| Literature DB >> 26546689 |
Guanjun Cen1, Yonghao Yu2, Xianru Zeng3, Xiuzhen Long3, Dewei Wei3, Xuyuan Gao3, Tao Zeng3.
Abstract
In insects, the frequency distribution of the measurements of sclerotized body parts is generally used to classify larval instars and is characterized by a multimodal overlap between instar stages. Nonparametric methods with fixed bandwidths, such as histograms, have significant limitations when used to fit this type of distribution, making it difficult to identify divisions between instars. Fixed bandwidths have also been chosen somewhat subjectively in the past, which is another problem. In this study, we describe an adaptive kernel smoothing method to differentiate instars based on discontinuities in the growth rates of sclerotized insect body parts. From Brooks' rule, we derived a new standard for assessing the quality of instar classification and a bandwidth selector that more accurately reflects the distributed character of specific variables. We used this method to classify the larvae of Austrosimulium tillyardianum (Diptera: Simuliidae) based on five different measurements. Based on head capsule width and head capsule length, the larvae were separated into nine instars. Based on head capsule postoccipital width and mandible length, the larvae were separated into 8 instars and 10 instars, respectively. No reasonable solution was found for antennal segment 3 length. Separation of the larvae into nine instars using head capsule width or head capsule length was most robust and agreed with Crosby's growth rule. By strengthening the distributed character of the separation variable through the use of variable bandwidths, the adaptive kernel smoothing method could identify divisions between instars more effectively and accurately than previous methods.Entities:
Keywords: Austrosimulium tillyardianum; adaptive kernel smoothing estimation; bandwidth selection; instar determination method
Mesh:
Year: 2015 PMID: 26546689 PMCID: PMC4635999 DOI: 10.1093/jisesa/iev136
Source DB: PubMed Journal: J Insect Sci ISSN: 1536-2442 Impact factor: 1.857
Fig. 1.Frequency distribution pattern of measurements for sclerotized body parts in insects.
Parameter (i.e.,,, , ) estimates of equations 3 and 7 based on Crosby’s (1974) instar determinations for the larvae of A. tillyardianum
| Variable | The test set | The standardization set and the test set | ||||||
|---|---|---|---|---|---|---|---|---|
| HCW | 4.4179 | 0.2181 | 1.9631 | 1.9947 | 4.3740 | 0.2264 | 2.0372 | 2.0132 |
| HCL | 4.6308 | 0.2302 | 2.0720 | 2.0914 | 4.5768 | 0.2334 | 2.1008 | 2.0463 |
| HCPW | 4.3458 | 0.2065 | 1.8588 | 1.8993 | 4.3377 | 0.2080 | 1.8724 | 1.9380 |
| ML | 3.7067 | 0.2316 | 2.0842 | 2.1203 | 3.6720 | 0.2417 | 2.1752 | 2.1477 |
| AS3L | 3.2616 | 0.2574 | 2.3163 | 2.3341 | 3.2762 | 0.2605 | 2.3448 | 2.2224 |
Fig. 2.Adaptive kernel density estimates of five variables with m = 9. *Local minimum of the density estimation curve based on the test set. (a) h = 11.2713; (b) h = 14.8690; (c) h = 9.8230; (d) h = 5.9555; (e) h = 4.3462.
