| Literature DB >> 26559544 |
Branwen J Hennig1,2, Stefan A Unger1,3, Bai Lamin Dondeh1, Jahid Hassan1, Sophie Hawkesworth1,2,4, Landing Jarjou1, Kerry S Jones4, Sophie E Moore1,2,4, Helen M Nabwera1, Mohammed Ngum1, Ann Prentice1,4, Bakary Sonko1, Andrew M Prentice1,2, Anthony J Fulford1,2.
Abstract
Entities:
Mesh:
Year: 2017 PMID: 26559544 PMCID: PMC5837564 DOI: 10.1093/ije/dyv206
Source DB: PubMed Journal: Int J Epidemiol ISSN: 0300-5771 Impact factor: 7.196
Figure 1.Map of the study area. The Kiang West district is located in the lower river division in The Gambia. Initial surveys were conducted in the core villages—Keneba, Manduar, KantongKunda and Jali (dark grey circles). The MRC Keneba field station now serves all villages in the district (light grey circles) captured by the KW Demographic Surveillance System (KWDSS). There are also two small government health centres (squares labelled M). A midwife is stationed in Jiffarong and the nearest hospital is in Bwiam (square labelled H) outside the district on the main road to the coast, respectively (for more details see Supplementary materials, available as Supplementary data at IJE online).
Figure 2.Schematic representation of time lines of data collection in Kiang West. Studies and surveys, especially those since 2000, are contained within the Kiang West Longitudinal Population Study (KWLPS) electronic databases.
Figure 3.Database structure and data flow for the Kiang West Longitudinal Population Study (KWLPS) cohort. For further details on the KWLPS databases see Supplementary materials (available as Supplementary data at IJE online).
Summary statistics of the Kiang West Longitudinal Population Study (KWLPS) cohort in 2013 and of The Gambia national data in comparison
| Parameter | Kiang West | The Gambia | Unit |
|---|---|---|---|
| Total population | 14 846 | 1 967 709 | Inhabitants |
| Crude birth rate | 34.86 | 30.06 | Births per 1000 people |
| Total fertility rate | 5.50 | 3.73 | Babies per lifetime |
| Crude death rate | 6.40 | 7.17 | Per 1000 people |
| Neonatal mortality rate | 23.44 | 22 | Per 1000 births |
| Post-neonatal mortality rate | 15.63 | 12 | Per 1000 births |
| Infant mortality rate (aged < 1 year) | 39 | 34 | Per 1000 live births |
| Child mortality rate (1–4 years) | 6 | 20 | Per 1000 live 1-year-olds |
| Under-five mortality (< 5 years) | 45 | 54 | Per 1000 live births |
| Crude rate of natural increase | 28.46 | 24.49 | Per 1000 people (birth rate minus crude death rate) |
| In-migration rate | 89.86 | N/A | Per 1000 people |
| Out-migration rate | 88.91 | N/A | Per 1000 people |
| Life expectancy at birth, female | 73.46 (64.94, 81.98) | 63 (N/S) | Years (CI 95%) |
| Life expectancy at birth, male | 65.28 (58.71, 71.84) | 59 (N/S) | Years (CI 95%) |
N/A, not applicable; N/S, not specified.
Data collected in the Keneba Electronic Medical Records System (KEMReS) during each patient encounter
| Data collection stage | General description of data stored |
|---|---|
| Reception | Demographic data retrieved from KWDSS on arrival and updated if required Type of clinic visit (emergency, self-referred, follow-up, child welfare clinic, antenatal, research) |
| Triage | Anthropometry data after double entry by trained staff:
○ Weight (all ages) ○ Height/length (once above 25 years) ○ Head circumference (HC) (< 3 years) ○ Skinfold thickness (SFT) (all ages) ○ MUAC (< 5 years) Vital signs and triage assessment data:
○ Blood pressure, heart rate, respiratory rate, temperature, oxygen saturation ○ Glasgow coma score ○ WHO emergency signs (tick-boxes) ○ WHO priority signs (tick-boxes) Clinical triage (emergency/priority/routine) |
| Doctor/nurse | Vaccination record data (either given in the clinic or from infant welfare care) Details of past medical history:
○ All previous clinic visits since start of KEMRES ○ All known medical conditions of importance ○ Birth history, drug history, drug allergy history, family history ○ Status of breastfeeding (for all women aged 14-50 years) Present complaints (tick boxes for all systems) plus free text for additional information Physical examination details (combination of drop-down lists and tick-boxes for each body system); free text available for any further comments Requested investigations—linked to laboratory Diagnosis with associated ICD-10 code; Drug prescriptions: alerts for drugs presented; drug doses, frequencies and durations recorded and set according to British National Formulary (BNF) guidelines. Information on suggested discharge from clinic and follow-up:
○ None ○ Admission to observation room ○ Admission to nutritional rehabilitation centre ○ Referral for secondary/tertiary care Information on planned review Option for referral letter print-out |
| Midwives | Obstetric history (including date of last menstrual period, previous pregnancies and modes of delivery) Antenatal clinic visit (including fundal height measurements) Delivery (including place, mode and time between rupture of membranes and start of labour) Baby check (including congenital abnormalities, gestational age based on Dubowizc) Postnatal (including any post-partum bleeding) |
