Literature DB >> 26574251

Assessment of DFT methods for computing activation energies of Mo/W-mediated reactions.

Lianrui Hu1, Hui Chen1.   

Abstract

Using high level ab initio coupled cluster calculations as reference, the performances of 15 commonly used density functionals (DFs) on activation energy calculations for typical Mo/W-mediated reactions have been systematically assessed for the first time in this work. The selected representative Mo/W-mediated reactions cover a wide range from enzymatic reactions to organometallic reactions, which include Mo-catalyzed aldehyde oxidation (aldehyde oxidoreductase), Mo-catalyzed dimethyl sulfoxide (DMSO) reduction (DMSO reductase), W-catalyzed acetylene hydration (acetylene hydratase), Mo/W-mediated olefin metathesis, Mo/W-mediated olefin epoxidation, W-mediated alkyne metathesis, and W-mediated C-H bond activation. Covering both Mo- and W-mediated reactions, four DFs of B2GP-PLYP, M06, B2-PLYP, and B3LYP are uniformly recommended with and without DFT empirical dispersion correction. Among these four DFs, B3LYP is notably improved in performance by DFT empirical dispersion correction. In addition to the absolute value of calculation error, if the trend of DFT results is also a consideration, B2GP-PLYP, B2-PLYP, and M06 keep better performance than other functionals tested and constitute our final recommendation of DFs for both Mo- and W-mediated reactions.

Entities:  

Year:  2015        PMID: 26574251     DOI: 10.1021/acs.jctc.5b00373

Source DB:  PubMed          Journal:  J Chem Theory Comput        ISSN: 1549-9618            Impact factor:   6.006


  8 in total

1.  Revised M06-L functional for improved accuracy on chemical reaction barrier heights, noncovalent interactions, and solid-state physics.

Authors:  Ying Wang; Xinsheng Jin; Haoyu S Yu; Donald G Truhlar; Xiao He
Journal:  Proc Natl Acad Sci U S A       Date:  2017-07-24       Impact factor: 11.205

2.  Revised M06 density functional for main-group and transition-metal chemistry.

Authors:  Ying Wang; Pragya Verma; Xinsheng Jin; Donald G Truhlar; Xiao He
Journal:  Proc Natl Acad Sci U S A       Date:  2018-09-20       Impact factor: 11.205

3.  M06-SX screened-exchange density functional for chemistry and solid-state physics.

Authors:  Ying Wang; Pragya Verma; Lujia Zhang; Yaqi Li; Zhonghua Liu; Donald G Truhlar; Xiao He
Journal:  Proc Natl Acad Sci U S A       Date:  2020-01-17       Impact factor: 11.205

4.  Aldehyde Oxidase: Reaction Mechanism and Prediction of Site of Metabolism.

Authors:  Marco Montefiori; Flemming Steen Jørgensen; Lars Olsen
Journal:  ACS Omega       Date:  2017-08-04

5.  MN15: A Kohn-Sham global-hybrid exchange-correlation density functional with broad accuracy for multi-reference and single-reference systems and noncovalent interactions.

Authors:  Haoyu S Yu; Xiao He; Shaohong L Li; Donald G Truhlar
Journal:  Chem Sci       Date:  2016-04-06       Impact factor: 9.825

6.  Hierarchy of Commonly Used DFT Methods for Predicting the Thermochemistry of Rh-Mediated Chemical Transformations.

Authors:  Bilal Ahmad Shiekh
Journal:  ACS Omega       Date:  2019-09-13

7.  Optimization of the r2SCAN-3c Composite Electronic-Structure Method for Use with Slater-Type Orbital Basis Sets.

Authors:  Thomas Gasevic; Julius B Stückrath; Stefan Grimme; Markus Bursch
Journal:  J Phys Chem A       Date:  2022-06-02       Impact factor: 2.944

Review 8.  The Challenging in silico Description of Carbon Monoxide Oxidation as Catalyzed by Molybdenum-Copper CO Dehydrogenase.

Authors:  Anna Rovaletti; Maurizio Bruschi; Giorgio Moro; Ugo Cosentino; Claudio Greco
Journal:  Front Chem       Date:  2019-01-09       Impact factor: 5.221

  8 in total

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