Literature DB >> 26542112

How fluorescent labelling alters the solution behaviour of proteins.

M K Quinn1, N Gnan2, S James1, A Ninarello3, F Sciortino4, E Zaccarelli4, J J McManus1.   

Abstract

A complete understanding of the role of molecular anisotropy in directing the self assembly of colloids and proteins remains a challenge for soft matter science and biophysics. For proteins in particular, the complexity of the surface at a molecular level poses a challenge for any theoretical and numerical description. A soft matter approach, based on patchy models, has been useful in describing protein phase behaviour. In this work we examine how chemical modification of the protein surface, by addition of a fluorophore, affects the physical properties of protein solutions. By using a carefully controlled experimental protein model (human gamma-D crystallin) and numerical simulations, we demonstrate that protein solution behaviour defined by anisotropic surface effects can be captured by a custom patchy particle model. In particular, the chemical modification is found to be equivalent to the addition of a large hydrophobic surface patch with a large attractive potential energy well, which produces a significant increase in the temperature at which liquid-liquid phase separation occurs, even for very low fractions of fluorescently labelled proteins. These results are therefore directly relevant to all applications based on the use of fluorescent labelling by chemical modification, which have become increasingly important in the understanding of biological processes and biophysical interactions.

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Year:  2015        PMID: 26542112     DOI: 10.1039/c5cp04463d

Source DB:  PubMed          Journal:  Phys Chem Chem Phys        ISSN: 1463-9076            Impact factor:   3.676


  7 in total

1.  Temperature-Dependent Interactions Explain Normal and Inverted Solubility in a γD-Crystallin Mutant.

Authors:  Amir R Khan; Susan James; Michelle K Quinn; Irem Altan; Patrick Charbonneau; Jennifer J McManus
Journal:  Biophys J       Date:  2019-07-19       Impact factor: 4.033

2.  Liquid network connectivity regulates the stability and composition of biomolecular condensates with many components.

Authors:  Jorge R Espinosa; Jerelle A Joseph; Ignacio Sanchez-Burgos; Adiran Garaizar; Daan Frenkel; Rosana Collepardo-Guevara
Journal:  Proc Natl Acad Sci U S A       Date:  2020-06-01       Impact factor: 11.205

3.  Modeling phase transitions in mixtures of β-γ lens crystallins.

Authors:  Miha Kastelic; Yurij V Kalyuzhnyi; Vojko Vlachy
Journal:  Soft Matter       Date:  2016-08-15       Impact factor: 3.679

4.  Model for screened, charge-regulated electrostatics of an eye lens protein: Bovine gammaB-crystallin.

Authors:  Christopher W Wahle; K Michael Martini; Dawn M Hollenbeck; Andreas Langner; David S Ross; John F Hamilton; George M Thurston
Journal:  Phys Rev E       Date:  2017-09-25       Impact factor: 2.529

5.  How Fluorescent Tags Modify Oligomer Size Distributions of the Alzheimer Peptide.

Authors:  Jana Wägele; Silvia De Sio; Bruno Voigt; Jochen Balbach; Maria Ott
Journal:  Biophys J       Date:  2018-12-19       Impact factor: 4.033

6.  Liquid-Liquid Phase Separation of Patchy Particles Illuminates Diverse Effects of Regulatory Components on Protein Droplet Formation.

Authors:  Valery Nguemaha; Huan-Xiang Zhou
Journal:  Sci Rep       Date:  2018-04-30       Impact factor: 4.379

7.  Single-molecule fluorescence detection of a tricyclic nucleoside analogue.

Authors:  George N Samaan; Mckenzie K Wyllie; Julian M Cizmic; Lisa-Maria Needham; David Nobis; Katrina Ngo; Susan Andersen; Steven W Magennis; Steven F Lee; Byron W Purse
Journal:  Chem Sci       Date:  2020-12-28       Impact factor: 9.825

  7 in total

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