Literature DB >> 26575603

Clinico-pathological nomogram for predicting BRAF mutational status of metastatic colorectal cancer.

Fotios Loupakis1, Roberto Moretto1, Giuseppe Aprile2, Marta Muntoni1, Chiara Cremolini1, Donatella Iacono2, Mariaelena Casagrande2, Laura Ferrari2, Lisa Salvatore1, Marta Schirripa1, Daniele Rossini1, Giovanna De Maglio3, Gianpiero Fasola2, Lorenzo Calvetti4, Sara Pilotto4, Luisa Carbognin4, Gabriella Fontanini5, Giampaolo Tortora4, Alfredo Falcone1, Isabella Sperduti6, Emilio Bria4.   

Abstract

BACKGROUND: In metastatic colorectal cancer (mCRC), BRAFV600E mutation has been variously associated to specific clinico-pathological features.
METHODS: Two large retrospective series of mCRC patients from two Italian Institutions were used as training-set (TS) and validation-set (VS) for developing a nomogram predictive of BRAFV600E status. The model was internally and externally validated.
RESULTS: In the TS, data from 596 mCRC patients were gathered (RAS wild-type (wt) 281 (47.1%); BRAFV600E mutated 54 (9.1%)); RAS and BRAFV600E mutations were mutually exclusive. In the RAS-wt population, right-sided primary (odds ratio (OR): 7.80, 95% confidence interval (CI) 3.05-19.92), female gender (OR: 2.90, 95% CI 1.14-7.37) and mucinous histology (OR: 4.95, 95% CI 1.90-12.90) were independent predictors of BRAFV600E mutation, with high replication at internal validation (100%, 93% and 98%, respectively). A predictive nomogram was calculated: patients with the highest score (right-sided primary, female and mucinous) had a 81% chance to bear a BRAFV600E-mutant tumour; accuracy measures: AUC=0.812, SE:0.034, sensitivity:81.2%; specificity:72.1%. In the VS (508 pts, RAS wt: 262 (51.6%), BRAFV600E mutated: 49 (9.6%)), right-sided primary, female gender and mucinous histology were confirmed as independent predictors of BRAFV600E mutation with high accuracy.
CONCLUSIONS: Three simple and easy-to-collect characteristics define a useful nomogram for predicting BRAF status in mCRC with high specificity and sensitivity.

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Year:  2015        PMID: 26575603      PMCID: PMC4716533          DOI: 10.1038/bjc.2015.399

Source DB:  PubMed          Journal:  Br J Cancer        ISSN: 0007-0920            Impact factor:   7.640


In the last years, significant improvements in the treatment of metastatic colorectal cancer (mCRC) progressively increased the survival expectancy of the overall patients' population to over 2 years (Heinemann ; Lenz ; Loupakis ). A major contribution to these achievements was given by the introduction of RAS testing and the opportunity of treating wild-type (wt) patients with anti-epidermal growth factor receptor (EGFR) monoclonal antibodies (Atreya ). Although RAS status ascertainment is recommended by all major guidelines (Van Cutsem ; Clinical Practice Guidelines in Oncology (NCCN Guidelines), 2015), the predictive role towards anti-EGFRs of V600E activating mutation of BRAF is still debated (Di Nicolantonio ; Laurent-Puig ; Loupakis ; Souglakos ; De Roock ) To this extent, studies have not been conclusive maybe due to the low incidence of BRAFV600E mutation (<10% of mCRC; Davies ) and to the intrinsic limitations of retrospective subgroup analyses. Nevertheless, all the published series recognised that BRAFV600E mutation is a strong negative prognostic determinant in mCRC and BRAF-mutated metastatic patients have an extremely poor life-expectancy of around 12 months (Richman ; Souglakos ; Saridaki ; Tie ; Tran ; Yokota ; Saridaki ; Yaeger ). BRAF-mutated CRCs constitute a distinct subgroup with specific characteristics as underlined by their peculiar gene expression signature (Popovici ). The presence of a BRAF mutation has also been associated to specific clinico-pathological features (Samowitz ; Roth ; Tie ; Tran ; Yokota ; Clancy ; Saridaki ; Gonsalves ; Yaeger ). In some published series, BRAF mutation occurred more frequently in older patients and in females, and showed a higher rate of nodal and peritoneal metastases and a lower rate of lung involvement. BRAF-mutant CRCs were also more frequently right-sided, poorly differentiated, mucinous, microsatellite instable and T4-staged. In addition, patients bearing a BRAF-mutant tumour often had a poor performance status (PS) and multiple metastatic sites at diagnosis. However, the association between these features and BRAF mutation was only preliminarily described and up today, no clear and definitive comprehensive data are available, especially in terms of multivariate modelling. Moving from such considerations, we tested the specific contribution of each clinico-pathological feature for predicting BRAF mutational status in RAS-wt mCRC in a large training-set (TS) population. On those basis, we built a nomogram to predict the likelihood of BRAF mutation occurrence and validated it in a confirmatory external data set (Iasonos ).