| Laboratory | Details of all investigations available at MRC Keneba: blood film (thick/thin), blood glucose, sickle test, HIV test, HcG, VDRL, blood group, sputum acid-fast bacilli (AFB), full blood count (FBC), blood culture (children only), urine analysis, stool examination; free text for additional information |
| Dispensary | Check doctor’s prescription No data entry apart from a record of drugs actually issued |
| Check-out | No data entry Check whether all stages have been completed and investigations done and reviewed No check-out possible if clinic visit incomplete Paper check-out printed for filing |
Data and samples collected as part of the Keneba Biobank
| < 5-year-olds | 5–18 year olds | 18-year-olds | |
|---|---|---|---|
| Questionnaire | N/A | N/A | Education, assets, medication for diabetes and hypertension received outside the district |
| Phenotypes | Weight, height, skinfold thickness, head circumference, mid upper-arm circumference | Weight, height, body composition, blood pressure | Weight, height, body composition, blood pressure |
| Field and laboratory analyses | Malaria test, ZNPP, full blood count | ZNPP, glucose, blood pressure, full blood count | ZNPP, glucose, blood pressure, full blood count |
| Biological samples collected | Unfasted blood (4.0 ml EDTA, 1.2 ml serum) | Fasted blood (4.9 ml EDTA, 1.2 ml LH, 4.5 ml serum) and ∼ 3 ml urine | Fasted blood (4.9 ml EDTA, 1.2 ml LH, 4.5 ml serum) and ∼ 3 ml urine |
| Biological sample aliquots banked | Whole blood, red blood cells, plasma, serum, DNA | Whole blood, red blood cells, plasma, serum, DNA; urine (spun, unspun, acidified) | Whole blood, red blood cells, plasma, serum, DNA, urine (spun, unspun, acidified) |
Weight in kg to the nearest 10 g; height, head circumference and mid upper-arm circumference (MUAC) to the nearest 0.1 cm; body composition by Tanita BC-418 MA analyser; blood pressure Omron 705-CPII; fasting glucose Accu Check (Roche Diagnostics); malaria rapid test (Standard Diagnostics); zinc protoporphyrin (ZnPP) by haematoflurometer (Aviv Biomedical); full blood count by Medonic M-series 3-part haematology analyser (Boule Medical); acidified urine samples treated with concentrated hydrogen chloride; EDTA, ethylenediaminetetraacetic acid; LH, lithium-heparin.
Ten most common clinical diagnoses made per age group between January 2010 and July 2014 at the MRC Keneba clinic
| Age group | < 1 years | 1–4 years | 5-9 years | 10–14 years | 15–19 years | 20–49 years | >50 years | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Number of clinic visits per age group (% of total overall) | 9712 (10) | 16360 (17) | 8544 (9) | 9206 (10) | 7730 (8) | 24951 (27) | 17344 (18) | ||||||||||||||
| Total number of diagnoses / reasons for visit per age group | 13058 | 21254 | 9828 | 10489 | 8913 | 30464 | 23890 | ||||||||||||||
| % | % | % | % | % | % | % | |||||||||||||||
| 10 most common diagnoses / reasons for visit per age group | Common cold | 3031 | 23 | Common cold | 5379 | 25 | Common cold | 1973 | 20 | Common cold | 2005 | 19 | Common cold | 1443 | 16 | Common cold | 2733 | 9 | Hypertension | 6430 | 27 |
| Routine child examination | 1547 | 12 | Viral gastroenteritis | 1612 | 8 | Skin infection | 659 | 7 | Abdominal pain | 886 | 8 | Abdominal pain | 761 | 9 | Unknown diagnosis | 1906 | 6 | Follow up examination | 1871 | 8 | |
| Viral gastroenteritis | 1537 | 12 | Pneumonia | 1299 | 6 | Abdominal pain | 624 | 6 | Headache | 679 | 6 | Unknown diagnosis | 430 | 5 | Headache | 1809 | 6 | Common cold | 1465 | 6 | |
| Pneumonia | 908 | 7 | Follow up examination | 1215 | 6 | Pneumonia | 417 | 4 | Unknown diagnosis | 498 | 5 | Headache | 326 | 4 | Hypertension | 1647 | 5 | Backache | 1248 | 5 | |
| Follow up examination | 901 | 7 | Intestinal helminthiasis | 1093 | 5 | Unknown diagnosis | 388 | 4 | Skin infection | 471 | 4 | Local skin infection | 297 | 3 | Backache | 1630 | 5 | Unknown diagnosis | 983 | 4 | |
| Well without complaint | 492 | 4 | Local skin infection | 1061 | 5 | Headache | 366 | 4 | Conjunctivitis | 316 | 3 | Toothache | 240 | 3 | Abdominal pain | 1405 | 5 | Headache | 893 | 4 | |
| Conjunctivitis | 447 | 3 | Cutaneous abscess | 926 | 4 | Conjunctivitis | 338 | 3 | Injury | 300 | 3 | Tonsillitis | 218 | 2 | Urinary tract infection | 1137 | 4 | Unspecified pain | 768 | 3 | |
| Cutaneous abscess | 376 | 3 | Conjunctivitis | 703 | 3 | Follow up examination | 316 | 3 | Tonsillitis | 281 | 3 | Unspecified pain | 206 | 2 | Follow up examination | 1077 | 4 | Old age | 693 | 3 | |
| Local skin infection | 364 | 3 | Routine child examination | 605 | 3 | Injury | 275 | 3 | Sickle-cell disorders | 275 | 3 | Dysmenorrhoea | 198 | 2 | Unspecified pain | 1064 | 3 | Pneumonia | 692 | 3 | |
| Marasmus | 330 | 3 | Impetigo | 605 | 3 | Intestinal helminthiasis | 242 | 2 | 265 | 3 | 195 | 2 | Epigastric pain | 945 | 3 | Arthritis | 583 | 2 | |||
Diagnoses are classified according to the WHO International Classification of Diseases (ICD) and stored in KEMReS using the ICD-10 coding system. The diagnoses include follow-up examinations (ICD-10 code Z09) and routine child welfare clinic examinations (ICD-10 code 700.1).
aOverall there were 93 847 clinic visits.
bA total overall of 104 839 diagnoses were made.