Literature DB >> 26531250

Importance of demographic history for phylogeographic inference on the arctic-alpine plant Phyllodoce caerulea in East Asia.

H Ikeda1, S Sakaguchi2, V Yakubov3, V Barkalov3, H Setoguchi4.   

Abstract

Arctic-alpine plants have enormous ranges in the Northern Hemisphere. Phylogeographic studies have provided insights into their glacial survival as well as their postglacial colonization history. However, our understanding of the population dynamics of disjunct alpine populations in temperate regions remains limited. During Pleistocene cold periods, alpine populations of arctic-alpine species in East Asia were either connected to an ice-free Beringia refugium or they persisted with prolonged isolation after their establishment. To estimate which of these scenarios is more likely, we elucidated the genetic structure of Phyllodoce caerulea (Ericaceae) in Beringia and northern Japan, East Asia. Sequence variation in multiple nuclear loci revealed that P. caerulea can be distinguished into northern and southern groups. A demographic analysis demonstrated that the north-south divergence did not predate the last glacial period and detected introgression from Phyllodoce aleutica, relative widely distributed in East Asia, exclusively into the southern group. Therefore, although there has been genetic divergence between northern Japan and Beringia in P. caerulea, the divergence is unlikely to have resulted from their prolonged geographic separation throughout several cycles of glacial and interglacial periods. Instead, our study suggests that the introgression contributed to the genetic divergence of P. caerulea and that the range of P. caerulea was plausibly connected between northern Japan and Beringia during the last glacial period. Overall, our study not only provides a biogeographic insight into alpine populations of arctic-alpine plants in East Asia but also emphasizes the importance of careful interpretation of genetic structure for inferring phylogeographic history.

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Year:  2015        PMID: 26531250      PMCID: PMC4806892          DOI: 10.1038/hdy.2015.95

Source DB:  PubMed          Journal:  Heredity (Edinb)        ISSN: 0018-067X            Impact factor:   3.821


  21 in total

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2.  Inference of population structure using multilocus genotype data: linked loci and correlated allele frequencies.

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5.  Comparative phylogeography and postglacial colonization routes in Europe.

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7.  Statistical method for testing the neutral mutation hypothesis by DNA polymorphism.

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8.  Natural selection on PHYE by latitude in the Japanese archipelago: insight from locus specific phylogeographic structure in Arcterica nana (Ericaceae).

Authors:  Hajime Ikeda; Hiroaki Setoguchi
Journal:  Mol Ecol       Date:  2010-06-10       Impact factor: 6.185

9.  Variations in bumble bee preference and pollen limitation among neighboring populations: comparisons between Phyllodoce caerulea and Phyllodoce aleutica (Ericaceae) along snowmelt gradients.

Authors:  Tetsuya Kasagi; Gaku Kudo
Journal:  Am J Bot       Date:  2003-09       Impact factor: 3.844

10.  ABCtoolbox: a versatile toolkit for approximate Bayesian computations.

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Journal:  BMC Bioinformatics       Date:  2010-03-04       Impact factor: 3.169

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