Estimates of the parameters in each step of the kernel smoothing method used to classify instars of A. tillyardianum larvae based on the test set
| Variable | Statistic | |||||||
|---|---|---|---|---|---|---|---|---|
| 4 | 5 | 6 | 7 | 8 | 9 | 10 | ||
| HCW | 4 | 4 | 7 | 7 | 7 | 9 | 10 | |
| 29.3708 | 22.2707 | 17.9158 | 14.9778 | 12.8640 | 11.2713 | 10.0284 | ||
| 0.4352 | 0.4229 | 0.2756 | 0.2757 | 0.2757 | 0.2198 | 0.1872 | ||
| 1.7409 | 1.6915 | 1.9293 | 1.9301 | 1.9301 | 1.9783 | 1.8716 | ||
| Crosby’s ratio | 0.2930 | 0.2742 | 0.1263 | 0.1165 | 0.1165 | 0.0693 | 0.0752 | |
| 0.9559 | 0.9651 | 0.9912 | 0.9922 | 0.9922 | 0.9970 | 0.9904 | ||
| HCL | 3 | 6 | 8 | 8 | 8 | 9 | 10 | |
| 39.0390 | 29.5194 | 23.7041 | 19.7916 | 16.9825 | 14.8690 | 13.2219 | ||
| 0.7376 | 0.3039 | 0.2299 | 0.2299 | 0.2299 | 0.2296 | 0.2125 | ||
| 2.2129 | 1.8234 | 1.8394 | 1.8394 | 1.8394 | 2.0660 | 2.1246 | ||
| Crosby’s ratio | 0.2529 | 0.2012 | 0.1837 | 0.1837 | 0.1837 | 0.1089 | 0.1133 | |
| 0.9871 | 0.9869 | 0.9677 | 0.9677 | 0.9677 | 0.9848 | 0.9905 | ||
| HCPW | 3 | 4 | 5 | 5 | 7 | 8 | 9 | |
| 25.4083 | 19.3188 | 15.5688 | 13.0319 | 11.2031 | 9.8230 | 8.7448 | ||
| 0.6599 | 0.4151 | 0.3146 | 0.3146 | 0.2606 | 0.2334 | 0.1959 | ||
| 1.9796 | 1.6606 | 1.5729 | 1.5729 | 1.8245 | 1.8674 | 1.7632 | ||
| Crosby’s ratio | 0.2008 | 0.2570 | 0.2592 | 0.2592 | 0.1082 | 0.1082 | 0.1560 | |
| 0.9905 | 0.9694 | 0.9694 | 0.9272 | 0.9427 | 0.9782 | 0.9664 | ||
| ML | 4 | 6 | 6 | 9 | 9 | 10 | 10 | |
| 15.6716 | 11.8402 | 9.5025 | 7.9311 | 6.8035 | 5.9555 | 5.2948 | ||
| 0.4937 | 0.3457 | 0.3471 | 0.2018 | 0.2025 | 0.2025 | 0.2026 | ||
| 1.9750 | 2.0744 | 2.0227 | 1.8161 | 1.8225 | 2.0846 | 2.0261 | ||
| Crosby’s ratio | 0.1367 | 0.0887 | 0.1109 | 0.1648 | 0.1581 | 0.1058 | 0.1058 | |
| 0.9892 | 0.9847 | 0.9852 | 0.9771 | 0.9779 | 0.9893 | 0.9887 | ||
| AS3L | 5 | 7 | 8 | 8 | 8 | 8 | 8 | |
| 11.6309 | 8.7328 | 6.9803 | 5.8095 | 4.9731 | 4.3462 | 3.8591 | ||
| 0.4490 | 0.3129 | 0.2574 | 0.2575 | 0.2575 | 0.2315 | 0.2307 | ||
| 2.2450 | 2.1903 | 2.0595 | 2.0596 | 2.0596 | 2.0886 | 2.0964 | ||
| Crosby’s ratio | 0.3247 | 0.1611 | 0.1611 | 0.1611 | 0.1611 | 0.1611 | 0.1611 | |
| 0.9140 | 0.9814 | 0.9621 | 0.9631 | 0.9631 | 0.9470 | 0.9472 | ||
aThe value of Crosby’s ratio in Table 2 is the maximum of Crosby’s ratio for a given m.
Fig. 3.Adaptive kernel density estimates of five variables with m = 9. *Local minimum of the density estimation curve based on the standard set. (a) h = 10.5223; (b) h = 13.1736; (c) h = 9.1904; (d) h = 5.1915; (e) h = 4.6003.