Materials and methods

A specific database including the variables previously associated to the presence of BRAF mutation in CRC patients was built (Samowitz ; Roth ; Tie ; Tran ; Yokota ; Clancy ; Saridaki ; Gonsalves ; Yaeger ). The following characteristics were selected: age, ECOG-PS, time to metastatic presentation (i.e. synchronous vs metachronous), primary tumour site (i.e. right-sided, from caecum up to transverse colon included vs left-sided, from splenic flexure to rectum), resection of the primary tumour, mucinous histology (as indicated in pathological report), number of metastatic sites, peritoneal, lung, distant lymph nodes as metastatic sites, tumour grading, RAS and BRAF mutational status. The analysis was conducted as follows: (1) to determine (and confirm) the independent prognostic role for survival of BRAF mutation in our series of mCRC patients; (2) to identity the clinico-pathological predictive factors of the presence of BRAF mutation (predictive nomogram) in RAS-wt patients; (3) to measure the predictive accuracy of the generated nomogram; (4) to internally and externally validate the predictive nomogram. Thus, a step-by-step protocol was followed according to the methodological approach for building a nomogram according to Iasonos , with respect to the Reporting Recommendations for Tumor Marker Prognostic Studies (REMARK) criteria for the conduction of a retrospective study in the context of an unselected population (Simon ).

Patients' population

Consecutive mCRC patients with available clinical and pathological data (including RAS, BRAF mutational status) referred to the Unit of Oncology, Azienda Ospedaliero-Universitaria Pisana (Pisa, Italy) from February 2000 to October 2014, were retrospectively gathered (TS). Using the same database, data of patients with overlapping entry criteria, referred to the Department of Oncology, Azienda Ospedaliero-Universitaria Santa Maria della Misericordia (Udine, Italy) in the same time frame were gathered for the validation set (VS).

End point

The aim was to generate a predictive nomogram according to clinical and pathological factors for the identification of RAS-wt patients more likely to carry the BRAF mutation.

Mutational analyses

DNA was extracted from a single formalin-fixed-paraffin-embedded block. Haematoxylin-eosin slides were revised by expert pathologists who macrodissected proper representative areas, to obtain an amount of neoplastic cells of at least 50%. Genomic DNA was extracted using the QIAamp DNA Mini Kit (Qiagen, Hilden, Germany) with overnight proteinase K digestion and DNA concentration was determined by NanoDrop 2000c spectrophotometer (Nanodrop Technologies Inc., Wilmingon, DE, USA). KRAS (exons 2, 3 and 4), NRAS (exons 2, 3 and 4) and BRAFV600E mutational status was tested by means of Pyrosequencing on the PyroMarkQ96 ID instrument (Qiagen) with commercially available kits (Diatech Pharmacogenetics, Italy). Sensitivity (detectable percentage of mutant alleles) of the Pyrosequencing technique is around 5%.

Statistics

Descriptive statistics was used to summarise pertinent study information. Follow-up was analysed and reported according to Shuster (1991). The correlation between variables was analysed according to χ2. A multivariate Cox proportional hazard model was developed using stepwise regression (forward selection, enter/remove limits P=0.10 and P=0.15) to identify independent predictors of the presence of BRAF mutation; the odds ratio (OR) and the 95% confidence intervals (95% CI) were estimated for each variable. The assessment of interactions between significant investigation variables was taken into account when developing the multivariate model. Overall survival (OS) was calculated by the Kaplan–Meier product limit method from the date of diagnosis of metastatic disease until death due to cancer or death for any cause. The hazard ratio (HR) and 95% CI were estimated for each variable using the Cox multivariate model. The log-rank test was used to assess differences between subgroups. Significance was defined at the P<0.05 level. The SPSS (21.0), and MedCalc (14.12.0) licensed statistical programs were used for all analyses.

