Literature DB >> 26525346

Privacy-Preserving Data Sharing for Genome-Wide Association Studies.

Caroline Uhlerop1, Aleksandra Slavković2, Stephen E Fienberg3.   

Abstract

Entities:  

Year:  2013        PMID： 26525346      PMCID： PMC4623434     

Source DB:  PubMed          Journal:  J Priv Confid


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  15 in total

1.  Penalized logistic regression for detecting gene interactions.

Authors:  Mee Young Park; Trevor Hastie
Journal:  Biostatistics       Date:  2007-04-11       Impact factor: 5.899

2.  Genetic privacy. Whole-genome data not anonymous, challenging assumptions.

Authors:  Jennifer Couzin
Journal:  Science       Date:  2008-09-05       Impact factor: 47.728

3.  Simulating association studies: a data-based resampling method for candidate regions or whole genome scans.

Authors:  Fred A Wright; Hanwen Huang; Xiaojun Guan; Kevin Gamiel; Clark Jeffries; William T Barry; Fernando Pardo-Manuel de Villena; Patrick F Sullivan; Kirk C Wilhelmsen; Fei Zou
Journal:  Bioinformatics       Date:  2007-09-04       Impact factor: 6.937

4.  Anonymization of electronic medical records for validating genome-wide association studies.

Authors:  Grigorios Loukides; Aris Gkoulalas-Divanis; Bradley Malin
Journal:  Proc Natl Acad Sci U S A       Date:  2010-04-12       Impact factor: 11.205

5.  Differentially Private Empirical Risk Minimization.

Authors:  Kamalika Chaudhuri; Claire Monteleoni; Anand D Sarwate
Journal:  J Mach Learn Res       Date:  2011-03       Impact factor: 3.654

6.  On inferring presence of an individual in a mixture: a Bayesian approach.

Authors:  David Clayton
Journal:  Biostatistics       Date:  2010-06-03       Impact factor: 5.899

7.  Coat variation in the domestic dog is governed by variants in three genes.

Authors:  Edouard Cadieu; Mark W Neff; Pascale Quignon; Kari Walsh; Kevin Chase; Heidi G Parker; Bridgett M Vonholdt; Alison Rhue; Adam Boyko; Alexandra Byers; Aaron Wong; Dana S Mosher; Abdel G Elkahloun; Tyrone C Spady; Catherine André; K Gordon Lark; Michelle Cargill; Carlos D Bustamante; Robert K Wayne; Elaine A Ostrander
Journal:  Science       Date:  2009-08-27       Impact factor: 47.728

8.  Public access to genome-wide data: five views on balancing research with privacy and protection.

Authors:  George Church; Catherine Heeney; Naomi Hawkins; Jantina de Vries; Paula Boddington; Jane Kaye; Martin Bobrow; Bruce Weir
Journal:  PLoS Genet       Date:  2009-10-02       Impact factor: 5.917

9.  The limits of individual identification from sample allele frequencies: theory and statistical analysis.

Authors:  Peter M Visscher; William G Hill
Journal:  PLoS Genet       Date:  2009-10-02       Impact factor: 5.917

10.  Resolving individuals contributing trace amounts of DNA to highly complex mixtures using high-density SNP genotyping microarrays.

Authors:  Nils Homer; Szabolcs Szelinger; Margot Redman; David Duggan; Waibhav Tembe; Jill Muehling; John V Pearson; Dietrich A Stephan; Stanley F Nelson; David W Craig
Journal:  PLoS Genet       Date:  2008-08-29       Impact factor: 5.917
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  17 in total

Review 1.  Privacy challenges and research opportunities for genomic data sharing.

Authors:  Luca Bonomi; Yingxiang Huang; Lucila Ohno-Machado
Journal:  Nat Genet       Date:  2020-06-29       Impact factor: 38.330

2.  Scalable privacy-preserving data sharing methodology for genome-wide association studies.

Authors:  Fei Yu; Stephen E Fienberg; Aleksandra B Slavković; Caroline Uhler
Journal:  J Biomed Inform       Date:  2014-02-06       Impact factor: 6.317

3.  One Size Doesn't Fit All: Measuring Individual Privacy in Aggregate Genomic Data.

Authors:  Sean Simmons; Bonnie Berger
Journal:  Proc IEEE Symp Secur Priv Workshops       Date:  2015-07-20

Review 4.  Privacy-preserving techniques of genomic data-a survey.

Authors:  Md Momin Al Aziz; Md Nazmus Sadat; Dima Alhadidi; Shuang Wang; Xiaoqian Jiang; Cheryl L Brown; Noman Mohammed
Journal:  Brief Bioinform       Date:  2019-05-21       Impact factor: 11.622

5.  Big Data Privacy in Biomedical Research.

Authors:  Shuang Wang; Luca Bonomi; Wenrui Dai; Feng Chen; Cynthia Cheung; Cinnamon S Bloss; Samuel Cheng; Xiaoqian Jiang
Journal:  IEEE Trans Big Data       Date:  2016-09-13

Review 6.  Functional genomics data: privacy risk assessment and technological mitigation.

Authors:  Gamze Gürsoy; Tianxiao Li; Susanna Liu; Eric Ni; Charlotte M Brannon; Mark B Gerstein
Journal:  Nat Rev Genet       Date:  2021-11-10       Impact factor: 53.242

7.  Privacy-Preserving and Efficient Verification of the Outcome in Genome-Wide Association Studies.

Authors:  Anisa Halimi; Leonard Dervishi; Erman Ayday; Apostolos Pyrgelis; Juan Ramón Troncoso-Pastoriza; Jean-Pierre Hubaux; Xiaoqian Jiang; Jaideep Vaidya
Journal:  Proc Priv Enhanc Technol       Date:  2022

8.  Enabling Privacy-Preserving GWASs in Heterogeneous Human Populations.

Authors:  Sean Simmons; Cenk Sahinalp; Bonnie Berger
Journal:  Cell Syst       Date:  2016-07-21       Impact factor: 10.304

Review 9.  Genome privacy: challenges, technical approaches to mitigate risk, and ethical considerations in the United States.

Authors:  Shuang Wang; Xiaoqian Jiang; Siddharth Singh; Rebecca Marmor; Luca Bonomi; Dov Fox; Michelle Dow; Lucila Ohno-Machado
Journal:  Ann N Y Acad Sci       Date:  2016-09-28       Impact factor: 5.691

10.  Mechanisms to protect the privacy of families when using the transmission disequilibrium test in genome-wide association studies.

Authors:  Meng Wang; Zhanglong Ji; Shuang Wang; Jihoon Kim; Hai Yang; Xiaoqian Jiang; Lucila Ohno-Machado
Journal:  Bioinformatics       Date:  2017-12-01       Impact factor: 6.937
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