Literature DB >> 26550826

Allosteric ligands for the pharmacologically dark receptors GPR68 and GPR65.

Xi-Ping Huang1,2, Joel Karpiak3, Wesley K Kroeze1, Hu Zhu1, Xin Chen4,5, Sheryl S Moy6, Kara A Saddoris6, Viktoriya D Nikolova6, Martilias S Farrell1, Sheng Wang1, Thomas J Mangano1,2, Deepak A Deshpande7, Alice Jiang1,2, Raymond B Penn7, Jian Jin4,5, Beverly H Koller8, Terry Kenakin1, Brian K Shoichet3, Bryan L Roth1,2,5.   

Abstract

At least 120 non-olfactory G-protein-coupled receptors in the human genome are 'orphans' for which endogenous ligands are unknown, and many have no selective ligands, hindering the determination of their biological functions and clinical relevance. Among these is GPR68, a proton receptor that lacks small molecule modulators for probing its biology. Using yeast-based screens against GPR68, here we identify the benzodiazepine drug lorazepam as a non-selective GPR68 positive allosteric modulator. More than 3,000 GPR68 homology models were refined to recognize lorazepam in a putative allosteric site. Docking 3.1 million molecules predicted new GPR68 modulators, many of which were confirmed in functional assays. One potent GPR68 modulator, ogerin, suppressed recall in fear conditioning in wild-type but not in GPR68-knockout mice. The same approach led to the discovery of allosteric agonists and negative allosteric modulators for GPR65. Combining physical and structure-based screening may be broadly useful for ligand discovery for understudied and orphan GPCRs.

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Year:  2015        PMID: 26550826      PMCID: PMC4796946          DOI: 10.1038/nature15699

Source DB:  PubMed          Journal:  Nature        ISSN: 0028-0836            Impact factor:   49.962


  56 in total

1.  Ligand-supported homology modeling of g-protein-coupled receptor sites: models sufficient for successful virtual screening.

Authors:  Andreas Evers; Gerhard Klebe
Journal:  Angew Chem Int Ed Engl       Date:  2004-01       Impact factor: 15.336

2.  Rapid context-dependent ligand desolvation in molecular docking.

Authors:  Michael M Mysinger; Brian K Shoichet
Journal:  J Chem Inf Model       Date:  2010-09-27       Impact factor: 4.956

3.  Differential contribution of amygdala and hippocampus to cued and contextual fear conditioning.

Authors:  R G Phillips; J E LeDoux
Journal:  Behav Neurosci       Date:  1992-04       Impact factor: 1.912

4.  Tracazolate reveals a novel type of allosteric interaction with recombinant gamma-aminobutyric acid(A) receptors.

Authors:  Sally-Anne Thompson; Peter B Wingrove; Linda Connelly; Paul J Whiting; Keith A Wafford
Journal:  Mol Pharmacol       Date:  2002-04       Impact factor: 4.436

5.  Prostaglandin I(2) production and cAMP accumulation in response to acidic extracellular pH through OGR1 in human aortic smooth muscle cells.

Authors:  Hideaki Tomura; Ju-Qiang Wang; Mayumi Komachi; Alatangaole Damirin; Chihiro Mogi; Masayuki Tobo; Junko Kon; Norihiko Misawa; Koichi Sato; Fumikazu Okajima
Journal:  J Biol Chem       Date:  2005-08-08       Impact factor: 5.157

6.  Extracellular acidification induces connective tissue growth factor production through proton-sensing receptor OGR1 in human airway smooth muscle cells.

Authors:  Shinichi Matsuzaki; Tamotsu Ishizuka; Hidenori Yamada; Yosuke Kamide; Takeshi Hisada; Isao Ichimonji; Haruka Aoki; Masakiyo Yatomi; Mayumi Komachi; Hiroaki Tsurumaki; Akihiro Ono; Yasuhiko Koga; Kunio Dobashi; Chihiro Mogi; Koichi Sato; Hideaki Tomura; Masatomo Mori; Fumikazu Okajima
Journal:  Biochem Biophys Res Commun       Date:  2011-09-01       Impact factor: 3.575

7.  Ovarian cancer G protein-coupled receptor 1, a new metastasis suppressor gene in prostate cancer.

Authors:  Lisam Shanjukumar Singh; Michael Berk; Rhonda Oates; Zhenwen Zhao; Haiyan Tan; Ying Jiang; Aimin Zhou; Kashif Kirmani; Rosemary Steinmetz; Daniel Lindner; Yan Xu
Journal:  J Natl Cancer Inst       Date:  2007-08-28       Impact factor: 13.506

8.  Ovarian cancer G-protein-coupled receptor 1 induces the expression of the pain mediator prostaglandin E2 in response to an acidic extracellular environment in human osteoblast-like cells.

