Literature DB >> 26554163

Genetic Variation of BCL2 (rs2279115), NEIL2 (rs804270), LTA (rs909253), PSCA (rs2294008) and PLCE1 (rs3765524, rs10509670) Genes and Their Correlation to Gastric Cancer Risk Based on Universal Tagged Arrays and Fe3O4 Magnetic Nanoparticles.

Xianbo Mou, Taotao Li, Jiuhai Wang, Zeeshan Ali, Yuanying Zhang, Zhu Chen, Yan Deng, Song Li, Enben Su, Qiongying Jia, Nongyue He, Jian Ni, Daxiang Cui.   

Abstract

With the help of Fe3O4 nagnetic nanoparticles as a solid carrier and an excellent tool for separation, six SNP loci (rs2279115 of BCL2 gene, rs804270 of NEIL2 gene, rs909253 of LTA gene, rs2294008 of PSCA gene, rs3765524 and rs10509670 of PLCE1 gene) were selected to evaluate their relation to gastric cancer risk. Using two kinds of functionalized magnetic nanoparticles and universal tagged arrays, the whole operation procedure including genome DNA extraction and SNP genotyping was performed. All genotypes and allele frequencies were calculated in the cases and controls respectively to analyze their association with gastric cancer risk. Totally 200 pathological samples and 134 normal control subjects were collected. The results demonstrated that four SNP loci (rs2279115, rs804270, rs909253 and rs3765524) showed a potential association with gastric cancer risk, and the other two (rs2294008, rs10509670) possessed no difference/association among cases and controls.

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Year:  2015        PMID: 26554163     DOI: 10.1166/jbn.2015.2113

Source DB:  PubMed          Journal:  J Biomed Nanotechnol        ISSN: 1550-7033            Impact factor:   4.099


  13 in total

1.  Helicobacter pylori infection downregulates the DNA glycosylase NEIL2, resulting in increased genome damage and inflammation in gastric epithelial cells.

Authors:  Ibrahim M Sayed; Ayse Z Sahan; Tatiana Venkova; Anirban Chakraborty; Dibyabrata Mukhopadhyay; Diane Bimczok; Ellen J Beswick; Victor E Reyes; Irina Pinchuk; Debashis Sahoo; Pradipta Ghosh; Tapas K Hazra; Soumita Das
Journal:  J Biol Chem       Date:  2020-06-09       Impact factor: 5.157

Review 2.  Methods for CRISPR-Cas as Ribonucleoprotein Complex Delivery In Vivo.

Authors:  Alesya G Bykonya; Alexander V Lavrov; Svetlana A Smirnikhina
Journal:  Mol Biotechnol       Date:  2022-03-24       Impact factor: 2.695

3.  BAX -248 G>A and BCL2 -938 C>A Variant Lowers the Survival in Patients with Nasopharyngeal Carcinoma and Could be Associated with Tissue-Specific Malignancies: A Multi-Method Approach.

Authors:  Koustav Chatterjee; Saikat De; Sankar Deb Roy; Sushil Kumar Sahu; Arindom Chakraborty; Sandeep Ghatak; Nilanjana Das; Sudipa Mal; Nabanita Roy Chattopadhyay; Piyanki Das; R Rajendra Reddy; Syamantak Mukherjee; Ashok Kumar Das; Zoreng Puii; Eric Zomawia; Yengkhom Indibor Singh; Sam Tsering; Komri Riba; Shanmugam Rajasubramaniam; Amol Ratnakar Suryawanshi; Tathagata Choudhuri
Journal:  Asian Pac J Cancer Prev       Date:  2021-04-01

4.  A Novel Electrochemical Microfluidic Chip Combined with Multiple Biomarkers for Early Diagnosis of Gastric Cancer.

Authors:  Yao Xie; Xiao Zhi; Haichuan Su; Kan Wang; Zhen Yan; Nongyue He; Jingpu Zhang; Di Chen; Daxiang Cui
Journal:  Nanoscale Res Lett       Date:  2015-12-10       Impact factor: 4.703

5.  Association between PSCA gene polymorphisms and the risk of cancer: an updated meta-analysis and trial sequential analysis.

Authors:  Zhiqiang Qin; Jingyuan Tang; Xiao Li; Yajie Yu; Chuanjie Zhang; Peng Han; Ran Li; Xuping Jiang; Chengdi Yang; Wei Wang; Min Tang; Wei Zhang
Journal:  Oncotarget       Date:  2017-04-10

6.  PLCE1 polymorphisms and expression combined with serum AFP level predicts survival of HBV-related hepatocellular carcinoma patients after hepatectomy.

Authors:  Xiwen Liao; Chuangye Han; Wei Qin; Xiaoguang Liu; Long Yu; Guangzhi Zhu; Tingdong Yu; Sicong Lu; Hao Su; Zhen Liu; Zhiwei Chen; Chengkun Yang; Ketuan Huang; Zhengtao Liu; Yu Liang; Jianlu Huang; Jiahong Dong; Lequn Li; Xue Qin; Xinping Ye; Kaiyin Xiao; Minhao Peng; Tao Peng
Journal:  Oncotarget       Date:  2017-04-25

7.  Genetic polymorphisms of Bcl-2 promoter in cancer susceptibility and prognosis: a meta-analysis.

Authors:  Zhongqiang Yao; Binhui Yang; Zhongqiu Liu; Wei Li; Qihua He; Xingchun Peng
Journal:  Oncotarget       Date:  2017-04-11

Review 8.  Helicobacter pylori-induced gastric pathology: insights from in vivo and ex vivo models.

Authors:  Michael D Burkitt; Carrie A Duckworth; Jonathan M Williams; D Mark Pritchard
Journal:  Dis Model Mech       Date:  2017-02-01       Impact factor: 5.758

9.  An Aptamer-Based Probe for Molecular Subtyping of Breast Cancer.

Authors:  Mei Liu; Zhifei Wang; Ting Tan; Zhongsi Chen; Xianbo Mou; Xiaocheng Yu; Yan Deng; Guangming Lu; Nongyue He
Journal:  Theranostics       Date:  2018-11-10       Impact factor: 11.556

10.  PLCE1 Polymorphisms Are Associated With Gastric Cancer Risk: The Changes in Protein Spatial Structure May Play a Potential Role.

Authors:  Xi'e Hu; Jintong Jia; Zhenyu Yang; Songhao Chen; Jingyi Xue; Sensen Duan; Ping Yang; Shujia Peng; Lin Yang; Lijuan Yuan; Guoqiang Bao
Journal:  Front Genet       Date:  2021-08-31       Impact factor: 4.599

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