Literature DB >> 26530670

Comprehensive Mitochondrial Genome Analysis by Massively Parallel Sequencing.

Meagan E Palculict1, Victor Wei Zhang1, Lee-Jun Wong1, Jing Wang2.   

Abstract

Next-generation sequencing (NGS) based on massively parallel sequencing (MPS) of the entire 16,569 bp mitochondrial genome generates thousands of reads for each nucleotide position. The high-throughput sequence data generated allow the detection of mitochondrial DNA (mtDNA) point mutations and deletions with the ability to accurately quantify the mtDNA point mutation heteroplasmy and to determine the deletion breakpoints. In addition, this method is particularly sensitive for the detection of low-level mtDNA large deletions and multiple deletions. It is by far the most powerful tool for molecular diagnosis of mtDNA disorders.

Entities:  

Keywords:  Massively parallel sequencing; Mitochondrial whole genome; Next-generation sequencing; mtDNA deletions; mtDNA mutation heteroplasmy

Mesh:

Substances:

Year:  2016        PMID: 26530670     DOI: 10.1007/978-1-4939-3040-1_1

Source DB:  PubMed          Journal:  Methods Mol Biol        ISSN: 1064-3745


  11 in total

1.  Mitochondrial DNA Deletions With Low-Level Heteroplasmy in Adult-Onset Myopathy.

Authors:  Doris G Leung; Julie S Cohen; Elizabeth Harlan Michelle; Renkui Bai; Andrew L Mammen; Lisa Christopher-Stine
Journal:  J Clin Neuromuscul Dis       Date:  2018-03

2.  Long read mitochondrial genome sequencing using Cas9-guided adaptor ligation.

Authors:  Amy R Vandiver; Brittany Pielstick; Timothy Gilpatrick; Austin N Hoang; Hillary J Vernon; Jonathan Wanagat; Winston Timp
Journal:  Mitochondrion       Date:  2022-07-03       Impact factor: 4.534

3.  Advanced approach for comprehensive mtDNA genome testing in mitochondrial disease.

Authors:  Jing Wang; Jorune Balciuniene; Maria Alejandra Diaz-Miranda; Elizabeth M McCormick; Erfan Aref-Eshghi; Alison M Muir; Kajia Cao; Juliana Troiani; Alicia Moseley; Zhiqian Fan; Zarazuela Zolkipli-Cunningham; Amy Goldstein; Rebecca D Ganetzky; Colleen C Muraresku; James T Peterson; Nancy B Spinner; Douglas C Wallace; Matthew C Dulik; Marni J Falk
Journal:  Mol Genet Metab       Date:  2021-12-18       Impact factor: 4.204

4.  Detection of mitochondrial DNA (mtDNA) mutations.

Authors:  Ali Naini; Robert Gilkerson; Sara Shanske; Jiuhong Pang
Journal:  Methods Cell Biol       Date:  2019-12-02       Impact factor: 1.441

5.  Loss of Oxidation Resistance 1, OXR1, Is Associated with an Autosomal-Recessive Neurological Disease with Cerebellar Atrophy and Lysosomal Dysfunction.

Authors:  Julia Wang; Justine Rousseau; Emily Kim; Sophie Ehresmann; Yi-Ting Cheng; Lita Duraine; Zhongyuan Zuo; Ye-Jin Park; David Li-Kroeger; Weimin Bi; Lee-Jun Wong; Jill Rosenfeld; Joseph Gleeson; Eissa Faqeih; Fowzan S Alkuraya; Klaas J Wierenga; Jiani Chen; Alexandra Afenjar; Caroline Nava; Diane Doummar; Boris Keren; Jane Juusola; Markus Grompe; Hugo J Bellen; Philippe M Campeau
Journal:  Am J Hum Genet       Date:  2019-11-27       Impact factor: 11.025

6.  Frequency of inborn errors of metabolism screening for children with unexplained acute encephalopathy at an emergency department.

Authors:  Mamdouh Abdel Maksoud; Solaf Mohamed ELsayed; Rania H Shatla; Abdulbasit Abdulhalim Imam; Riad M Elsayed; Amira Aa Mosabah; Ashraf M Sherif
Journal:  Neuropsychiatr Dis Treat       Date:  2018-06-29       Impact factor: 2.570

7.  Endocrine Manifestations and New Developments in Mitochondrial Disease.

Authors:  Yi Shiau Ng; Albert Zishen Lim; Grigorios Panagiotou; Doug M Turnbull; Mark Walker
Journal:  Endocr Rev       Date:  2022-05-12       Impact factor: 25.261

8.  Heteroplasmic Variants of Mitochondrial DNA in Atherosclerotic Lesions of Human Aortic Intima.

Authors:  Igor A Sobenin; Andrey V Zhelankin; Zukhra B Khasanova; Vasily V Sinyov; Lyudmila V Medvedeva; Maria O Sagaidak; Vsevolod J Makeev; Kira I Kolmychkova; Anna S Smirnova; Vasily N Sukhorukov; Anton Y Postnov; Andrey V Grechko; Alexander N Orekhov
Journal:  Biomolecules       Date:  2019-09-06

Review 9.  "Mitochondrial Toolbox" - A Review of Online Resources to Explore Mitochondrial Genomics.

Authors:  Ruaidhri Cappa; Cassio de Campos; Alexander P Maxwell; Amy J McKnight
Journal:  Front Genet       Date:  2020-05-08       Impact factor: 4.772

10.  Association Between Epilepsy and Leigh Syndrome With MT-ND3 Mutation, Particularly the m.10191T>C Point Mutation.

Authors:  Ji-Hoon Na; Min Jung Lee; Chul Ho Lee; Young-Mock Lee
Journal:  Front Neurol       Date:  2021-12-10       Impact factor: 4.003

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