Dynamics of the Resuscitation Promoting Factor RpfC Catalytic Domain.

Vincenzo Maione1, Alessia Ruggiero2, Luigi Russo3, Alfonso De Simone4, Paolo Vincenzo Pedone1,3, Gaetano Malgieri1, Rita Berisio2, Carla Isernia1,3.   

Abstract

Mycobacterium tuberculosis latent infection is maintained for years with no clinical symptoms and no adverse effects for the host. The mechanism through which dormant M. tuberculosis resuscitates and enters the cell cycle leading to tuberculosis is attracting much interest. The RPF family of proteins has been found to be responsible for bacteria resuscitation and normal proliferation. This family of proteins in M. tuberculosis is composed by five homologues (named RpfA-E) and understanding their conformational, structural and functional peculiarities is crucial to the design of therapeutic strategies.Therefore, we report the structural and dynamics characterization of the catalytic domain of RpfC from M. tubercolosis by combining Nuclear Magnetic Resonance, Circular Dichroism and Molecular Dynamics data. We also show how the formation of a disulfide bridge, highly conserved among the homologues, is likely to modulate the shape of the RpfC hydrophobic catalytic cleft. This might result in a protein function regulation via a "conformational editing" through a disulfide bond formation.

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Year:  2015        PMID: 26576056      PMCID: PMC4648573          DOI: 10.1371/journal.pone.0142807

Source DB:  PubMed          Journal:  PLoS One        ISSN: 1932-6203            Impact factor:   3.240


  44 in total

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Authors:  Viktor Hornak; Robert Abel; Asim Okur; Bentley Strockbine; Adrian Roitberg; Carlos Simmerling
Journal:  Proteins       Date:  2006-11-15

2.  Deletion of the Mycobacterium tuberculosis resuscitation-promoting factor Rv1009 gene results in delayed reactivation from chronic tuberculosis.

Authors:  JoAnn M Tufariello; Kaixia Mi; Jiayong Xu; Yukari C Manabe; Anup K Kesavan; Joshua Drumm; Kathryn Tanaka; William R Jacobs; John Chan
Journal:  Infect Immun       Date:  2006-05       Impact factor: 3.441

3.  4D prediction of protein (1)H chemical shifts.

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Journal:  J Biomol NMR       Date:  2009-10-30       Impact factor: 2.835

4.  A family of autocrine growth factors in Mycobacterium tuberculosis.

Authors:  Galina V Mukamolova; Obolbek A Turapov; Danielle I Young; Arseny S Kaprelyants; Douglas B Kell; Michael Young
Journal:  Mol Microbiol       Date:  2002-11       Impact factor: 3.501

5.  The program XEASY for computer-supported NMR spectral analysis of biological macromolecules.

Authors:  C Bartels; T H Xia; M Billeter; P Güntert; K Wüthrich
Journal:  J Biomol NMR       Date:  1995-07       Impact factor: 2.835

6.  The structure of a resuscitation-promoting factor domain from Mycobacterium tuberculosis shows homology to lysozymes.

Authors:  Martin Cohen-Gonsaud; Philippe Barthe; Claire Bagnéris; Brian Henderson; John Ward; Christian Roumestand; Nicholas H Keep
Journal:  Nat Struct Mol Biol       Date:  2005-02-20       Impact factor: 15.369

7.  On the origin of the positive band in the far-ultraviolet circular dichroic spectrum of fibronectin.

Authors:  M Y Khan; G Villanueva; S A Newman
Journal:  J Biol Chem       Date:  1989-02-05       Impact factor: 5.157

8.  Individual Mycobacterium tuberculosis resuscitation-promoting factor homologues are dispensable for growth in vitro and in vivo.

Authors:  JoAnn M Tufariello; William R Jacobs; John Chan
Journal:  Infect Immun       Date:  2004-01       Impact factor: 3.441

9.  Revisiting absorbance at 230nm as a protein unfolding probe.

Authors:  Pei-Fen Liu; Larisa V Avramova; Chiwook Park
Journal:  Anal Biochem       Date:  2009-03-24       Impact factor: 3.365

Review 10.  Resuscitation-promoting factors as lytic enzymes for bacterial growth and signaling.

Authors:  Bavesh Davandra Kana; Valerie Mizrahi
Journal:  FEMS Immunol Med Microbiol       Date:  2009-09-04
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  7 in total

Review 1.  A structural overview of mycobacterial adhesins: Key biomarkers for diagnostics and therapeutics.

Authors:  Flavia Squeglia; Alessia Ruggiero; Alfonso De Simone; Rita Berisio
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2.  Structure and dynamics of the multi-domain resuscitation promoting factor RpfB from Mycobacterium tuberculosis.

Authors:  Alessia Ruggiero; Flavia Squeglia; Maria Romano; Luigi Vitagliano; Alfonso De Simone; Rita Berisio
Journal:  J Biomol Struct Dyn       Date:  2016-07-15

3.  Sub-minimum inhibitory concentration of rifampin: a potential risk factor for resuscitation of Mycobacterium tuberculosis.

Authors:  Shahin Pourazar Dizaji; Alireza Taala; Morteza Masoumi; Nayereh Ebrahimzadeh; Abolfazl Fateh; Seyed Davar Siadat; Farzam Vaziri
Journal:  Antimicrob Resist Infect Control       Date:  2017-11-14       Impact factor: 4.887

4.  Small RNA F6 Provides Mycobacterium smegmatis Entry into Dormancy.

Authors:  Artem Grigorov; Oksana Bychenko; Elena G Salina; Yulia Skvortsova; Arina Mazurova; Timofey Skvortsov; Arseny Kaprelyants; Tatyana Azhikina
Journal:  Int J Mol Sci       Date:  2021-10-26       Impact factor: 5.923

5.  Structure based design of effective HtpG-derived vaccine antigens against M. tuberculosis.

Authors:  Alessia Ruggiero; Han-Gyu Choi; Giovanni Barra; Flavia Squeglia; Young Woo Back; Hwa-Jung Kim; Rita Berisio
Journal:  Front Mol Biosci       Date:  2022-08-11

6.  Characterising resuscitation promoting factor fluorescent-fusions in mycobacteria.

Authors:  Iria Uhía; Nitya Krishnan; Brian D Robertson
Journal:  BMC Microbiol       Date:  2018-04-12       Impact factor: 3.605

Review 7.  Solution NMR Studies of Mycobacterium tuberculosis Proteins for Antibiotic Target Discovery.

Authors:  Do-Hee Kim; Sung-Min Kang; Bong-Jin Lee
Journal:  Molecules       Date:  2017-08-31       Impact factor: 4.411

  7 in total

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