Literature DB >> 26574265

Transferability and nonbond functional form of coarse grained force field - tested on linear alkanes.

Fenglei Cao1, Huai Sun1,2.   

Abstract

Whether or not a coarse grained force field (CGFF) can be made to be transferrable is an important question to be addressed. By comparing potential energy with potential of mean force (PMF) of a molecular dimer, we proposed to use a free energy function (FE-12-6) with the parameters in entropic and energetic terms explicitly to represent the nonbond interactions in CGFF. Although the FE-12-6 function cannot accurately describe the PMF curves, a cancelation of short radii and strong repulsion makes the function a good approximation. For nonpolar molecules represented by linear alkanes, FE-12-6 is demonstrated to be highly effective in representing the nonbond interactions in CGFF. The force field parameters are well transferrable among different alkane molecules, in different thermodynamic states and for predicting various thermodynamic properties including heats of vaporization, vapor-liquid-equilibrium coexistence curves, surface tensions, and liquid densities.

Entities:  

Year:  2015        PMID: 26574265     DOI: 10.1021/acs.jctc.5b00573

Source DB:  PubMed          Journal:  J Chem Theory Comput        ISSN: 1549-9618            Impact factor:   6.006


  2 in total

1.  Prediction of self-assemblies of sodium dodecyl sulfate and fragrance additives using coarse-grained force fields.

Authors:  Chunwei Yang; Zhe Shen; Liang Wu; Haiqiu Tang; Lifeng Zhao; FengLei Cao; Huai Sun
Journal:  J Mol Model       Date:  2017-06-22       Impact factor: 1.810

2.  Understanding Missing Entropy in Coarse-Grained Systems: Addressing Issues of Representability and Transferability.

Authors:  Jaehyeok Jin; Alexander J Pak; Gregory A Voth
Journal:  J Phys Chem Lett       Date:  2019-07-30       Impact factor: 6.475

  2 in total

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