Literature DB >> 26542230

Electrochemical Measurement of the β-Galactosidase Reporter from Live Cells: A Comparison to the Miller Assay.

Tanya Tschirhart1, Xinyi Y Zhou1, Hana Ueda, Chen-Yu Tsao1, Eunkyoung Kim, Gregory F Payne1, William E Bentley1.   

Abstract

In order to match our ability to conceive of and construct cells with enhanced function, we must concomitantly develop facile, real-time methods for elucidating performance. With these, new designs can be tested in silico and steps in construction incrementally validated. Electrochemical monitoring offers the above advantages largely because signal transduction stems from direct electron transfer, allowing for potentially quicker and more integrated measurements. One of the most common genetic reporters, β-galactosidase, can be measured both spectrophotometrically (Miller assay) and electrochemically. However, since the relationship between the two is not well understood, the electrochemical methods have not yet garnered the attention of biologists. With the aim of demonstrating the utility of an electrochemical measurement to the synthetic biology community, we created a genetic construct that interprets and reports (with β-galactosidase) on the concentration of the bacterial quorum sensing molecule autoinducer-2. In this work, we provide a correlation between electrochemical measurements and Miller Units. We show that the electrochemical assay works with both lysed and whole cells, allowing for the prediction of one from the other, and for continuous monitoring of cell response. We further present a conceptually simple and generalized mathematical model for cell-based β-galactosidase reporter systems that could aid in building and predicting a variety of synthetic biology constructs. This first-ever in-depth comparison and analysis aims to facilitate the use of electrochemical real-time monitoring in the field of synthetic biology as well as to facilitate the creation of constructs that can more easily communicate information to electronic systems.

Entities:  

Keywords:  AI-2; biosensors; cell sensors; electrochemistry; molecular communication; quorum sensing

Mesh:

Substances:

Year:  2015        PMID: 26542230     DOI: 10.1021/acssynbio.5b00073

Source DB:  PubMed          Journal:  ACS Synth Biol        ISSN: 2161-5063            Impact factor:   5.110


  11 in total

1.  Multiplexed assessment of engineered bacterial constructs for intracellular β-galactosidase expression by redox amplification on catechol-chitosan modified nanoporous gold.

Authors:  Yi Liu; John H Moore; Svetlana Harbaugh; Jorge Chavez; Chia-Fu Chou; Nathan S Swami
Journal:  Mikrochim Acta       Date:  2021-12-02       Impact factor: 5.833

2.  Catechol-Based Capacitor for Redox-Linked Bioelectronics.

Authors:  Si Wu; Eunkyoung Kim; Jinyang Li; William E Bentley; Xiao-Wen Shi; Gregory F Payne
Journal:  ACS Appl Electron Mater       Date:  2019-07-03

3.  Redox Is a Global Biodevice Information Processing Modality.

Authors:  Eunkyoung Kim; Jinyang Li; Mijeong Kang; Deanna L Kelly; Shuo Chen; Alessandra Napolitano; Lucia Panzella; Xiaowen Shi; Kun Yan; Si Wu; Jana Shen; William E Bentley; Gregory F Payne
Journal:  Proc IEEE Inst Electr Electron Eng       Date:  2019-04-29       Impact factor: 10.961

4.  Fusing Sensor Paradigms to Acquire Chemical Information: An Integrative Role for Smart Biopolymeric Hydrogels.

Authors:  Eunkyoung Kim; Yi Liu; Hadar Ben-Yoav; Thomas E Winkler; Kun Yan; Xiaowen Shi; Jana Shen; Deanna L Kelly; Reza Ghodssi; William E Bentley; Gregory F Payne
Journal:  Adv Healthc Mater       Date:  2016-09-12       Impact factor: 9.933

Review 5.  Biofabricating Functional Soft Matter Using Protein Engineering to Enable Enzymatic Assembly.

Authors:  Yi Liu; Hsuan-Chen Wu; Narendranath Bhokisham; Jinyang Li; Kai-Lin Hong; David N Quan; Chen-Yu Tsao; William E Bentley; Gregory F Payne
Journal:  Bioconjug Chem       Date:  2018-05-16       Impact factor: 4.774

6.  Insightful directed evolution of Escherichia coli quorum sensing promoter region of the lsrACDBFG operon: a tool for synthetic biology systems and protein expression.

Authors:  Pricila Hauk; Kristina Stephens; Ryan Mckay; Chelsea Ryan Virgile; Hana Ueda; Marc Ostermeier; Kyoung-Seok Ryu; Herman O Sintim; William E Bentley
Journal:  Nucleic Acids Res       Date:  2016-10-24       Impact factor: 16.971

7.  Electronic control of gene expression and cell behaviour in Escherichia coli through redox signalling.

Authors:  Tanya Tschirhart; Eunkyoung Kim; Ryan McKay; Hana Ueda; Hsuan-Chen Wu; Alex Eli Pottash; Amin Zargar; Alejandro Negrete; Joseph Shiloach; Gregory F Payne; William E Bentley
Journal:  Nat Commun       Date:  2017-01-17       Impact factor: 14.919

8.  Interfacing gene circuits with microelectronics through engineered population dynamics.

Authors:  M Omar Din; Aida Martin; Ivan Razinkov; Nicholas Csicsery; Jeff Hasty
Journal:  Sci Adv       Date:  2020-05-22       Impact factor: 14.136

9.  A Novel Bioelectronic Reporter System in Living Cells Tested with a Synthetic Biological Comparator.

Authors:  Ji Zeng; Areen Banerjee; Jaewook Kim; Yijie Deng; Tim W Chapman; Ramez Daniel; Rahul Sarpeshkar
Journal:  Sci Rep       Date:  2019-05-13       Impact factor: 4.379

10.  Bacteria Floc, but Do They Flock? Insights from Population Interaction Models of Quorum Sensing.

Authors:  Hana Ueda; Kristina Stephens; Konstantina Trivisa; William E Bentley
Journal:  mBio       Date:  2019-05-28       Impact factor: 7.867

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