Internal validation

To address the over-fitting of multivariate model and to validate the results, a cross-validation technique that evaluates the replication stability of the Cox multivariate model in predicting the presence of BRAF mutation was investigated, using a resampling procedure considering those variables independent at the multivariate analysis (Iasonos ). This technique generates a number of simulation data sets (at least 100, each ∼80% of the original size), by randomly selecting patients from the original sample, to establish the consistency of the model across less-powered patient samples (Iasonos ).

Predictive score assessment

The log-ORs obtained from the Cox model were used to derive weighting factors of a predictive index, aimed at identifying differential probability of the presence of BRAF mutation. Coefficients estimates were ‘normalised' dividing by the smallest one and rounding the resulting ratios to the nearest integer value.

External validation

The predictive accuracy of the derived nomogram predictive of BRAF mutation was evaluated in the context of the VS. The sample size of the VS was calculated based on the predictive performance of the model estimated in the TS, to have a similar predictive performance between the two populations with a null hypothesis of 0.65, a power of 95% and an alpha-error of 5%. To assess the prognostic value of BRAF mutation, a multivariate model for OS was derived in the VS as well. A χ2 comparison between the predictive performances at the ROC analyses of the nomogram in the TS and in the VS was thereafter carried out.

Results

Data for overall 1104 advanced CRC patients were gathered (TS: 596, VS: 508 patients, respectively). Patients' characteristics are reported in Table 1. Overall, the two populations were similar, although the VS cohort included more patients with ECOG-PS⩾2, on site primary tumour, higher histological grade and number of metastatic sites. Median age was 65 (range 25–92) and 67 years (range 32–85) in the TS and VS, respectively. Median follow-up was 24 (range 0–163) and 20 months (range 1–165) in the TS and VS, respectively.
Table 1

Patients' characteristics in the TS and VS (overall population, N=1104)

 TS N (%)VS N (%)P-value
Number of patients596 (100)508 (100)
Gender
Male359 (60.2)318 (62.6)0.46
Female237 (39.8)190 (37.4) 
Age (years)
<65287 (48.2)224 (44.1)0.20
⩾65309 (51.8)284 (55.9) 
ECOG-PS
0–1468 (78.5)433 (85.2)<0.0001
⩾210 (1.7)75 (14.8) 
Missing118 (19.8)0 (0) 
Driver mutation
Wt227 (38.1)213 (41.8)0.96
BRAF mutant (V600E)54 (9.1)49 (9.6) 
RAS mutant315 (52.8)246 (48.6) 
Number of metastatic sites
1378 (63.4)216 (42.5)<0.0001
>1218 (36.6)292 (57.5) 
Peritoneal metastases
Yes130 (21.8)107 (21.1)0.82
No466 (78.2)401 (78.9) 
Lung metastases
Yes147 (24.7)152 (29.9)0.06
No449 (75.3)356 (70.1) 
Synchronous metastases
Yes412 (69.1)367 (72.2)0.29
No184 (30.9)141 (27.8) 
Distant lymph-node metastases
Yes117 (19.6)110 (21.7)0.45
No479 (80.4)398 (78.3) 
Mucinous histology
Yes110 (18.5)76 (15.0)<0.0001
No395 (66.3)416 (81.9) 
Missing91 (15.3)16 (3.1) 
Primary tumour site
Right202 (33.9)162 (31.9)0.52
Left394 (66.1)346 (68.1) 
Primary tumour resected
Yes466 (78.2)344 (67.8)<0.0001
No130 (21.8)164 (32.2) 
Tumour grading
G1–2248 (41.6)143 (28.1)<0.0001
G3–4195 (32.7)221 (43.5) 
Missing153 (25.7)144 (28.3) 

Abbreviations: N=number; PS=performance status; TS=training set; VS=validation set; wt=wild type.

%: rate; P-value: χ2 test.

