Literature DB >> 26563582

Inverting the G-Tetrad Polarity of a G-Quadruplex by Using Xanthine and 8-Oxoguanine.

Vee Vee Cheong1, Christopher Jacques Lech1, Brahim Heddi1, Anh Tuân Phan2.   

Abstract

G-quadruplexes are four-stranded nucleic acid structures that are built from consecutively stacked guanine tetrad (G-tetrad) assemblies. The simultaneous incorporation of two guanine base lesions, xanthine (X) and 8-oxoguanine (O), within a single G-tetrad of a G-quadruplex was recently shown to lead to the formation of a stable G⋅G⋅X⋅O tetrad. Herein, a judicious introduction of X and O into a human telomeric G-quadruplex-forming sequence is shown to reverse the hydrogen-bond polarity of the modified G-tetrad while preserving the original folding topology. The control exerted over G-tetrad polarity by joint X⋅O modification will be valuable for the design and programming of G-quadruplex structures and their properties.
© 2016 WILEY-VCH Verlag GmbH & Co. KGaA, Weinheim.

Entities:  

Keywords:  8-oxoguanine; DNA structures; G-quadruplexes; NMR spectroscopy; xanthine

Mesh:

Substances:

Year:  2015        PMID: 26563582     DOI: 10.1002/anie.201507034

Source DB:  PubMed          Journal:  Angew Chem Int Ed Engl        ISSN: 1433-7851            Impact factor:   15.336


  8 in total

Review 1.  In What Ways Do Synthetic Nucleotides and Natural Base Lesions Alter the Structural Stability of G-Quadruplex Nucleic Acids?

Authors:  Janos Sagi
Journal:  J Nucleic Acids       Date:  2017-10-18

2.  Self-assembling purine and pteridine quartets: how do π-conjugation patterns affect resonance-assisted hydrogen bonding?

Authors:  Hari Ram Paudel; Ranjita Das; Chia-Hua Wu; Judy I Wu
Journal:  Org Biomol Chem       Date:  2020-01-22       Impact factor: 3.876

3.  Clustered abasic lesions profoundly change the structure and stability of human telomeric G-quadruplexes.

Authors:  Iva Kejnovská; Klára Bednárová; Daniel Renciuk; Zuzana Dvoráková; Petra Školáková; Lukáš Trantírek; Radovan Fiala; Michaela Vorlícková; Janos Sagi
Journal:  Nucleic Acids Res       Date:  2017-05-05       Impact factor: 16.971

Review 4.  Promise of G-Quadruplex Structure Binding Ligands as Epigenetic Modifiers with Anti-Cancer Effects.

Authors:  Antara Sengupta; Akansha Ganguly; Shantanu Chowdhury
Journal:  Molecules       Date:  2019-02-06       Impact factor: 4.411

5.  Cytosine epigenetic modification modulates the formation of an unprecedented G4 structure in the WNT1 promoter.

Authors:  Zi-Fu Wang; Ming-Hao Li; I-Te Chu; Fernaldo R Winnerdy; Anh T Phan; Ta-Chau Chang
Journal:  Nucleic Acids Res       Date:  2020-02-20       Impact factor: 16.971

6.  Impact of Oxidative Lesions on the Human Telomeric G-Quadruplex.

Authors:  Stasė Bielskutė; Janez Plavec; Peter Podbevšek
Journal:  J Am Chem Soc       Date:  2019-02-04       Impact factor: 15.419

7.  Mixed guanine, adenine base quartets: possible roles of protons and metal ions in their stabilization.

Authors:  Dominik A Megger; Patrick M Lax; Jeroen Paauwe; Célia Fonseca Guerra; Bernhard Lippert
Journal:  J Biol Inorg Chem       Date:  2017-12-07       Impact factor: 3.358

Review 8.  Analytical and Structural Studies for the Investigation of Oxidative Stress in Guanine Oligonucleotides.

Authors:  Györgyi Ferenc; Zoltán Váradi; Zoltán Kupihár; Gábor Paragi; Lajos Kovács
Journal:  Int J Mol Sci       Date:  2020-07-15       Impact factor: 5.923

  8 in total

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