Authors:  Juqiang Wang; Yu Sun; Hideaki Tomura; Fumikazu Okajima
Journal:  Int J Biochem Cell Biol       Date:  2012-07-23       Impact factor: 5.085

9.  The adenosine A1 receptor antagonist SLV320 reduces myocardial fibrosis in rats with 5/6 nephrectomy without affecting blood pressure.

Authors:  P Kalk; B Eggert; K Relle; M Godes; S Heiden; Y Sharkovska; Y Fischer; D Ziegler; G-W Bielenberg; B Hocher
Journal:  Br J Pharmacol       Date:  2007-06-11       Impact factor: 8.739

10.  Metabolic acidosis increases intracellular calcium in bone cells through activation of the proton receptor OGR1.

Authors:  Kevin K Frick; Nancy S Krieger; Keith Nehrke; David A Bushinsky
Journal:  J Bone Miner Res       Date:  2009-02       Impact factor: 6.741

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  102 in total

1.  G protein-coupled receptors: Illuminating orphan GPCRs.

Authors:  Sarah Crunkhorn
Journal:  Nat Rev Drug Discov       Date:  2016-01       Impact factor: 84.694

Review 2.  Identifying ligands at orphan GPCRs: current status using structure-based approaches.

Authors:  Tony Ngo; Irina Kufareva; James Lj Coleman; Robert M Graham; Ruben Abagyan; Nicola J Smith
Journal:  Br J Pharmacol       Date:  2016-03-05       Impact factor: 8.739

3.  CRISPR-addressable yeast strains with applications in human G protein-coupled receptor profiling and synthetic biology.

Authors:  Jacob B Rowe; Geoffrey J Taghon; Nicholas J Kapolka; William M Morgan; Daniel G Isom
Journal:  J Biol Chem       Date:  2020-05-01       Impact factor: 5.157

4.  Validation strategies for target prediction methods.

Authors:  Neann Mathai; Ya Chen; Johannes Kirchmair
Journal:  Brief Bioinform       Date:  2020-05-21       Impact factor: 11.622

5.  Discovery of a Positive Allosteric Modulator of the Thyrotropin Receptor: Potentiation of Thyrotropin-Mediated Preosteoblast Differentiation In Vitro.

Authors:  Susanne Neumann; Elena Eliseeva; Alisa Boutin; Elena Barnaeva; Marc Ferrer; Noel Southall; David Kim; Xin Hu; Sarah J Morgan; Juan J Marugan; Marvin C Gershengorn
Journal:  J Pharmacol Exp Ther       Date:  2017-10-31       Impact factor: 4.030

Review 6.  Docking Screens for Novel Ligands Conferring New Biology.

Authors:  John J Irwin; Brian K Shoichet
Journal:  J Med Chem       Date:  2016-03-15       Impact factor: 7.446

7.  Design, Synthesis, and Characterization of Ogerin-Based Positive Allosteric Modulators for G Protein-Coupled Receptor 68 (GPR68).

Authors:  Xufen Yu; Xi-Ping Huang; Terry P Kenakin; Samuel T Slocum; Xin Chen; Michael L Martini; Jing Liu; Jian Jin
Journal:  J Med Chem       Date:  2019-08-01       Impact factor: 7.446

8.  Discovery and Characterization of Novel GPR39 Agonists Allosterically Modulated by Zinc.

Authors:  Seiji Sato; Xi-Ping Huang; Wesley K Kroeze; Bryan L Roth
Journal:  Mol Pharmacol       Date:  2016-10-17       Impact factor: 4.436

Review 9.  The proton-sensing receptor ovarian cancer G-protein coupled receptor 1 (OGR1) in airway physiology and disease.

Authors:  Ajay P Nayak; Raymond B Penn
Journal:  Curr Opin Pharmacol       Date:  2020-04-29       Impact factor: 5.547

10.  Differential Roles of Extracellular Histidine Residues of GPR68 for Proton-Sensing and Allosteric Modulation by Divalent Metal Ions.

Authors:  Xi-Ping Huang; Terrence P Kenakin; Shuo Gu; Brian K Shoichet; Bryan L Roth
Journal:  Biochemistry       Date:  2020-09-10       Impact factor: 3.162

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