In the TS, data from 596 advanced CRC patients were gathered (RAS wt: 281 (47.1%); BRAF mutant: 54 (9.1%)). BRAF mutation was more frequent in female (13.1% vs 6.4%, P=0.005), right-sided primary (16.3% vs 8.0%, P<0.0001), mucinous tumours (19.1% vs 6.8%, P<0.0001), poorly differentiated tumours (16.4% vs 4.7%, P<0.0001), patients with peritoneal metastases (14.6% vs 7.5%, P=0.01) and distant lymph-node metastases (15.4% vs 7.5%, P=0.008; Supplementary Table 1). In the overall sample, age ⩾65-years-old, ECOG-PS⩾2, unresected primary tumour, multiple metastatic sites and BRAF mutation were independent prognostic factors for poorer OS with a trend towards significance for mucinous histology (Table 2). BRAF mutation had the higher prognostic power at the multivariate analysis (HR: 2.98, 95% CI 1.96–4.52, P<0.0001). Thus, the identification of clinical and pathological predictors of the presence of BRAF mutation in the context of RAS-wt patients was justified.
Table 2

Uni- and multivariate analyses for OS

 TS (N=596)
VS (N=508)
 Univariate analysis
Multivariate analysis
Univariate analysis
Multivariate analysis
 HR (95% CI)P-valueHR (95% CI)P-valueHR (95% CI)P-valueHR (95% CI)P-value
Gender
F vs M1.14 (0.92–1.42)0.2221.17 (0.95–1.46)0.15
Age (cut-off: 65 years)
⩾65 vs <651.67 (1.35–2.07)0.00011.86 (1.38–2.49)<0.00011.21 (0.98–1.49)0.08
ECOG-PS
⩾2 vs <22.12 (1.70–2.63)0.00011.54 (1.14–2.07)0.0041.11 (0.83–1.47)0.49
Synchronous metastases
yes vs no1.31 (1.03–1.66)0.0261.05 (0.85–1.30)0.66
Primary site
right vs left1.52 (1.22–1.88)0.00011.48 (1.18–1.86)0.0011.33 (1.05–1.69)0.02
Primary resected
no vs yes1.97 (1.53–2.53)0.00012.27 (1.52–3.39)<0.00011.11 (0.95–1.38)0.23
Mucinous histology
yes vs no1.38 (1.05–1.82)0.0181.43 (0.97–2.08)0.0651.26 (0.97–1.63)0.09
Number of metastatic sites
>1 vs 12.08 (1.67–2.59)0.00011.83 (1.38–2.43)<0.00011.94 (1.56–2.42)<0.00011.76 (1.38–2.25)<0.0001
Peritoneal metastases
yes vs no1.69 (1.31–2.18)0.00011.37 (1.06–1.76)0.01
Lung metastases
yes vs no1.05 (0.82–1.35)0.6460.99 (0.74–1.21)0.53
Distant lymph-node metastases
yes vs no1.54 (1.18–2.02)0.0021.92 (1.50–2.47)<0.00011.31 (0.99–1.74)0.06
Tumour grading
3–4 vs 1–22.34 (1.83–3.01)0.00011.23 (0.98–1.56)0.08
RAS
mut vs wt1.20 (0.97–1.49)0.0881.01 (0.82–1.25)0.91
BRAF
mut vs wt2.56 (1.84–3.56)0.00012.98 (1.96–4.52)<0.00012.72 (1.92–3.85)<0.00012.33 (1.61–3.35)<0.0001

Abbreviations: CI=confidence intervals; HR=Hazard Ratio; N=number; OS=Overall Survival; PS=performance status; TS=training set; VS=validation set; wt=wild type.

Patients' characteristics of the RAS0-wt population for the TS are reported in Supplementary Table 2. Female gender (OR: 2.90, 95% CI 1.14–7.37, P=0.025), right-sided primary site (OR: 7.80, 95% CI 3.05–19.92, P<0.0001) and mucinous histology (OR: 4.95, 95% CI 1.90–12.90, P<0.0001), resulted to be significant independent predictors of the presence of BRAF mutation in the TS (Table 3). These factors replicated at the internal cross-validation with a high rate, as follows: gender (93%), primary site (100%) and histology (98%). Figure 1 shows the probability of harbouring BRAF mutation according to the scoring index assigned to each patient combining the three independent variables. At the ROC analysis, the predictive accuracy of such nomogram was high (AUC: 0.812, standard error: 0.034), with a sensitivity of 81.2% and a specificity of 72.1% (Figure 2, panel A).
Table 3

Uni- and multivariate analyses for the presence of BRAF mutation in the population of RAS-wt patients

