Literature DB >> 26575939

Specific Ion Binding at Phospholipid Membrane Surfaces.

Jing Yang1, Carles Calero2, Massimiliano Bonomi3, Jordi Martí1.   

Abstract

Metal cations are ubiquitous components in biological environments and play an important role in regulating cellular functions and membrane properties. By applying metadynamics simulations, we have performed systematic free energy calculations of Na(+), K(+), Ca(2+), and Mg(2+) bound to phospholipid membrane surfaces for the first time. The free energy landscapes unveil specific binding behaviors of metal cations on phospholipid membranes. Na(+) and K(+) are more likely to stay in the aqueous solution and can bind easily to a few lipid oxygens by overcoming low free energy barriers. Ca(2+) is most stable when it is bound to four lipid oxygens of the membrane rather than being hydrated in the aqueous solution. Mg(2+) is tightly hydrated, and it shows hardly any loss of a hydration water or binding directly to the membrane. When bound to the membrane, the cations' most favorable total coordination numbers with water and lipid oxygens are the same as their corresponding hydration numbers in aqueous solution, indicating a competition between ion binding to water and lipids. The binding specificity of metal cations on membranes is highly correlated with the hydration free energy and the size of the hydration shell.

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Year:  2015        PMID: 26575939     DOI: 10.1021/acs.jctc.5b00540

Source DB:  PubMed          Journal:  J Chem Theory Comput        ISSN: 1549-9618            Impact factor:   6.006


  5 in total

1.  Calcium-Induced Lipid Nanocluster Structures: Sculpturing of the Plasma Membrane.

Authors:  Michael J Hallock; Alexander I Greenwood; Yan Wang; James H Morrissey; Emad Tajkhorshid; Chad M Rienstra; Taras V Pogorelov
Journal:  Biochemistry       Date:  2018-12-04       Impact factor: 3.162

2.  Binding and dynamics of melatonin at the interface of phosphatidylcholine-cholesterol membranes.

Authors:  Huixia Lu; Jordi Martí
Journal:  PLoS One       Date:  2019-11-07       Impact factor: 3.240

3.  Cellular absorption of small molecules: free energy landscapes of melatonin binding at phospholipid membranes.

Authors:  Huixia Lu; Jordi Marti
Journal:  Sci Rep       Date:  2020-06-08       Impact factor: 4.379

4.  Membrane-Ion Interactions.

Authors:  Ran Friedman
Journal:  J Membr Biol       Date:  2018-01-12       Impact factor: 1.843

5.  An Integrated Mass Spectrometry and Molecular Dynamics Simulations Approach Reveals the Spatial Organization Impact of Metal-Binding Sites on the Stability of Metal-Depleted Metallothionein-2 Species.

Authors:  Manuel David Peris-Díaz; Roman Guran; Carmen Domene; Vivian de Los Rios; Ondrej Zitka; Vojtech Adam; Artur Krężel
Journal:  J Am Chem Soc       Date:  2021-09-03       Impact factor: 15.419

  5 in total

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