Literature DB >> 26575759

Transferable Atomic Multipole Machine Learning Models for Small Organic Molecules.

Tristan Bereau1, Denis Andrienko1, O Anatole von Lilienfeld2,3.   

Abstract

Accurate representation of the molecular electrostatic potential, which is often expanded in distributed multipole moments, is crucial for an efficient evaluation of intermolecular interactions. Here we introduce a machine learning model for multipole coefficients of atom types H, C, O, N, S, F, and Cl in any molecular conformation. The model is trained on quantum-chemical results for atoms in varying chemical environments drawn from thousands of organic molecules. Multipoles in systems with neutral, cationic, and anionic molecular charge states are treated with individual models. The models' predictive accuracy and applicability are illustrated by evaluating intermolecular interaction energies of nearly 1,000 dimers and the cohesive energy of the benzene crystal.

Entities:  

Year:  2015        PMID: 26575759     DOI: 10.1021/acs.jctc.5b00301

Source DB:  PubMed          Journal:  J Chem Theory Comput        ISSN: 1549-9618            Impact factor:   6.006


  14 in total

Review 1.  Molecular Dynamics Simulations of Membrane Permeability.

Authors:  Richard M Venable; Andreas Krämer; Richard W Pastor
Journal:  Chem Rev       Date:  2019-02-12       Impact factor: 60.622

2.  Accurate molecular polarizabilities with coupled cluster theory and machine learning.

Authors:  David M Wilkins; Andrea Grisafi; Yang Yang; Ka Un Lao; Robert A DiStasio; Michele Ceriotti
Journal:  Proc Natl Acad Sci U S A       Date:  2019-02-07       Impact factor: 11.205

3.  Gaussian Process Regression for Materials and Molecules.

Authors:  Volker L Deringer; Albert P Bartók; Noam Bernstein; David M Wilkins; Michele Ceriotti; Gábor Csányi
Journal:  Chem Rev       Date:  2021-08-16       Impact factor: 60.622

Review 4.  Ab Initio Machine Learning in Chemical Compound Space.

Authors:  Bing Huang; O Anatole von Lilienfeld
Journal:  Chem Rev       Date:  2021-08-13       Impact factor: 60.622

5.  Machine learning bandgaps of double perovskites.

Authors:  G Pilania; A Mannodi-Kanakkithodi; B P Uberuaga; R Ramprasad; J E Gubernatis; T Lookman
Journal:  Sci Rep       Date:  2016-01-19       Impact factor: 4.379

6.  Incorporation of local structure into kriging models for the prediction of atomistic properties in the water decamer.

Authors:  Stuart J Davie; Nicodemo Di Pasquale; Paul L A Popelier
Journal:  J Comput Chem       Date:  2016-08-18       Impact factor: 3.376

7.  Representation of molecular structures with persistent homology for machine learning applications in chemistry.

Authors:  Jacob Townsend; Cassie Putman Micucci; John H Hymel; Vasileios Maroulas; Konstantinos D Vogiatzis
Journal:  Nat Commun       Date:  2020-06-26       Impact factor: 14.919

8.  Machine learning meets volcano plots: computational discovery of cross-coupling catalysts.

Authors:  Benjamin Meyer; Boodsarin Sawatlon; Stefan Heinen; O Anatole von Lilienfeld; Clémence Corminboeuf
Journal:  Chem Sci       Date:  2018-07-13       Impact factor: 9.825

9.  Combining Machine Learning and Computational Chemistry for Predictive Insights Into Chemical Systems.

Authors:  John A Keith; Valentin Vassilev-Galindo; Bingqing Cheng; Stefan Chmiela; Michael Gastegger; Klaus-Robert Müller; Alexandre Tkatchenko
Journal:  Chem Rev       Date:  2021-07-07       Impact factor: 60.622

10.  Kernel-Based Machine Learning for Efficient Simulations of Molecular Liquids.

Authors:  Christoph Scherer; René Scheid; Denis Andrienko; Tristan Bereau
Journal:  J Chem Theory Comput       Date:  2020-04-24       Impact factor: 6.006

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