 TS (N=281)
VS (N=262)
 Univariate analysis
Multivariate analysis
Univariate analysis
Multivariate analysis
 OR (95% CI)P-valueOR (95% CI)P-valueOR (95% CI)P-valueOR (95% CI)P-value
Gender
F vs M2.78 (1.51–5.11)0.0012.90 (1.14–7.37)0.0252.31 (1.23–4.33)0.0091.92 (0.92–3.97)0.08
Age (cut-off: 65 years)
⩾65 vs <651.03 (1.00–1.06)0.0300.111.42 (0.76–2.68)0.27
ECOG-PS
⩾2 vs <22.09 (1.02–4.28)0.0440.871.30 (0.54–3.12)0.55
Synchronous metastases
yes vs no1.17 (0.63–2.19)0.6061.34 (0.72–2.50)0.35-
Primary site
right vs left7.12 (3.74–13.56)0.00017.80 (3.05–19.92)<0.000111.14 (5.50–22.56)<0.00018.68 (4.18–18.02)<0.0001
Primary resected
no vs yes1.43 (0.68–3.02)0.3391.29 (0.78–2.86)0.229-
Mucinous histology
yes vs no4.69 (2.33–9.46)0.00014.95 (1.90–12.90)<0.00014.61 (2.34–9.07)<0.00013.23 (1.49–7.02)0.003
Number of metastatic site
>1 vs 11.21 (0.68–2.14)0.5061.92 (1.03–3.60)0.040.34
Peritoneal metastases
yes vs no2.19 (1.15–4.19)0.0170.172.53 (1.27–5.02)0.010.15
Lung metastases
yes vs no1.22 (0.59–2.51)0.5861.12 (0.65–1.91)0.69
Distant lymp-node metastases
yes vs no2.02 (1.05–3.88)0.0090.643.30 (1.72–6.33)<0.00010.19
Tumour grading
3–4 vs 1–24.54 (2.18–9.48)0.00010.461.63 (0.85–3.13)0.14

Abbreviations: CI=confidence intervals; N=number; OR=odds ratio; PS=performance status; TS=training set; VS=validation set; wt=wild type.

Figure 1

Clinico-pathological nomogram for predicting A predictive score is assigned to each variable and the sum of scores is converted to the probability of BRAF mutation occurrence.

Figure 2

ROC curves in TS (panel Abbreviations: AUC=area under the curve; SE=standard error.

Patients' characteristics of the VS are reported in Table 1. In the VS, data from 508 mCRC patients were gathered (RAS wt: 262 (51.6%); BRAF mutant: 49 (9.6%)). Patients' characteristics of the RAS-wt population for the VS are reported in Supplementary Table 2. Right-sided primary site (OR: 8.68, 95% CI 4.18–18.02, P<0.0001) and mucinous histology (OR: 3.23, 95% CI 1.49–7.02, P=0.003) were confirmed as independent predictors of BRAF mutation in the VS, with a trend towards significance for female gender (OR: 1.92, 95% CI 0.92–3.97, P=0.081; Table 3). The predictive nomogram derived in the TS was then applied to the VS; at the ROC analysis, the predictive accuracy was high (AUC: 0.811, standard error: 0.041), with a sensitivity of 73.5% and a specificity of 80.3% (Figure 2, panel B). No significant difference between the predictive performance of the model in both patients' cohorts was found (P=1.0). The Kaplan–Meier survival curves of patients in the TS and VS according to RAS and BRAF are shown in Figure 3. As expected, BRAF-mutant mCRC patients had a worse prognosis compared with RAS mutant, and RAS and BRAF-wt patients with an OS rate at 3 years of 19.8%, 37.3% and 45.5%, respectively (P<0.0001).
Figure 3

Kaplan–Meier curves of the probability of OS in A full colour version of this figure is available at the British Journal of Cancer journal online.

