Literature DB >> 26525194

Efficient genomic correction methods in human iPS cells using CRISPR-Cas9 system.

Hongmei Lisa Li1, Peter Gee1, Kentaro Ishida2, Akitsu Hotta3.   

Abstract

Precise gene correction using the CRISPR-Cas9 system in human iPS cells holds great promise for various applications, such as the study of gene functions, disease modeling, and gene therapy. In this review article, we summarize methods for effective editing of genomic sequences of iPS cells based on our experiences correcting dystrophin gene mutations with the CRISPR-Cas9 system. Designing specific sgRNAs as well as having efficient transfection methods and proper detection assays to assess genomic cleavage activities are critical for successful genome editing in iPS cells. In addition, because iPS cells are fragile by nature when dissociated into single cells, a step-by-step confirmation during the cell recovery process is recommended to obtain an adequate number of genome-edited iPS cell clones. We hope that the techniques described here will be useful for researchers from diverse backgrounds who would like to perform genome editing in iPS cells.
Copyright © 2015 The Authors. Published by Elsevier Inc. All rights reserved.

Entities:  

Keywords:  CRISPR; Gene correction; Genome editing; Knock-in; Knock-out; iPS cells

Mesh:

Year:  2015        PMID: 26525194     DOI: 10.1016/j.ymeth.2015.10.015

Source DB:  PubMed          Journal:  Methods        ISSN: 1046-2023            Impact factor:   3.608


  22 in total

Review 1.  From the raw bar to the bench: Bivalves as models for human health.

Authors:  José A Fernández Robledo; Raghavendra Yadavalli; Bassem Allam; Emmanuelle Pales Espinosa; Marco Gerdol; Samuele Greco; Rebecca J Stevick; Marta Gómez-Chiarri; Ying Zhang; Cynthia A Heil; Adrienne N Tracy; David Bishop-Bailey; Michael J Metzger
Journal:  Dev Comp Immunol       Date:  2018-11-29       Impact factor: 3.636

Review 2.  Application of human induced pluripotent stem cells to model fibrodysplasia ossificans progressiva.

Authors:  Emilie Barruet; Edward C Hsiao
Journal:  Bone       Date:  2017-07-14       Impact factor: 4.398

3.  Generation of iPSC-derived Human Brain Organoids to Model Early Neurodevelopmental Disorders.

Authors:  Elke Gabriel; Jay Gopalakrishnan
Journal:  J Vis Exp       Date:  2017-04-14       Impact factor: 1.355

Review 4.  Epigenetic Control of Reprogramming and Transdifferentiation by Histone Modifications.

Authors:  Hua Qin; Andong Zhao; Cuiping Zhang; Xiaobing Fu
Journal:  Stem Cell Rev Rep       Date:  2016-12       Impact factor: 5.739

Review 5.  Updated summary of genome editing technology in human cultured cells linked to human genetics studies.

Authors:  Tatsuo Miyamoto; Silvia Natsuko Akutsu; Shinya Matsuura
Journal:  J Hum Genet       Date:  2017-10-11       Impact factor: 3.172

6.  Trapping of CDC42 C-terminal variants in the Golgi drives pyrin inflammasome hyperactivation.

Authors:  Masahiko Nishitani-Isa; Kojiro Mukai; Yoshitaka Honda; Hiroshi Nihira; Takayuki Tanaka; Hirofumi Shibata; Kumi Kodama; Eitaro Hiejima; Kazushi Izawa; Yuri Kawasaki; Mitsujiro Osawa; Yu Katata; Sachiko Onodera; Tatsuya Watanabe; Takashi Uchida; Shigeo Kure; Junko Takita; Osamu Ohara; Megumu K Saito; Ryuta Nishikomori; Tomohiko Taguchi; Yoji Sasahara; Takahiro Yasumi
Journal:  J Exp Med       Date:  2022-04-28       Impact factor: 17.579

7.  PKD1-Dependent Renal Cystogenesis in Human Induced Pluripotent Stem Cell-Derived Ureteric Bud/Collecting Duct Organoids.

Authors:  Shohei Kuraoka; Shunsuke Tanigawa; Atsuhiro Taguchi; Akitsu Hotta; Hitoshi Nakazato; Kenji Osafune; Akio Kobayashi; Ryuichi Nishinakamura
Journal:  J Am Soc Nephrol       Date:  2020-08-03       Impact factor: 10.121

8.  Site-specific randomization of the endogenous genome by a regulatable CRISPR-Cas9 piggyBac system in human cells.

Authors:  Kentaro Ishida; Huaigeng Xu; Noriko Sasakawa; Mandy Siu Yu Lung; Julia Alexandra Kudryashev; Peter Gee; Akitsu Hotta
Journal:  Sci Rep       Date:  2018-01-10       Impact factor: 4.379

9.  USH2A Gene Editing Using the CRISPR System.

Authors:  Carla Fuster-García; Gema García-García; Elisa González-Romero; Teresa Jaijo; María D Sequedo; Carmen Ayuso; Rafael P Vázquez-Manrique; José M Millán; Elena Aller
Journal:  Mol Ther Nucleic Acids       Date:  2017-08-12       Impact factor: 8.886

Review 10.  In vivo methods for acute modulation of gene expression in the central nervous system.

Authors:  Andrzej W Cwetsch; Bruno Pinto; Annalisa Savardi; Laura Cancedda
Journal:  Prog Neurobiol       Date:  2018-04-22       Impact factor: 11.685

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