Discussion

BRAFV600E mutation occurs in 8–10% of mCRC and is associated with an extremely poor prognosis (Richman ; Souglakos ; Saridaki ; Tie ; Tran ; Yokota ; Saridaki ; Yaeger ). Despite this, the need of a routine assessment of BRAF mutational status for clinical practice is a matter of debate, because of the limited therapeutic implications outside of clinical trials (Van Cutsem ; Clinical Practice Guidelines in Oncology (NCCN Guidelines), 2015). Conversely, the analysis of RAS mutational status is essential for defining resistance to anti-EGFR monoclonal antibodies (Atreya ). Among RAS-wt patients the incidence of BRAF mutation is relatively higher (around 20%), because of the mutual exclusivity between RAS and BRAF mutations (Peeters ). Recently, many retrospective series preliminary described some clinical features specifically associated with BRAF mutation (Samowitz ; Roth ; Tie ; Tran ; Yokota ; Clancy ; Saridaki ; Gonsalves ; Yaeger ). Nevertheless, these studies were exploratory and included different stages (i.e. from I to IV), different settings, (i.e. first vs later lines of treatment), had an incomplete molecular assessment (in most of the cases only KRAS exon 2 was tested) and lacked of VSs. Hence, oncologists need to clarify and to properly measure the association between BRAFV600E mutational status and specific patients' and disease's characteristics in the context of the RAS-wt subgroup. The data reported herein female sex, age ⩾65 years, worse ECOG-PS, right-sided primary tumour, mucinous histology, presence of nodal and peritoneal metastases and higher tumour grading, were associated to BRAFV600E mutation in the TS and these findings are consistent with most previous studies (Samowitz ; Roth ; Tie ; Tran ; Yokota ; Clancy ; Saridaki ; Gonsalves ; Yaeger ). At the multivariate analysis, only female gender, right-sided primary and mucinous histology retained their significance as predictors of BRAFV600E mutation (OR: 2.90, 4.95 and 7.80 respectively). At internal cross-validation these three features were replicated with high rates (93%, 100% and 98%, respectively). These robust data allowed to build a nomogram for predicting the presence of BRAF mutation by combining the three independent variables. The probability to carry a BRAF-mutated tumour ranged from 4% to 81% with a predictive accuracy >80% and with high sensitivity and specificity (81.2% and 72.1%, respectively). In particular, a RAS-wt mCRC, not mucinous and originated from a left-sided primary occurring in male patients have an extremely poor likelihood to be BRAF mutant (4%). Conversely, female patients with mucinous histology and a right-sided primary RAS-wt tumour have a high probability to carry a BRAF-mutated cancer (81%). Finally, these data were replicated and validated in an external independent population. The predictive performance of the derived model in the context of the VS was impressively superimposable. In a previous experience, Tie et al (Tie ) reported a 50% incidence of BRAF mutation in KRAS-wt females aged ⩾70 years at diagnosis affected by a right-sided colon cancer. Nevertheless, the inclusion of stage I–IV patients, RAS testing limited to KRAS exon 2 mutations and the exclusion of mucinous histology from the model, attenuated the value of the determined correlations. A weakness point of our study is the lack of data on microsatellite instability (MSI). Although the association between MSI-high status and BRAF mutation is well-established (Tran ), the positive prognostic effect of MSI-high makes its occurrence in metastatic patients very uncommon (2–6% Richman ; Goldstein ). Given the above considerations and taking into account that MSI is not routinely tested in the metastatic setting (Van Cutsem ), we could speculate that the inclusion of such variable in our nomogram would not have significantly affected the performance of the model. Also, we did not consider rare BRAF mutations other than V600E. In addition, we did not assess the status of other pathological characteristics potentially associated with BRAF mutational status (Schirripa ; i.e. T and N pathological stage, vascular invasion, tumour budding, lymphocytic infiltrate and number of lymph nodes resected), because this information were not always available and were beyond the purpose of present study. In the era of molecular characterisation, the present nomogram should not be considered a tool to replace the mutational analysis of CRC, but it could allow physicians to better estimate patients' prognosis where BRAF testing is not available or reimbursed because of regulatory restrictions. Moreover, several studies are undergoing worldwide for exploring the efficacy of BRAF-targeting agents. We believe that by applying the proposed nomogram the molecular screening and therefore the overall accrual of those studies could be better implemented in terms of both costs and enrolment performance. Furthermore, the poor prognosis of BRAF-mutant patients makes their earliest identification essential to enable enrolment in clinical trials. In addition, our nomogram may also potentially guide for prospective stratification of future randomized trials thus avoiding costly and time-consuming upfront testing procedures. In addition, the identification of subgroups where BRAF mutation is very likely to occur would theoretically help to decrease the attrition bias of retrospective studies when tumour blocks are no longer available or difficult to retrieve. In the context of CRC, a clear example is given by the Analysis and Research in CAncers of the Digestive system (ARCAD) database: a large international effort for pooling data from major randomized trials, that nowadays includes >20 000 patients from >20 first-line mCRC trials (de Gramont ; Lieu ) and our nomogram may represent a valuable tool for guiding and interpreting the results of subgroup analyses. From a broader perspective, what does a nomogram add to a multivariate model? We believe that while a simple multivariate model allows physicians to identify which are the independent predictors for the occurrence of a specific event, a nomogram, as the one herein proposed, may translate the statistical output of the identified predictors into a single numerical estimate of the probability of an event (Iasonos ), which is, in this case, the chance to have a BRAF mutation. Given the nature of the required information (gender, primary site and histology) and the ease of the graphical interface (Figure 1) this nomogram is extremely valuable and ready-to-use.
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Journal:  Ann Oncol       Date:  2014-02-27       Impact factor: 32.976

7.  FOLFIRI plus cetuximab versus FOLFIRI plus bevacizumab as first-line treatment for patients with metastatic colorectal cancer (FIRE-3): a randomised, open-label, phase 3 trial.

Authors:  Volker Heinemann; Ludwig Fischer von Weikersthal; Thomas Decker; Alexander Kiani; Ursula Vehling-Kaiser; Salah-Eddin Al-Batran; Tobias Heintges; Christian Lerchenmüller; Christoph Kahl; Gernot Seipelt; Frank Kullmann; Martina Stauch; Werner Scheithauer; Jörg Hielscher; Michael Scholz; Sebastian Müller; Hartmut Link; Norbert Niederle; Andreas Rost; Heinz-Gert Höffkes; Markus Moehler; Reinhard U Lindig; Dominik P Modest; Lisa Rossius; Thomas Kirchner; Andreas Jung; Sebastian Stintzing
Journal:  Lancet Oncol       Date:  2014-07-31       Impact factor: 41.316

8.  BRAF mutation predicts for poor outcomes after metastasectomy in patients with metastatic colorectal cancer.

Authors:  Rona Yaeger; Andrea Cercek; Joanne F Chou; Brooke E Sylvester; Nancy E Kemeny; Jaclyn F Hechtman; Marc Ladanyi; Neal Rosen; Martin R Weiser; Marinela Capanu; David B Solit; Michael I D'Angelica; Efsevia Vakiani; Leonard B Saltz
Journal:  Cancer       Date:  2014-04-15       Impact factor: 6.860

9.  Association of age with survival in patients with metastatic colorectal cancer: analysis from the ARCAD Clinical Trials Program.

Authors:  Christopher H Lieu; Lindsay A Renfro; Aimery de Gramont; Jeffrey P Meyers; Timothy S Maughan; Matthew T Seymour; Leonard Saltz; Richard M Goldberg; Daniel J Sargent; S Gail Eckhardt; Cathy Eng
Journal:  J Clin Oncol       Date:  2014-09-20       Impact factor: 44.544

10.  BRAFV600E mutation analysis in patients with metastatic colorectal cancer (mCRC) in daily clinical practice: correlations with clinical characteristics, and its impact on patients' outcome.

Authors:  Zacharenia Saridaki; Maria Tzardi; Maria Sfakianaki; Chara Papadaki; Alexandra Voutsina; Aristea Kalykaki; Ippokratis Messaritakis; Kyriakos Mpananis; Dimitris Mavroudis; Efstathios Stathopoulos; Vassilis Georgoulias; John Souglakos
Journal:  PLoS One       Date:  2013-12-18       Impact factor: 3.240

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  19 in total

1.  The evolving treatment paradigm for BRAF V600 mutant colorectal cancer.

Authors:  Jeremy D Kratz; Dustin A Deming
Journal:  Ann Transl Med       Date:  2019-12

2.  Benefit from upfront FOLFOXIRI and bevacizumab in BRAFV600E-mutated metastatic colorectal cancer patients: does primary tumour location matter?

Authors:  Roberto Moretto; Andrew Elliott; Daniele Rossini; Rossana Intini; Veronica Conca; Filippo Pietrantonio; Andrea Sartore-Bianchi; Carlotta Antoniotti; Cosimo Rasola; Mario Scartozzi; Massimiliano Salati; Nicoletta Pella; Maria Alessandra Calegari; Martina Carullo; Francesca Corti; Gianluca Mauri; Matteo Fassan; Gianluca Masi; Pavel Brodskiy; Heinz-Josef Lenz; Anthony Shields; Sara Lonardi; Michael Korn; Chiara Cremolini
Journal:  Br J Cancer       Date:  2022-06-03       Impact factor: 9.075

3.  Development and Validation of Nomograms to Predict Cancer-Specific Survival and Overall Survival in Elderly Patients With Prostate Cancer: A Population-Based Study.

Authors:  Zhaoxia Zhang; Chenghao Zhanghuang; Jinkui Wang; Xiaomao Tian; Xin Wu; Maoxian Li; Tao Mi; Jiayan Liu; Liming Jin; Mujie Li; Dawei He
Journal:  Front Oncol       Date:  2022-06-23       Impact factor: 5.738

4.  BRAF V600E mutation in metastatic colorectal cancer: Methods of detection and correlation with clinical and pathologic features.

Authors:  Cristin Roma; Anna Maria Rachiglio; Raffaella Pasquale; Francesca Fenizia; Alessia Iannaccone; Fabiana Tatangelo; Giuseppe Antinolfi; Paola Parrella; Paolo Graziano; Lina Sabatino; Vittorio Colantuoni; Gerardo Botti; Evaristo Maiello; Nicola Normanno
Journal:  Cancer Biol Ther       Date:  2016-08-02       Impact factor: 4.742

5.  Differential Radiographic Appearance of BRAF V600E-Mutant Metastatic Colorectal Cancer in Patients Matched by Primary Tumor Location.

Authors:  Chloe E Atreya; Claire Greene; Ryan M McWhirter; Nabia S Ikram; I Elaine Allen; Katherine Van Loon; Alan P Venook; Benjamin M Yeh; Spencer C Behr
Journal:  J Natl Compr Canc Netw       Date:  2016-12       Impact factor: 11.908

6.  Clinical, Pathological and Prognostic Features of Rare BRAF Mutations in Metastatic Colorectal Cancer (mCRC): A Bi-Institutional Retrospective Analysis (REBUS Study).

Authors:  Maria Alessandra Calegari; Lisa Salvatore; Brunella Di Stefano; Michele Basso; Armando Orlandi; Alessandra Boccaccino; Fiorella Lombardo; Alessandra Auriemma; Ina Valeria Zurlo; Maria Bensi; Floriana Camarda; Marta Ribelli; Raffaella Vivolo; Alessandra Cocomazzi; Carmelo Pozzo; Michele Milella; Maurizio Martini; Emilio Bria; Giampaolo Tortora
Journal:  Cancers (Basel)       Date:  2021-04-27       Impact factor: 6.639

7.  Extreme assay sensitivity in molecular diagnostics further unveils intratumour heterogeneity in metastatic colorectal cancer as well as artifactual low-frequency mutations in the KRAS gene.

Authors:  Sara Mariani; Luca Bertero; Simona Osella-Abate; Cristiana Di Bello; Paola Francia di Celle; Vittoria Coppola; Anna Sapino; Paola Cassoni; Caterina Marchiò
Journal:  Br J Cancer       Date:  2017-06-15       Impact factor: 7.640

8.  Prognostic Role of BRAF Mutation in Stage II/III Colorectal Cancer Receiving Curative Resection and Adjuvant Chemotherapy: A Meta-Analysis Based on Randomized Clinical Trials.

Authors:  Lizhen Zhu; Caixia Dong; Ying Cao; Xuefeng Fang; Chenhan Zhong; Dan Li; Ying Yuan
Journal:  PLoS One       Date:  2016-05-03       Impact factor: 3.240

9.  A nomogram improves AJCC stages for colorectal cancers by introducing CEA, modified lymph node ratio and negative lymph node count.

Authors:  Zhen-Yu Zhang; Wei Gao; Qi-Feng Luo; Xiao-Wei Yin; Shiva Basnet; Zhen-Ling Dai; Hai-Yan Ge
Journal:  Sci Rep       Date:  2016-12-12       Impact factor: 4.379

10.  The risk and survival outcome of subsequent primary colorectal cancer after the first primary colorectal cancer: cases from 1973 to 2012.

Authors:  Jiao Yang; Xianglin L Du; Shuting Li; Yinying Wu; Meng Lv; Danfeng Dong; Lingxiao Zhang; Zheling Chen; Biyuan Wang; Fan Wang; Yanwei Shen; Enxiao Li; Min Yi; Jin Yang
Journal:  BMC Cancer       Date:  2017-11-22       Impact factor: 4.430

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